Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0404F.1_g145380 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 1.6e-177 626.3 400 100.0
Hma1.2p1_0404F.1_g145340 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 6.2e-97 358.6 214 81.3
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 1.1e-77 294.7 204 71.6
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 2.7e-76 290.0 208 68.3
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 3.5e-76 289.7 201 70.1
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 3.3e-74 283.1 211 66.8
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 4.9e-70 269.2 217 60.8
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 2.5e-69 266.9 213 62.0
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 3.2e-69 266.5 210 62.4
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 4.2e-69 266.2 204 63.2
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 7.1e-69 265.4 205 63.4
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 7.1e-69 265.4 204 62.7
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 7.1e-69 265.4 201 65.2
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.1e-68 263.8 269 52.8
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 2.7e-68 263.5 202 62.4
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 3.3e-66 256.5 203 62.6
Ca_12791_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 7.4e-66 255.4 208 58.7
TWI39G0245 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 1.1e-64 251.5 208 61.1
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 1.8e-64 250.8 201 59.7
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 2.4e-64 250.4 205 58.0
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 3.1e-64 250.0 212 61.3
Eucgr.G00143 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.0e-63 247.3 208 59.1
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 2.0e-63 247.3 200 61.0
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 5.9e-63 245.7 200 60.0
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 5.9e-63 245.7 211 59.2
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 7.6e-63 245.4 173 68.2
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 1.7e-62 244.2 201 60.2
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 5.0e-62 242.7 203 61.1
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 5.0e-62 242.7 201 59.7
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 8.5e-62 241.9 210 56.7
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 1.4e-61 241.1 201 59.7
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 1.4e-61 241.1 212 56.1
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 2.5e-61 240.4 201 59.2
Medtr1g007950 Medicago truncatula HOM05D001081 ORTHO05D004708 3.2e-61 240.0 206 59.2
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 9.3e-61 238.4 216 56.0
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 1.6e-60 237.7 211 58.3
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 2.1e-60 237.3 201 58.7
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 2.7e-60 236.9 202 58.4
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 4.6e-60 236.1 201 58.7
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 4.6e-60 236.1 200 55.5
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 1.0e-59 235.0 200 58.0
Cpa.g.sc3.91 Carica papaya HOM05D001081 ORTHO05D004708 1.3e-59 234.6 210 54.8
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 8.7e-59 231.9 202 60.9
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 8.7e-59 231.9 205 55.6
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 1.1e-58 231.5 202 57.9
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 1.5e-58 231.1 203 59.6
Sabra15G0068100 Salix brachista HOM05D001081 ORTHO05D004708 1.5e-58 231.1 203 59.6
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 9.7e-58 228.4 200 57.0
Eucgr.G00111 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.6e-57 227.6 207 56.0
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 2.8e-57 226.9 207 55.1
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 3.7e-57 226.5 213 54.0
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 3.7e-57 226.5 213 54.0
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 6.3e-57 225.7 213 53.5
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 6.3e-57 225.7 200 55.0
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 6.3e-57 225.7 203 56.2
Eucgr.H05016 Eucalyptus grandis HOM05D001081 ORTHO05D004708 8.2e-57 225.3 207 55.6
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 1.8e-56 224.2 200 55.0
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 1.2e-55 221.5 204 54.4
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 2.0e-55 220.7 183 60.7
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 2.6e-55 220.3 201 54.2
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 2.6e-55 220.3 201 54.2
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 2.6e-55 220.3 201 54.2
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 2.6e-55 220.3 200 56.0
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 2.6e-55 220.3 191 56.5
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 5.9e-55 219.2 200 54.5
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 1.3e-54 218.0 201 53.7
Eucgr.G00092 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.2e-54 217.2 207 54.6
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 3.8e-54 216.5 204 52.5
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 6.5e-54 215.7 204 52.5
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 2.5e-53 213.8 227 49.8
Nitab4.5_0006933g0040 Nicotiana tabacum HOM05D001081 ORTHO05D004708 2.1e-52 210.7 178 61.2
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 2.7e-52 210.3 203 52.7
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 1.8e-51 207.6 211 51.7
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 3.9e-51 206.5 208 52.4
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 5.1e-51 206.1 206 52.4
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 2.0e-50 204.1 226 47.8
PSO170G6091 Papaver somniferum HOM05D001081 ORTHO05D004708 4.4e-50 203.0 193 53.9
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 2.2e-49 200.7 200 51.0
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 4.8e-49 199.5 219 50.2
HanXRQChr08g0225341 Helianthus annuus HOM05D001081 ORTHO05D004708 2.5e-45 187.2 204 47.1
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 3.2e-45 186.8 241 43.2
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 7.9e-44 182.2 202 48.0
FvH4_7g31511 Fragaria vesca HOM05D001081 ORTHO05D004708 3.9e-43 179.9 159 55.3
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 2.8e-41 173.7 104 82.7
CARHR189250 Cardamine hirsuta HOM05D001081 ORTHO05D004708 3.7e-41 173.3 202 48.0
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 4.1e-40 169.9 203 45.8
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 1.5e-37 161.4 202 44.1
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 1.9e-37 161.0 201 46.3
Solyc03g083120.3 Solanum lycopersicum HOM05D001081 ORTHO05D024756 1.9e-37 161.0 139 57.6
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 8.0e-36 155.6 100 74.0
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 1.5e-34 151.4 102 73.5
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 2.0e-34 151.0 109 69.7
SGA_v2.0_scaffold9G04846 Striga asiatica HOM05D001081 ORTHO05D004708 2.6e-34 150.6 110 69.1
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 7.5e-34 149.1 98 70.4
Aa31LG11G3510 Aethionema arabicum HOM05D001081 ORTHO05D004708 1.7e-33 147.9 99 71.7
Peaxi162Scf00740g00140 Petunia axillaris HOM05D001081 ORTHO05D024756 4.8e-33 146.4 150 50.0
HanXRQChr10g0291811 Helianthus annuus HOM05D001081 ORTHO05D004708 6.3e-33 146.0 98 72.4
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 1.8e-32 144.4 98 73.5
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 1.8e-32 144.4 98 73.5
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 1.1e-29 135.2 212 39.2
Migut.F00208 Erythranthe guttata HOM05D001081 ORTHO05D004708 6.1e-28 129.4 132 50.0
SMO213G0001 Selaginella moellendorffii HOM05D001081 ORTHO05D004708 1.2e-26 125.2 205 36.6
Mapoly0111s0028 Marchantia polymorpha HOM05D001081 ORTHO05D004708 1.5e-26 124.8 197 38.1
Carub.0006s2204 Capsella rubella HOM05D001081 ORTHO05D024756 2.6e-26 124.0 138 46.4
Actinidia04725 Actinidia chinensis HOM05D001081 ORTHO05D004708 4.1e-24 116.7 77 71.4
SEGI_15117 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 1.6e-23 114.8 154 42.2
AagrBONN_evm.TU.Sc2ySwM_117.3719 Anthoceros agrestis HOM05D001081 ORTHO05D004708 2.9e-22 110.5 203 36.5
Actinidia27675 Actinidia chinensis HOM05D001081 ORTHO05D004708 6.5e-22 109.4 71 74.6
AagrBONN_evm.TU.Sc2ySwM_228.1615 Anthoceros agrestis HOM05D001081 ORTHO05D004708 1.5e-21 108.2 205 36.1
Hma1.2p1_1001F.1_g246500 Hydrangea macrophylla HOM05D028317 ORTHO05D004708 2.8e-20 104.0 65 83.1
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 1.4e-19 101.7 70 67.1
Hma1.2p1_1478F.1_g285980 Hydrangea macrophylla HOM05D028317 ORTHO05D004708 3.0e-19 100.5 65 81.5
Hma1.2p1_0163F.1_g072780 Hydrangea macrophylla HOM05D000560 ORTHO05D000417 4.0e-19 100.1 63 84.1
Hma1.2p1_1001F.1_g246510 Hydrangea macrophylla HOM05D028317 ORTHO05D004708 8.8e-19 99.0 68 77.9
Pp3c22_17807 Physcomitrium patens HOM05D001081 ORTHO05D004708 2.6e-18 97.4 183 36.1
Aqoxy4G01594 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 3.7e-17 93.6 71 69.0
Actinidia04689 Actinidia chinensis HOM05D001081 ORTHO05D004708 6.3e-17 92.8 58 77.6
Hma1.2p1_0305F.1_g119590 Hydrangea macrophylla HOM05D028317 ORTHO05D004708 6.3e-17 92.8 67 76.1
Hma1.2p1_0013F.1_g008960 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 3.1e-16 90.5 48 87.5
Dinv08524 Davidia involucrata HOM05D001081 ORTHO05D004708 5.9e-15 86.3 86 52.3
Lalb_Chr10g0091351 Lupinus albus HOM05D001081 ORTHO05D004708 3.8e-14 83.6 94 44.7
Dinv14135 Davidia involucrata HOM05D000560 ORTHO05D000417 3.3e-13 80.5 58 70.7
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 4.7e-12 76.6 51 70.6
Peaxi162Scf00042g01214 Petunia axillaris HOM05D000560 ORTHO05D000417 1.0e-11 75.5 58 69.0
Actinidia32027 Actinidia chinensis HOM05D000560 ORTHO05D000417 2.3e-11 74.3 56 66.1
CSS0005017 Camellia sinensis var. sinensis HOM05D000560 ORTHO05D000417 5.2e-11 73.2 61 57.4
Nitab4.5_0001215g0020 Nicotiana tabacum HOM05D000560 ORTHO05D000417 2.0e-10 71.2 58 65.5
Nitab4.5_0002834g0010 Nicotiana tabacum HOM05D000560 ORTHO05D000417 2.0e-10 71.2 58 65.5
Sopen10g025480 Solanum pennellii HOM05D000560 ORTHO05D000417 2.6e-10 70.9 58 65.5
PGSC0003DMG400018938 Solanum tuberosum HOM05D000560 ORTHO05D000417 2.6e-10 70.9 58 65.5
Oeu029654.3 Olea europaea HOM05D000560 ORTHO05D000417 3.4e-10 70.5 58 63.8
Solyc10g055710.2 Solanum lycopersicum HOM05D000560 ORTHO05D000417 9.8e-10 68.9 58 63.8
Lj9C401G13 Lonicera japonica HOM05D000560 ORTHO05D002341 4.9e-09 66.6 61 55.7
Oeu015552.1 Olea europaea HOM05D000560 ORTHO05D000417 1.1e-08 65.5 58 62.1
Rhsim05G0052300 Rhododendron simsii HOM05D000560 ORTHO05D000417 1.4e-08 65.1 57 61.4
AUR62000987 Chenopodium quinoa HOM05D001081 ORTHO05D004708 1.8e-08 64.7 44 75.0
Migut.B00044 Erythranthe guttata HOM05D000560 ORTHO05D000417 1.8e-08 64.7 58 60.3
Lj5A175T97 Lonicera japonica HOM05D000560 ORTHO05D000417 5.4e-08 63.2 60 53.3
CSS0049263 Camellia sinensis var. sinensis HOM05D000560 ORTHO05D000417 7.0e-08 62.8 58 53.4
SalBow1G5931 Salvia bowleyana HOM05D000560 ORTHO05D000417 7.0e-08 62.8 50 62.0
SGA_v2.0_scaffold32G13316 Striga asiatica HOM05D000560 ORTHO05D000417 2.7e-07 60.8 50 56.0
HanXRQChr06g0165641 Helianthus annuus HOM05D001081 ORTHO05D024756 3.5e-07 60.5 36 75.0
HanXRQChr08g0231511 Helianthus annuus HOM05D001081 ORTHO05D024756 3.5e-07 60.5 36 75.0
TWI79G0299 Tripterygium wilfordii HOM05D000560 ORTHO05D000417 1.7e-06 58.2 60 58.3
TWI75G0516 Tripterygium wilfordii HOM05D000560 ORTHO05D000417 2.3e-06 57.8 60 58.3
Cpa.g.sc99.28 Carica papaya HOM05D001081 ORTHO05D004708 3.0e-06 57.4 59 49.2
Peaxi162Scf01290g00014 Petunia axillaris HOM05D000088 ORTHO05D000417 3.0e-06 57.4 52 61.5
vmacro17333 Vaccinium macrocarpon HOM05D000560 ORTHO05D000417 3.9e-06 57.0 57 59.6
THA.LOC104807383 Tarenaya hassleriana HOM05D000560 ORTHO05D000417 6.6e-06 56.2 58 58.6
vmacro17331 Vaccinium macrocarpon HOM05D000560 ORTHO05D000417 8.6e-06 55.8 46 63.0


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