Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0210F.1_g089750 Hydrangea macrophylla HOM05D001811 ORTHO05D228137 1.0e-49 199.9 111 100.0
Hma1.2p1_0717F.1_g208180 Hydrangea macrophylla HOM05D018505 ORTHO05D228097 1.1e-16 90.1 108 56.5
Hma1.2p1_2198F.1_g316920 Hydrangea macrophylla HOM05D001811 ORTHO05D001738 4.5e-13 78.2 93 53.8
Hma1.2p1_1187F.1_g265150 Hydrangea macrophylla HOM05D001811 ORTHO05D001738 6.5e-12 74.3 93 51.6
Nitab4.5_0000978g0110 Nicotiana tabacum HOM05D001811 ORTHO05D001738 6.5e-12 74.3 79 58.2
CiPaw.01G105300 Carya illinoinensis HOM05D001811 ORTHO05D001738 2.5e-11 72.4 80 55.0
Gohir.D10G131300 Gossypium hirsutum HOM05D001811 ORTHO05D001738 2.5e-11 72.4 70 61.4
Gorai.011G144900 Gossypium raimondii HOM05D001811 ORTHO05D001738 2.5e-11 72.4 70 61.4
Nitab4.5_0002466g0030 Nicotiana tabacum HOM05D001811 ORTHO05D001738 4.2e-11 71.6 79 62.0
Actinidia35897 Actinidia chinensis HOM05D001811 ORTHO05D001738 5.5e-11 71.2 89 52.8
Manes.04G050100 Manihot esculenta HOM05D001811 ORTHO05D001738 9.4e-11 70.5 81 54.3
QL10p046375 Quercus lobata HOM05D001811 ORTHO05D001738 9.4e-11 70.5 75 54.7
CiPaw.02G057100 Carya illinoinensis HOM05D001811 ORTHO05D001738 1.2e-10 70.1 79 51.9
COL.COLO4_24360 Corchorus olitorius HOM05D001811 ORTHO05D001738 2.1e-10 69.3 65 61.5
RcHm_v2.0_Chr4g0408771 Rosa chinensis HOM05D001811 ORTHO05D001738 2.1e-10 69.3 74 58.1
CSS0012265 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 6.1e-10 67.8 75 53.3
Hund15233 Selenicereus undatus HOM05D001811 ORTHO05D001738 7.9e-10 67.4 75 60.0
vmacro00575 Vaccinium macrocarpon HOM05D001811 ORTHO05D001738 1.8e-09 66.2 69 60.9
arahy.Tifrunner.gnm1.ann1.EJ828S Arachis hypogaea HOM05D001811 ORTHO05D001738 1.1e-08 63.5 75 54.7
arahy.Tifrunner.gnm1.ann1.ET71BL Arachis hypogaea HOM05D001811 ORTHO05D001738 1.1e-08 63.5 75 54.7
THA.LOC104803545 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 1.1e-08 63.5 75 53.3
Glyma.08G362400 Glycine max HOM05D001811 ORTHO05D001738 2.5e-08 62.4 89 46.1
Glyma.18G299500 Glycine max HOM05D001811 ORTHO05D001738 2.5e-08 62.4 89 46.1
MD00G1184300 Malus domestica HOM05D001811 ORTHO05D001738 7.4e-08 60.8 75 52.0
MD04G1031100 Malus domestica HOM05D001811 ORTHO05D001738 9.7e-08 60.5 83 49.4
MELO3C017683.2 Cucumis melo HOM05D001811 ORTHO05D001738 1.3e-07 60.1 94 48.9
Gohir.A10G135400 Gossypium hirsutum HOM05D001811 ORTHO05D001738 1.3e-07 60.1 70 52.9
THA.LOC104802295 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 1.3e-07 60.1 75 53.3
CsaV3_4G003710 Cucumis sativus L. HOM05D001811 ORTHO05D001738 2.2e-07 59.3 77 49.4
Dinv22672 Davidia involucrata HOM05D001811 ORTHO05D001738 2.8e-07 58.9 59 55.9
PGSC0003DMG400004588 Solanum tuberosum HOM05D001811 ORTHO05D001738 2.8e-07 58.9 74 62.2
CANSAT78G0485 Cannabis sativa HOM05D001811 ORTHO05D001738 3.7e-07 58.5 96 42.7
AT3G59290 Arabidopsis thaliana HOM05D001811 ORTHO05D001738 4.8e-07 58.2 78 52.6
arahy.Tifrunner.gnm1.ann1.UP2C0E Arachis hypogaea HOM05D001811 ORTHO05D001738 4.8e-07 58.2 75 48.0
Sabra14G0115100 Salix brachista HOM05D001811 ORTHO05D001738 4.8e-07 58.2 77 49.4
SalBow6G5173 Salvia bowleyana HOM05D001811 ORTHO05D001738 4.8e-07 58.2 87 44.8
Oeu034283.1 Olea europaea HOM05D001811 ORTHO05D001738 6.3e-07 57.8 73 47.9
Solyc12g098740.2 Solanum lycopersicum HOM05D001811 ORTHO05D001738 6.3e-07 57.8 75 60.0
Sopen12g033490 Solanum pennellii HOM05D001811 ORTHO05D001738 6.3e-07 57.8 75 60.0
Actinidia17217 Actinidia chinensis HOM05D001811 ORTHO05D001738 8.2e-07 57.4 87 46.0
ClCG07G016600 Citrullus lanatus HOM05D001811 ORTHO05D001738 8.2e-07 57.4 94 47.9
Nn1g09742 Nelumbo nucifera HOM05D001811 ORTHO05D001738 8.2e-07 57.4 96 49.0
Sabra02G0176300 Salix brachista HOM05D001811 ORTHO05D001738 8.2e-07 57.4 75 48.0
arahy.Tifrunner.gnm1.ann1.VBT4RZ Arachis hypogaea HOM05D001811 ORTHO05D001738 1.4e-06 56.6 75 48.0
Potri.014G151300 Populus trichocarpa HOM05D001811 ORTHO05D001738 1.4e-06 56.6 70 52.9
TAR633G1013 Trochodendron aralioides HOM05D001811 ORTHO05D001738 1.4e-06 56.6 74 48.6
Aa31LG1G24970 Aethionema arabicum HOM05D001811 ORTHO05D001738 1.8e-06 56.2 74 51.4
CAN.G484.125 Capsicum annuum HOM05D001811 ORTHO05D001738 1.8e-06 56.2 42 71.4
Cc03_g11140 Coffea canephora HOM05D001811 ORTHO05D001738 1.8e-06 56.2 74 59.5
Oeu029565.1 Olea europaea HOM05D001811 ORTHO05D001738 1.8e-06 56.2 74 47.3
Oeu061586.1 Olea europaea HOM05D001811 ORTHO05D001738 1.8e-06 56.2 74 47.3
FAN22G1882 Fragaria x ananassa HOM05D001811 ORTHO05D001738 4.1e-06 55.1 74 48.6
Potri.002G231100 Populus trichocarpa HOM05D001811 ORTHO05D001738 4.1e-06 55.1 75 46.7
Thecc.04G182300 Theobroma cacao HOM05D001811 ORTHO05D001738 4.1e-06 55.1 75 52.0
Lalb_Chr17g0335661 Lupinus albus HOM05D001811 ORTHO05D001738 5.3e-06 54.7 78 44.9
unitig_8.g3628 Utricularia gibba HOM05D001811 ORTHO05D001738 5.3e-06 54.7 72 50.0
MSTRG.24589 Avicennia marina HOM05D001811 ORTHO05D001738 6.9e-06 54.3 59 50.8
Sed0006490 Sechium edule HOM05D001811 ORTHO05D001738 9.1e-06 53.9 77 45.5


User provided reference genes

Program Settings