Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 3.9e-31 139.4 191 100.0
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 4.0e-12 76.3 61 63.9
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 2.0e-11 73.9 62 62.9
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 5.8e-11 72.4 62 61.3
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 1.1e-09 68.2 61 59.0
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 1.4e-09 67.8 56 66.1
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 3.2e-09 66.6 62 64.5
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 5.4e-09 65.9 59 59.3
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.2e-08 64.7 54 64.8
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 1.6e-08 64.3 63 58.7
TAR376G0088 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.1e-08 63.9 51 68.6
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 4.6e-08 62.8 55 60.0
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 7.8e-08 62.0 61 47.5
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 7.8e-08 62.0 61 47.5
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.0e-07 61.6 61 47.5
QL06p040048 Quercus lobata HOM05D008343 ORTHO05D009841 1.0e-07 61.6 65 49.2
Eucgr.H01292 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.3e-07 61.2 61 45.9
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.3e-07 61.2 61 47.5
Lalb_Chr05g0226171 Lupinus albus HOM05D008343 ORTHO05D009841 1.7e-07 60.8 57 52.6
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 1.7e-07 60.8 54 57.4
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 3.9e-07 59.7 63 54.0
Potri.007G049400 Populus trichocarpa HOM05D008343 ORTHO05D009841 6.6e-07 58.9 58 56.9
THA.LOC109116433 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 6.6e-07 58.9 64 51.6
THA.LOC104807602 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 8.6e-07 58.5 64 51.6
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 8.6e-07 58.5 59 55.9
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.1e-06 58.2 61 47.5
TAR376G1160 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.9e-06 57.4 51 62.7
Carub.0007s0300 Capsella rubella HOM05D008734 ORTHO05D010780 2.5e-06 57.0 59 50.8
Manes.12G110633 Manihot esculenta HOM05D008343 ORTHO05D009841 2.5e-06 57.0 60 53.3
THA.LOC104813832 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 2.5e-06 57.0 59 49.2
AT4G37290 Arabidopsis thaliana HOM05D008734 ORTHO05D010780 3.3e-06 56.6 64 50.0
AL7G13562 Arabidopsis lyrata HOM05D008734 ORTHO05D010780 4.3e-06 56.2 59 50.8
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 4.3e-06 56.2 54 57.4
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 5.6e-06 55.8 61 45.9
Eucgr.H02243 Eucalyptus grandis HOM05D008343 ORTHO05D009841 5.6e-06 55.8 61 45.9
BolC3t20197H Brassica oleracea HOM05D008734 ORTHO05D010780 7.3e-06 55.5 45 55.6
Peaxi162Scf00365g00051 Petunia axillaris HOM05D011430 ORTHO05D009841 7.3e-06 55.5 61 55.7
Aa31LG6G14150 Aethionema arabicum HOM05D008734 ORTHO05D010780 9.6e-06 55.1 59 52.5
BcaC01g00413 Brassica carinata HOM05D008734 ORTHO05D010780 9.6e-06 55.1 59 47.5
C03p79450 Brassica napus HOM05D008734 ORTHO05D010780 9.6e-06 55.1 59 47.5
BraA08t34221Z Brassica rapa HOM05D008734 ORTHO05D010780 9.6e-06 55.1 59 47.5
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 9.6e-06 55.1 61 45.9
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 9.6e-06 55.1 60 55.0


User provided reference genes

Program Settings