Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.0e-46 188.7 96 100.0
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 7.5e-41 170.2 96 88.5
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 1.1e-39 166.4 95 85.3
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 4.1e-39 164.5 96 86.5
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.1e-39 164.5 94 88.3
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 2.0e-38 162.2 96 86.5
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 7.8e-38 160.2 96 83.3
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.7e-37 159.1 94 84.0
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 2.3e-37 158.7 94 84.0
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 3.9e-37 157.9 94 80.9
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.9e-37 157.9 97 83.5
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.9e-37 157.9 97 83.5
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 3.9e-37 157.9 96 80.2
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.0e-37 157.5 96 82.3
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 5.0e-37 157.5 97 84.5
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 5.0e-37 157.5 96 81.2
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 5.0e-37 157.5 96 81.2
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 5.0e-37 157.5 96 81.2
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 5.0e-37 157.5 94 84.0
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 5.0e-37 157.5 96 81.2
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 8.6e-37 156.8 90 86.7
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 8.6e-37 156.8 96 81.2
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.1e-36 156.4 96 80.2
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 1.9e-36 155.6 96 80.2
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.9e-36 155.6 97 82.5
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.9e-36 155.6 96 81.2
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 2.5e-36 155.2 96 83.3
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 3.3e-36 154.8 94 78.7
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 3.3e-36 154.8 92 83.7
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 5.6e-36 154.1 96 82.3
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 9.5e-36 153.3 94 79.8
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 9.5e-36 153.3 94 80.9
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.2e-35 152.9 97 80.4
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.2e-35 152.9 94 79.8
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.2e-35 152.9 94 79.8
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.6e-35 152.5 96 78.1
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.6e-35 152.5 96 78.1
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 2.1e-35 152.1 92 81.5
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.1e-35 152.1 94 79.8
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 80.2
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.8e-35 151.8 96 80.2
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 3.6e-35 151.4 96 78.1
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 3.6e-35 151.4 93 77.4
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 3.6e-35 151.4 96 77.1
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 3.6e-35 151.4 93 78.5
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.7e-35 151.0 96 77.1
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 6.1e-35 150.6 96 77.1
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 8.0e-35 150.2 96 81.2
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 8.0e-35 150.2 96 78.1
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.0e-34 149.8 95 76.8
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 1.8e-34 149.1 84 89.3
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 1.8e-34 149.1 96 78.1
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.8e-34 149.1 92 79.3
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.8e-34 149.1 93 77.4
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 2.3e-34 148.7 96 77.1
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 3.1e-34 148.3 96 77.1
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 5.2e-34 147.5 94 77.7
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 77.1
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 75.0
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 8.9e-34 146.7 96 77.1
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 3.4e-33 144.8 96 77.1
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 3.4e-33 144.8 96 77.1
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 3.4e-33 144.8 97 76.3
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 75.0
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 9.8e-33 143.3 96 75.0
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 8.3e-32 140.2 97 72.2
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 8.3e-32 140.2 97 72.2
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 8.3e-32 140.2 97 72.2
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 1.1e-31 139.8 95 74.7
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 1.1e-31 139.8 96 70.8
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.2e-31 138.3 96 70.8
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 3.2e-31 138.3 93 72.0
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 7.0e-31 137.1 69 100.0
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 9.2e-31 136.7 92 71.7
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 2.0e-30 135.6 96 67.7
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 2.0e-30 135.6 93 72.0
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 4.6e-30 134.4 97 69.1
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 1.3e-29 132.9 86 75.6
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 1.7e-29 132.5 92 71.7
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 2.3e-29 132.1 94 71.3
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 5.6e-28 127.5 87 69.0
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.2e-27 126.3 75 81.3
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.2e-27 126.3 125 56.0
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 4.7e-27 124.4 87 71.3
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 6.2e-27 124.0 87 71.3
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 6.2e-27 124.0 86 74.4
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 8.0e-27 123.6 94 62.8
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 8.0e-27 123.6 94 62.8
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 8.0e-27 123.6 94 62.8
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 8.0e-27 123.6 94 62.8
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 2.3e-26 122.1 97 67.0
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 5.2e-26 120.9 89 69.7
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 6.8e-26 120.6 94 61.7
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 8.9e-26 120.2 94 61.7
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.2e-25 119.8 73 76.7
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.0e-25 119.0 75 73.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 5.8e-25 117.5 84 70.2
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 9.8e-25 116.7 84 67.9
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.3e-24 116.3 91 65.9
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 2.9e-24 115.2 71 83.1
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 8.3e-24 113.6 92 65.2
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.1e-23 111.3 68 77.9
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 2.1e-22 109.0 83 63.9
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 2.5e-20 102.1 67 79.1
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 2.8e-19 98.6 94 52.1
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.3e-18 95.5 97 54.6
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 9.2e-15 83.6 67 61.2
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 6.0e-14 80.9 50 78.0
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 7.1e-07 57.4 94 42.6
Sabra11G0008100 Salix brachista HOM05D000015 ORTHO05D009146 1.2e-06 56.6 57 50.9
HanXRQChr15g0470561 Helianthus annuus HOM05D000015 ORTHO05D009146 1.6e-06 56.2 57 50.9
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 2.1e-06 55.8 57 52.6
Lj1A1236G69 Lonicera japonica HOM05D000015 ORTHO05D009146 2.1e-06 55.8 77 41.6
Dinv13936 Davidia involucrata HOM05D000015 ORTHO05D009146 3.5e-06 55.1 57 50.9
Manes.17G027600 Manihot esculenta HOM05D000015 ORTHO05D009146 4.6e-06 54.7 79 41.8


User provided reference genes

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