Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 2.4e-81 305.4 154 100.0
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 5.4e-49 198.0 112 88.4
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 5.6e-46 188.0 114 82.5
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 6.2e-45 184.5 104 85.6
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 8.1e-45 184.1 104 84.6
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 1.1e-44 183.7 110 81.8
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 1.4e-44 183.3 106 83.0
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 1.4e-44 183.3 110 81.8
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 5.2e-44 181.4 112 79.5
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 1.2e-43 180.3 111 79.3
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 1.5e-43 179.9 108 79.6
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 2.0e-43 179.5 101 87.1
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 2.0e-43 179.5 116 76.7
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 3.4e-43 178.7 131 70.2
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 5.8e-43 177.9 109 78.0
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 5.8e-43 177.9 106 81.1
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 5.8e-43 177.9 115 78.3
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 2.2e-42 176.0 100 84.0
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 2.2e-42 176.0 112 79.5
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 2.2e-42 176.0 106 78.3
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 2.9e-42 175.6 100 86.0
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 3.7e-42 175.3 106 80.2
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 4.9e-42 174.9 109 78.9
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 4.9e-42 174.9 113 77.9
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 4.9e-42 174.9 130 69.2
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 6.4e-42 174.5 103 80.6
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 1.1e-41 173.7 124 75.0
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 1.4e-41 173.3 112 77.7
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 1.9e-41 172.9 111 79.3
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 2.4e-41 172.6 113 77.0
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 3.2e-41 172.2 109 79.8
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 5.4e-41 171.4 103 81.6
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 7.1e-41 171.0 101 82.2
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 9.2e-41 170.6 99 83.8
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 9.2e-41 170.6 99 83.8
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 9.2e-41 170.6 115 73.9
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 9.2e-41 170.6 109 78.9
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 1.2e-40 170.2 106 75.5
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 1.2e-40 170.2 116 75.9
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 1.2e-40 170.2 108 77.8
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 1.6e-40 169.9 112 79.5
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 2.1e-40 169.5 104 80.8
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.1e-40 169.5 104 80.8
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.1e-40 169.5 104 80.8
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 2.7e-40 169.1 98 83.7
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 2.7e-40 169.1 98 83.7
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 2.7e-40 169.1 114 74.6
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.7e-40 169.1 104 80.8
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.7e-40 169.1 103 81.6
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.7e-40 169.1 116 75.9
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 2.7e-40 169.1 109 79.8
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 2.7e-40 169.1 127 69.3
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 6.0e-40 167.9 104 80.8
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 6.0e-40 167.9 109 78.9
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 7.8e-40 167.5 99 80.8
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 1.0e-39 167.2 109 78.0
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 1.7e-39 166.4 99 82.8
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 1.7e-39 166.4 105 80.0
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 3.9e-39 165.2 99 81.8
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 5.1e-39 164.9 102 78.4
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 8.6e-39 164.1 104 77.9
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 1.5e-38 163.3 100 81.0
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.9e-38 162.9 94 81.9
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 1.9e-38 162.9 94 81.9
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 1.9e-38 162.9 100 79.0
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 3.3e-38 162.2 94 80.9
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 7.3e-38 161.0 99 78.8
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 1.2e-37 160.2 95 83.2
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 1.2e-37 160.2 99 77.8
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 2.8e-37 159.1 97 81.4
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 3.6e-37 158.7 104 76.9
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 3.6e-37 158.7 99 78.8
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 6.2e-37 157.9 124 66.9
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 6.2e-37 157.9 99 76.8
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 1.8e-36 156.4 114 71.9
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 1.8e-36 156.4 92 85.9
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 5.2e-36 154.8 98 77.6
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 6.8e-36 154.5 110 70.9
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 8.9e-36 154.1 107 72.0
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 1.2e-35 153.7 112 70.5
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 1.2e-35 153.7 95 78.9
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 1.5e-35 153.3 95 78.9
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 2.6e-35 152.5 93 80.6
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 4.4e-35 151.8 96 77.1
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 4.4e-35 151.8 92 77.2
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 7.6e-35 151.0 99 73.7
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 1.3e-34 150.2 95 76.8
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 1.7e-34 149.8 89 83.1
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 3.7e-34 148.7 91 80.2
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 3.7e-34 148.7 95 74.7
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 4.9e-34 148.3 99 71.7
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 1.5e-30 136.7 100 70.0
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 1.4e-28 130.2 93 69.9
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 2.0e-27 126.3 98 64.3
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 1.3e-26 123.6 94 64.9
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 1.2e-24 117.1 84 67.9
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 5.1e-23 111.7 97 59.8
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 1.4e-17 93.6 104 51.9
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.6e-13 79.0 49 79.6


User provided reference genes

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