Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0180F.1_g079750 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 4.8e-28 127.1 63 100.0
Hma1.2p1_1569F.1_g291140 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 2.7e-23 111.3 61 90.2
Hma1.2p1_1645F.1_g295350 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 2.7e-23 111.3 61 90.2
Dinv25272 Davidia involucrata HOM05D001459 ORTHO05D001359 2.2e-17 91.7 61 75.4
Hma1.2p1_0870F.1_g230920 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 1.9e-16 88.6 61 73.8
Hma1.2p1_3736F.1_g337430 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 1.6e-15 85.5 61 72.1
Hma1.2p1_0225F.1_g094750 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 6.1e-15 83.6 46 89.1
Hma1.2p1_0308F.1_g120310 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 6.1e-15 83.6 46 89.1
GSVIVG01013053001 Vitis vinifera HOM05D001459 ORTHO05D001359 6.1e-15 83.6 61 67.2
Psat0s1431g0080 Pisum sativum HOM05D001459 ORTHO05D001359 3.9e-14 80.9 61 63.9
Cc08_g03540 Coffea canephora HOM05D001459 ORTHO05D001359 1.1e-13 79.3 55 69.1
Dinv29008 Davidia involucrata HOM05D001459 ORTHO05D001359 1.1e-13 79.3 55 70.9
Atru.chr6.1535 Acer truncatum HOM05D001459 ORTHO05D001359 1.9e-13 78.6 61 63.9
Lalb_Chr09g0325441 Lupinus albus HOM05D001459 ORTHO05D001359 1.9e-13 78.6 61 67.2
CSS0041697 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 4.3e-13 77.4 61 65.6
TPR.G28598 Trifolium pratense HOM05D001459 ORTHO05D001359 4.3e-13 77.4 59 61.0
Medtr5g028850 Medicago truncatula HOM05D001459 ORTHO05D001359 7.4e-13 76.6 59 62.7
CSS0044644 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 1.6e-12 75.5 55 69.1
CANSAT21G2600 Cannabis sativa HOM05D001459 ORTHO05D001359 1.6e-12 75.5 63 61.9
Phvul.002G136000 Phaseolus vulgaris HOM05D001459 ORTHO05D001359 2.2e-12 75.1 61 60.7
Duzib068G0264 Durio zibethinus HOM05D001459 ORTHO05D001359 2.8e-12 74.7 61 60.7
Glyma.01G013600 Glycine max HOM05D001459 ORTHO05D001359 2.8e-12 74.7 61 60.7
arahy.Tifrunner.gnm1.ann1.AFV1R8 Arachis hypogaea HOM05D001459 ORTHO05D001359 3.7e-12 74.3 61 59.0
arahy.Tifrunner.gnm1.ann1.G7EQ73 Arachis hypogaea HOM05D001459 ORTHO05D001359 3.7e-12 74.3 61 59.0
Actinidia14776 Actinidia chinensis HOM05D001459 ORTHO05D001359 4.8e-12 73.9 61 63.9
QL12p001122 Quercus lobata HOM05D001459 ORTHO05D001359 4.8e-12 73.9 62 62.9
Rhsim07G0133000 Rhododendron simsii HOM05D001459 ORTHO05D001359 6.3e-12 73.6 58 63.8
Ciclev10001333m.g Citrus clementina HOM05D001459 ORTHO05D001359 8.2e-12 73.2 59 61.0
Duzib084G0813 Durio zibethinus HOM05D001459 ORTHO05D001359 8.2e-12 73.2 61 60.7
Thecc.03G311000 Theobroma cacao HOM05D001459 ORTHO05D001359 8.2e-12 73.2 61 60.7
TPR.G10365 Trifolium pratense HOM05D001459 ORTHO05D001359 8.2e-12 73.2 59 59.3
Glyma.09G208500 Glycine max HOM05D001459 ORTHO05D001359 1.4e-11 72.4 61 59.0
Lalb_Chr05g0215701 Lupinus albus HOM05D001459 ORTHO05D001359 1.4e-11 72.4 61 62.3
vmacro14206 Vaccinium macrocarpon HOM05D001459 ORTHO05D001359 1.8e-11 72.0 55 65.5
Lalb_Chr16g0381001 Lupinus albus HOM05D001459 ORTHO05D001359 2.4e-11 71.6 61 60.7
Prupe.5G027000 Prunus persica HOM05D001459 ORTHO05D001359 2.4e-11 71.6 61 57.4
PGR042G1020 Punica granatum HOM05D001459 ORTHO05D001359 2.4e-11 71.6 55 60.0
CiPaw.12G068800 Carya illinoinensis HOM05D001459 ORTHO05D001359 3.1e-11 71.2 62 61.3
MD06G1026900 Malus domestica HOM05D001459 ORTHO05D001359 4.1e-11 70.9 61 57.4
Rhsim07G0132900 Rhododendron simsii HOM05D001459 ORTHO05D001359 4.1e-11 70.9 55 63.6
VMungo1215G1612 Vigna mungo HOM05D001459 ORTHO05D001359 9.1e-11 69.7 61 57.4
CiPaw.11G098900 Carya illinoinensis HOM05D001459 ORTHO05D001359 1.2e-10 69.3 66 57.6
Migut.A00608 Erythranthe guttata HOM05D001459 ORTHO05D001359 1.5e-10 68.9 58 60.3
MBI04_g20972_MAGBIO Magnolia biondii HOM05D001459 ORTHO05D001359 1.5e-10 68.9 60 58.3
Nitab4.5_0000179g0100 Nicotiana tabacum HOM05D001459 ORTHO05D001359 1.5e-10 68.9 55 58.2
Solyc08g076100.4 Solanum lycopersicum HOM05D001459 ORTHO05D001359 1.5e-10 68.9 55 60.0
CAN.G773.31 Capsicum annuum HOM05D001459 ORTHO05D001359 2.0e-10 68.6 55 61.8
Glyma.08G265600 Glycine max HOM05D001459 ORTHO05D001359 2.6e-10 68.2 61 57.4
Oeu031080.1 Olea europaea HOM05D001459 ORTHO05D001359 2.6e-10 68.2 56 62.5
Psat4g111720 Pisum sativum HOM05D001459 ORTHO05D001359 2.6e-10 68.2 61 59.0
Sopen08g024750 Solanum pennellii HOM05D001459 ORTHO05D001359 2.6e-10 68.2 55 60.0
Ca_25167_v3 Cicer arietinum L. HOM05D001459 ORTHO05D001359 3.4e-10 67.8 59 59.3
TWI81G0099 Tripterygium wilfordii HOM05D001459 ORTHO05D001359 3.4e-10 67.8 53 58.5
MSTRG.25695 Avicennia marina HOM05D001459 ORTHO05D001359 4.5e-10 67.4 55 63.6
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 4.5e-10 67.4 61 60.7
Lj2A229T41 Lonicera japonica HOM05D001459 ORTHO05D001359 5.9e-10 67.0 61 59.0
Manes.15G191900 Manihot esculenta HOM05D001459 ORTHO05D001359 5.9e-10 67.0 61 52.5
Manes.15G192000 Manihot esculenta HOM05D001459 ORTHO05D001359 5.9e-10 67.0 61 54.1
AUR62007361 Chenopodium quinoa HOM05D001459 ORTHO05D001359 1.0e-09 66.2 55 60.0
FvH4_5g23200 Fragaria vesca HOM05D001459 ORTHO05D001359 1.0e-09 66.2 59 57.6
FAN04G0112 Fragaria x ananassa HOM05D001459 ORTHO05D001359 1.0e-09 66.2 59 57.6
FAN08G0121 Fragaria x ananassa HOM05D001459 ORTHO05D001359 1.0e-09 66.2 59 57.6
FAN13G2632 Fragaria x ananassa HOM05D001459 ORTHO05D001359 1.0e-09 66.2 59 57.6
FAN18G3381 Fragaria x ananassa HOM05D001459 ORTHO05D001359 1.0e-09 66.2 59 57.6
FAN18G3520 Fragaria x ananassa HOM05D001459 ORTHO05D001359 1.0e-09 66.2 59 57.6
Solyc08g005290.3 Solanum lycopersicum HOM05D001459 ORTHO05D001359 1.0e-09 66.2 55 58.2
Sopen08g001310 Solanum pennellii HOM05D001459 ORTHO05D001359 1.0e-09 66.2 55 58.2
PGSC0003DMG400018469 Solanum tuberosum HOM05D001459 ORTHO05D001359 1.0e-09 66.2 55 58.2
Oeu027098.1 Olea europaea HOM05D001459 ORTHO05D001359 1.7e-09 65.5 55 63.6
Peaxi162Scf00052g00335 Petunia axillaris HOM05D001459 ORTHO05D001359 2.2e-09 65.1 55 52.7
Glyma.16G095200 Glycine max HOM05D001459 ORTHO05D001359 2.9e-09 64.7 61 55.7
Phvul.003G273900 Phaseolus vulgaris HOM05D001459 ORTHO05D001359 2.9e-09 64.7 61 55.7
ATR0829G146 Amborella trichopoda HOM05D001459 ORTHO05D001359 3.8e-09 64.3 63 58.7
COL.COLO4_16931 Corchorus olitorius HOM05D001459 ORTHO05D001359 3.8e-09 64.3 61 55.7
Hund14381 Selenicereus undatus HOM05D001459 ORTHO05D001359 3.8e-09 64.3 61 49.2
VMungo0251G1353 Vigna mungo HOM05D001459 ORTHO05D001359 5.0e-09 63.9 61 54.1
Lj2g0012038 Lotus japonicus HOM05D001459 ORTHO05D001359 6.5e-09 63.5 59 59.3
Aqoxy3G02160 Aquilegia oxysepala HOM05D001459 ORTHO05D001359 1.4e-08 62.4 62 54.8
Migut.E01317 Erythranthe guttata HOM05D001459 ORTHO05D001359 1.4e-08 62.4 55 60.0
Nn3g19377 Nelumbo nucifera HOM05D001459 ORTHO05D001359 1.4e-08 62.4 56 57.1
Nitab4.5_0000556g0270 Nicotiana tabacum HOM05D001459 ORTHO05D001359 1.4e-08 62.4 56 57.1
RcHm_v2.0_Chr7g0212131 Rosa chinensis HOM05D001459 ORTHO05D001359 1.4e-08 62.4 59 55.9
Cfa012529 Carpinus fangiana HOM05D001459 ORTHO05D001359 1.9e-08 62.0 62 58.1
Gohir.A03G000030 Gossypium hirsutum HOM05D001459 ORTHO05D001359 1.9e-08 62.0 57 57.9
TWI15G0913 Tripterygium wilfordii HOM05D001459 ORTHO05D001359 2.5e-08 61.6 43 62.8
MELO3C013820.2 Cucumis melo HOM05D001459 ORTHO05D001359 3.2e-08 61.2 61 54.1
CsaV3_3G001310 Cucumis sativus L. HOM05D001459 ORTHO05D001359 3.2e-08 61.2 61 54.1
Haze_08134 Corylus avellana HOM05D001459 ORTHO05D001359 5.5e-08 60.5 62 56.5
Lj8A322G33 Lonicera japonica HOM05D001459 ORTHO05D001359 5.5e-08 60.5 61 57.4
Medtr8g070820 Medicago truncatula HOM05D001459 ORTHO05D001359 5.5e-08 60.5 61 55.7
Nitab4.5_0004528g0040 Nicotiana tabacum HOM05D001459 ORTHO05D001359 5.5e-08 60.5 60 53.3
Potri.003G097600 Populus trichocarpa HOM05D001459 ORTHO05D001359 7.2e-08 60.1 61 54.1
EL10Ac5g12000 Beta vulgaris HOM05D001459 ORTHO05D001359 9.4e-08 59.7 57 54.4
CSS0040681 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 9.4e-08 59.7 51 60.8
Sabra03G0066100 Salix brachista HOM05D001515 ORTHO05D001359 9.4e-08 59.7 61 52.5
Hund11171 Selenicereus undatus HOM05D001459 ORTHO05D001359 9.4e-08 59.7 61 45.9
SGA_v2.0_scaffold96G29039 Striga asiatica HOM05D001459 ORTHO05D001359 9.4e-08 59.7 55 58.2
AUR62018627 Chenopodium quinoa HOM05D001459 ORTHO05D001359 1.2e-07 59.3 55 54.5
Duzib205G1077 Durio zibethinus HOM05D001459 ORTHO05D001359 1.2e-07 59.3 57 56.1
PSO782G4644 Papaver somniferum HOM05D001459 ORTHO05D001359 1.2e-07 59.3 60 53.3
Gorai.003G185700 Gossypium raimondii HOM05D001459 ORTHO05D001359 1.6e-07 58.9 61 54.1
Peaxi162Scf00045g00325 Petunia axillaris HOM05D001459 ORTHO05D001359 1.6e-07 58.9 55 56.4
PSO063G5354 Papaver somniferum HOM05D001459 ORTHO05D001359 2.1e-07 58.5 60 53.3
Sabra01G0105200 Salix brachista HOM05D001459 ORTHO05D001359 2.1e-07 58.5 61 49.2
Gohir.D03G176500 Gossypium hirsutum HOM05D001459 ORTHO05D001359 4.6e-07 57.4 61 52.5
Nn1g01860 Nelumbo nucifera HOM05D001459 ORTHO05D001359 6.1e-07 57.0 57 56.1
Nitab4.5_0000301g0070 Nicotiana tabacum HOM05D001459 ORTHO05D001359 7.9e-07 56.6 55 50.9
Sed0005581 Sechium edule HOM05D001459 ORTHO05D001359 1.0e-06 56.2 61 50.8
unitig_699.g19757 Utricularia gibba HOM05D001459 ORTHO05D001359 1.0e-06 56.2 55 50.9
Ah.12g055550 Amaranthus hybridus HOM05D001459 ORTHO05D001359 1.4e-06 55.8 49 57.1
Sc01g0006020 Simmondsia chinensis HOM05D001459 ORTHO05D001359 1.4e-06 55.8 60 53.3
TAR366G0001 Trochodendron aralioides HOM05D001459 ORTHO05D001359 1.4e-06 55.8 61 52.5
ClCG10G001250 Citrullus lanatus HOM05D001459 ORTHO05D001359 1.8e-06 55.5 59 50.8
Rhsim11G0032400 Rhododendron simsii HOM05D001459 ORTHO05D001359 1.8e-06 55.5 55 58.2
RhsimUnG0059100 Rhododendron simsii HOM05D001459 ORTHO05D001359 1.8e-06 55.5 55 58.2
CAN.G137.28 Capsicum annuum HOM05D001459 ORTHO05D001359 2.3e-06 55.1 55 54.5
unitig_52.g17230 Utricularia gibba HOM05D001459 ORTHO05D001359 3.0e-06 54.7 55 50.9
Oeu016701.2 Olea europaea HOM05D001459 ORTHO05D001359 3.9e-06 54.3 55 50.9
DCAR_004268 Daucus carota HOM05D001459 ORTHO05D001359 6.7e-06 53.5 61 54.1
DCAR_008218 Daucus carota HOM05D001459 ORTHO05D001359 6.7e-06 53.5 56 55.4


User provided reference genes

Program Settings