Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.9e-287 991.9 522 100.0
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.9e-287 991.9 522 100.0
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 8.2e-267 923.3 522 91.0
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 7.7e-257 890.2 522 86.8
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 9.4e-255 883.2 522 85.2
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 2.7e-249 865.1 520 84.2
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 8.6e-248 860.1 522 83.7
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 3.3e-247 858.2 518 84.9
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 4.2e-247 857.8 522 83.9
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 1.2e-246 856.3 522 83.0
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 6.8e-245 850.5 517 84.7
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 6.8e-245 850.5 517 83.8
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 8.9e-245 850.1 522 83.3
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 4.9e-243 844.3 520 83.1
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 4.9e-243 844.3 522 82.8
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 1.4e-242 842.8 517 83.0
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 1.2e-241 839.7 522 83.1
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 3.5e-241 838.2 522 81.2
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 5.9e-241 837.4 519 82.3
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 1.3e-240 836.3 522 82.2
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 2.9e-240 835.1 518 82.4
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 1.9e-239 832.4 519 81.9
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 1.9e-239 832.4 521 81.8
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 1.9e-239 832.4 523 80.9
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 2.5e-239 832.0 522 80.5
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 3.3e-239 831.6 522 82.4
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 4.3e-239 831.2 522 80.8
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 9.5e-239 830.1 517 81.4
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 1.6e-238 829.3 522 81.2
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 2.1e-238 828.9 522 80.7
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 2.1e-238 828.9 522 79.9
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 2.8e-238 828.6 528 80.1
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 4.7e-238 827.8 516 81.6
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 1.8e-237 825.9 523 80.5
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 4.0e-237 824.7 517 81.0
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 8.9e-237 823.5 516 81.4
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 8.9e-237 823.5 520 80.6
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 1.2e-236 823.2 522 80.3
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 1.2e-236 823.2 522 78.9
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 1.5e-236 822.8 518 80.3
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 4.4e-236 821.2 523 80.3
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 7.5e-236 820.5 522 80.7
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 1.7e-235 819.3 522 78.9
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 3.7e-235 818.1 522 80.3
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 4.9e-235 817.8 517 81.4
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 6.4e-235 817.4 522 79.5
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.4e-234 816.2 517 81.2
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 1.8e-234 815.8 522 79.1
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 4.1e-234 814.7 523 80.1
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 4.1e-234 814.7 517 80.9
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 4.1e-234 814.7 519 80.5
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 9.2e-234 813.5 523 79.9
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 1.0e-232 810.1 519 79.8
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 1.7e-232 809.3 522 78.0
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 1.7e-232 809.3 518 78.4
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 2.3e-232 808.9 522 78.5
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 5.0e-232 807.7 522 78.4
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 8.6e-232 807.0 522 78.4
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 1.9e-231 805.8 522 77.8
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 1.9e-231 805.8 519 77.8
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 2.5e-231 805.4 522 78.0
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 3.3e-231 805.1 523 79.2
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 1.2e-230 803.1 520 78.1
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 3.1e-229 798.5 518 77.6
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 8.9e-229 797.0 518 77.4
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 2.0e-228 795.8 521 77.0
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.6e-228 795.4 543 76.6
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 2.6e-228 795.4 518 78.2
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 3.4e-228 795.0 523 78.8
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 1.3e-227 793.1 518 78.0
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 2.2e-227 792.3 520 78.1
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 3.7e-227 791.6 518 77.4
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 4.9e-227 791.2 516 79.1
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 6.4e-227 790.8 522 76.8
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 1.9e-226 789.3 518 77.2
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 3.2e-226 788.5 519 77.5
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 4.1e-226 788.1 522 78.2
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 7.0e-226 787.3 519 77.3
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 9.2e-226 786.9 519 77.3
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 2.0e-225 785.8 614 69.2
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 3.5e-225 785.0 518 77.0
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 4.6e-225 784.6 519 77.5
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 6.6e-224 780.8 522 77.0
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 2.8e-222 775.4 522 77.2
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 6.2e-222 774.2 522 76.8
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 4.4e-220 768.1 522 74.1
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 5.6e-215 751.1 535 74.4
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 8.9e-213 743.8 535 73.3
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.6e-212 742.3 504 77.0
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 9.9e-212 740.3 522 73.2
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 4.1e-210 734.9 518 72.2
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 1.6e-209 733.0 521 72.7
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 6.0e-209 731.1 545 73.4
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 2.3e-208 729.2 683 60.0
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 6.2e-206 721.1 522 71.8
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 2.1e-198 696.0 519 71.5
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 4.0e-197 691.8 427 81.5
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 1.3e-195 686.8 522 68.0
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 2.4e-194 682.6 407 84.5
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 4.2e-186 655.2 517 68.5
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 3.7e-182 642.1 524 65.3
FAN10G1756 Fragaria x ananassa HOM05D004547 ORTHO05D005133 5.0e-171 605.1 449 71.7
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 3.1e-165 585.9 361 80.1
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 5.9e-164 581.6 406 71.2
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 3.3e-159 565.8 533 55.9
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 2.8e-158 562.8 522 55.9
COL.COLO4_14122 Corchorus olitorius HOM05D004547 ORTHO05D005133 1.8e-157 560.1 343 81.9
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 3.8e-139 499.2 521 50.5
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 4.1e-133 479.2 529 48.4
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 3.9e-123 446.0 432 55.3
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 2.3e-120 436.8 294 71.4
SHI14003 Sapria himalayana HOM05D004547 ORTHO05D000023 3.1e-120 436.4 341 66.3
BraA02t06300Z Brassica rapa HOM05D004547 ORTHO05D005133 7.0e-117 425.2 293 76.5
Nitab4.5_0019601g0010 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.7e-110 404.1 264 80.3
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 1.2e-95 354.8 223 77.6
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.4e-88 331.3 228 71.9
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 9.9e-87 325.1 226 71.2
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 5.7e-66 256.1 181 70.7
CDE04G2539 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.4e-64 251.5 269 54.3
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 5.8e-63 246.1 510 32.2
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 7.6e-63 245.7 200 63.5
Os06g0669600 Oryza sativa ssp. japonica HOM05D004547 ORTHO05D005133 1.0e-59 235.3 179 70.4
Actinidia24695 Actinidia chinensis HOM05D004547 ORTHO05D005133 2.4e-56 224.2 182 63.7
QL10p003704 Quercus lobata HOM05D004547 ORTHO05D005133 5.0e-54 216.5 209 63.2
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 8.5e-54 215.7 131 85.5
TPR.G196 Trifolium pratense HOM05D004547 ORTHO05D005133 8.2e-49 199.1 125 81.6
Cre02.g086700 Chlamydomonas reinhardtii HOM05D004547 ORTHO05D005133 4.1e-48 196.8 498 30.1
MD07G1253700 Malus domestica HOM05D004547 ORTHO05D005133 2.0e-42 177.9 105 88.6
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 1.5e-39 168.3 111 82.9
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 4.2e-37 160.2 116 72.4
Psat7g163200 Pisum sativum HOM05D004547 ORTHO05D005133 1.8e-35 154.8 130 61.5
TAR082G0001 Trochodendron aralioides HOM05D004547 ORTHO05D005133 6.7e-35 152.9 97 77.3
Sc14g0005510 Simmondsia chinensis HOM05D004547 ORTHO05D005133 4.4e-34 150.2 95 80.0
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 3.8e-30 137.1 111 67.6
Actinidia01052 Actinidia chinensis HOM05D004547 ORTHO05D005133 8.5e-30 136.0 95 74.7
SEGI_13446 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 1.1e-29 135.6 95 71.6
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 8.3e-25 119.4 176 43.8
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 9.1e-24 115.9 88 65.9
FvH4_7g19100 Fragaria vesca HOM05D004547 ORTHO05D005133 4.5e-23 113.6 92 70.7
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 4.7e-20 103.6 84 64.3
CAN.G689.6 Capsicum annuum HOM05D004547 ORTHO05D005133 6.1e-20 103.2 82 65.9
Duzib147G0620 Durio zibethinus HOM05D004547 ORTHO05D005133 1.4e-19 102.1 92 62.0
SEGI_29591 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 3.0e-19 100.9 99 45.5
Haze_23095 Corylus avellana HOM05D001506 ORTHO05D000455 1.1e-16 92.4 78 67.9
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.4e-16 92.0 57 80.7
FAN06G3837 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.0e-15 88.2 72 66.7
Nitab4.5_0011021g0010 Nicotiana tabacum HOM05D001522 ORTHO05D016189 1.6e-12 78.6 158 37.3
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 2.1e-12 78.2 64 62.5
CAN.G118.7 Capsicum annuum HOM05D004547 ORTHO05D005133 9.8e-10 69.3 58 62.1
Nitab4.5_0008254g0010 Nicotiana tabacum HOM05D017975 ORTHO05D016189 4.9e-09 67.0 126 38.9
Pp3c11_26770 Physcomitrium patens HOM05D004547 ORTHO05D005133 1.2e-07 62.4 73 45.2


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