Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0178F.1_g078440 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 1.3e-79 299.7 158 100.0
Hma1.2p1_0178F.1_g078450 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 1.8e-52 209.5 115 93.0
Dinv00450 Davidia involucrata HOM05D006851 ORTHO05D008844 5.2e-47 191.4 149 68.5
Dinv06196 Davidia involucrata HOM05D006851 ORTHO05D008844 2.0e-46 189.5 149 67.8
GSVIVG01020766001 Vitis vinifera HOM05D006851 ORTHO05D008844 1.4e-39 166.8 145 62.1
CiPaw.04G128500 Carya illinoinensis HOM05D006851 ORTHO05D008844 2.0e-38 162.9 144 60.4
Actinidia24403 Actinidia chinensis HOM05D006851 ORTHO05D008844 4.9e-37 158.3 145 61.4
Oeu020925.1 Olea europaea HOM05D006851 ORTHO05D008844 4.9e-37 158.3 153 57.5
Atru.chr6.2752 Acer truncatum HOM05D006851 ORTHO05D008844 1.1e-36 157.1 143 58.0
RcHm_v2.0_Chr2g0131101 Rosa chinensis HOM05D006851 ORTHO05D008844 1.1e-36 157.1 146 61.0
Ciclev10016542m.g Citrus clementina HOM05D006851 ORTHO05D008844 1.4e-36 156.8 155 56.8
Lsat_1_v5_gn_4_64780 Lactuca sativa HOM05D006851 ORTHO05D008844 1.4e-36 156.8 150 58.0
FAN14G0067 Fragaria x ananassa HOM05D006851 ORTHO05D008844 1.8e-36 156.4 146 60.3
Cfa014654 Carpinus fangiana HOM05D006851 ORTHO05D008844 4.1e-36 155.2 151 59.6
COL.COLO4_33621 Corchorus olitorius HOM05D006851 ORTHO05D008844 9.2e-36 154.1 143 59.4
FvH4_6g27820 Fragaria vesca HOM05D006851 ORTHO05D008844 9.2e-36 154.1 146 59.6
CARHR137850 Cardamine hirsuta HOM05D006851 ORTHO05D008844 2.0e-35 152.9 151 55.0
Haze_13231 Corylus avellana HOM05D006851 ORTHO05D008844 2.0e-35 152.9 151 58.3
AL4G41380 Arabidopsis lyrata HOM05D006851 ORTHO05D008844 2.7e-35 152.5 151 54.3
Cpa.g.sc483.1 Carica papaya HOM05D006851 ORTHO05D008844 4.5e-35 151.8 149 55.0
Thhalv10017191m.g Eutrema salsugineum HOM05D006851 ORTHO05D008844 4.5e-35 151.8 151 55.0
Prupe.3G112500 Prunus persica HOM05D006851 ORTHO05D008844 1.7e-34 149.8 144 57.6
Aa31LG1G24530 Aethionema arabicum HOM05D006851 ORTHO05D008844 2.3e-34 149.4 149 51.7
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 2.3e-34 149.4 144 55.6
MSTRG.6776 Avicennia marina HOM05D006851 ORTHO05D008844 2.9e-34 149.1 147 54.4
Lalb_Chr03g0029611 Lupinus albus HOM05D006851 ORTHO05D008844 5.0e-34 148.3 145 54.5
PGSC0003DMG400017313 Solanum tuberosum HOM05D006851 ORTHO05D008844 5.0e-34 148.3 144 56.9
Duzib187G0166 Durio zibethinus HOM05D006851 ORTHO05D008844 1.1e-33 147.1 151 57.0
Migut.M00236 Erythranthe guttata HOM05D006851 ORTHO05D008844 1.5e-33 146.7 148 54.1
BraA04t18692Z Brassica rapa HOM05D006851 ORTHO05D008844 1.9e-33 146.4 142 52.1
FAN09G4077 Fragaria x ananassa HOM05D006851 ORTHO05D008844 1.9e-33 146.4 164 53.0
Gorai.008G099400 Gossypium raimondii HOM05D006851 ORTHO05D008844 1.9e-33 146.4 151 53.6
C04p69910 Brassica napus HOM05D006851 ORTHO05D008844 2.5e-33 146.0 142 52.1
BolC4t28490H Brassica oleracea HOM05D006851 ORTHO05D008844 2.5e-33 146.0 142 52.1
Gohir.A12G091300 Gossypium hirsutum HOM05D006851 ORTHO05D008844 2.5e-33 146.0 151 53.6
HanXRQChr14g0455141 Helianthus annuus HOM05D006851 ORTHO05D008844 2.5e-33 146.0 144 55.6
PGR142G1684 Punica granatum HOM05D006851 ORTHO05D008844 2.5e-33 146.0 152 52.6
A04p32390 Brassica napus HOM05D006851 ORTHO05D008844 3.3e-33 145.6 142 52.1
Peaxi162Scf00469g00629 Petunia axillaris HOM05D006851 ORTHO05D008844 3.3e-33 145.6 146 54.8
Sopen07g026880 Solanum pennellii HOM05D006851 ORTHO05D008844 5.6e-33 144.8 146 56.8
Solyc07g055340.3 Solanum lycopersicum HOM05D006851 ORTHO05D008844 7.3e-33 144.4 146 56.2
BcaC02g07219 Brassica carinata HOM05D000115 ORTHO05D005317 1.6e-32 143.3 142 52.1
AT2G42770 Arabidopsis thaliana HOM05D006851 ORTHO05D008844 2.1e-32 142.9 151 52.3
Gohir.D12G091800 Gossypium hirsutum HOM05D006851 ORTHO05D008844 2.8e-32 142.5 151 53.0
Nitab4.5_0000249g0050 Nicotiana tabacum HOM05D006851 ORTHO05D008844 3.6e-32 142.1 152 53.9
CsaV3_6G037870 Cucumis sativus L. HOM05D006851 ORTHO05D008844 4.7e-32 141.7 149 53.0
QL08p039990 Quercus lobata HOM05D006851 ORTHO05D008844 8.0e-32 141.0 144 55.6
MD17G1263400 Malus domestica HOM05D006851 ORTHO05D008844 1.8e-31 139.8 147 54.4
Manes.02G088700 Manihot esculenta HOM05D006851 ORTHO05D008844 1.8e-31 139.8 145 53.1
MELO3C014448.2 Cucumis melo HOM05D006851 ORTHO05D008844 6.8e-31 137.9 151 52.3
arahy.Tifrunner.gnm1.ann1.WV2S1U Arachis hypogaea HOM05D006851 ORTHO05D008844 8.9e-31 137.5 154 50.0
Carub.0004s2521 Capsella rubella HOM05D006851 ORTHO05D008844 1.2e-30 137.1 151 51.0
CANSAT64G1521 Cannabis sativa HOM05D006851 ORTHO05D008844 2.0e-30 136.3 147 52.4
CAN.G1360.8 Capsicum annuum HOM05D006851 ORTHO05D008844 2.0e-30 136.3 148 49.3
Medtr4g078760 Medicago truncatula HOM05D006851 ORTHO05D008844 3.4e-30 135.6 149 52.3
VMungo1127G1292 Vigna mungo HOM05D006851 ORTHO05D008844 3.4e-30 135.6 149 52.3
TWI59G1351 Tripterygium wilfordii HOM05D006851 ORTHO05D008844 4.4e-30 135.2 144 58.3
Nitab4.5_0005922g0060 Nicotiana tabacum HOM05D006851 ORTHO05D008844 5.7e-30 134.8 152 50.7
TAR627G1017 Trochodendron aralioides HOM05D006851 ORTHO05D008844 7.5e-30 134.4 153 51.6
Phvul.011G124700 Phaseolus vulgaris HOM05D006851 ORTHO05D008844 9.8e-30 134.0 149 52.3
Psat7g167960 Pisum sativum HOM05D006851 ORTHO05D008844 1.3e-29 133.7 149 49.7
THA.LOC104803044 Tarenaya hassleriana HOM05D006851 ORTHO05D008844 1.7e-29 133.3 152 51.3
ClCG09G020830 Citrullus lanatus HOM05D006851 ORTHO05D008844 2.2e-29 132.9 143 50.3
SalBow7G2485 Salvia bowleyana HOM05D006851 ORTHO05D008844 2.2e-29 132.9 141 52.5
TPR.G9347 Trifolium pratense HOM05D006851 ORTHO05D008844 2.2e-29 132.9 149 50.3
Sabra10G0010500 Salix brachista HOM05D006851 ORTHO05D008844 2.9e-29 132.5 146 54.8
Sed0012320 Sechium edule HOM05D006851 ORTHO05D008844 4.9e-29 131.7 143 47.6
Sp4g24890 Schrenkiella parvula HOM05D006851 ORTHO05D008844 6.4e-29 131.3 115 58.3
MD09G1234300 Malus domestica HOM05D006851 ORTHO05D008844 8.3e-29 131.0 157 51.0
Ca_18924_v3 Cicer arietinum L. HOM05D006851 ORTHO05D008844 1.1e-28 130.6 149 49.7
Glyma.06G289700 Glycine max HOM05D006851 ORTHO05D008844 1.1e-28 130.6 101 64.4
Nn3g21095 Nelumbo nucifera HOM05D006851 ORTHO05D008844 1.1e-28 130.6 139 51.8
Aqoxy4G00244 Aquilegia oxysepala HOM05D006851 ORTHO05D008844 2.4e-28 129.4 147 51.7
AUR62024041 Chenopodium quinoa HOM05D006851 ORTHO05D008844 7.0e-28 127.9 152 48.7
Cc05_g08670 Coffea canephora HOM05D006851 ORTHO05D008844 1.6e-27 126.7 154 50.6
Potri.010G032900 Populus trichocarpa HOM05D006851 ORTHO05D008844 2.0e-27 126.3 104 59.6
EL10Ac9g20993 Beta vulgaris HOM05D006851 ORTHO05D008844 2.7e-27 125.9 155 49.0
CSS0045809 Camellia sinensis var. sinensis HOM05D006851 ORTHO05D008844 2.7e-27 125.9 101 62.4
SGA_v2.0_scaffold9G04858 Striga asiatica HOM05D006851 ORTHO05D008844 1.7e-26 123.2 183 42.1
Lj3g0025564 Lotus japonicus HOM05D006851 ORTHO05D008844 3.0e-26 122.5 101 60.4
PSO170G1219 Papaver somniferum HOM05D006851 ORTHO05D008844 6.6e-26 121.3 150 48.7
Sc21g0003000 Simmondsia chinensis HOM05D006851 ORTHO05D008844 1.1e-25 120.6 150 48.7
ECA233G5608 Erigeron canadensis HOM05D006851 ORTHO05D008844 1.5e-25 120.2 145 53.1
PSO782G5210 Papaver somniferum HOM05D006851 ORTHO05D008844 3.6e-24 115.5 150 48.7
Lj1A675G56 Lonicera japonica HOM05D006851 ORTHO05D008844 4.7e-24 115.2 216 39.8
ATR0012G031 Amborella trichopoda HOM05D006851 ORTHO05D008844 3.1e-23 112.5 149 46.3
Zm00001eb361970 Zea mays HOM05D006851 ORTHO05D008844 5.2e-23 111.7 105 57.1
unitig_62.g23129 Utricularia gibba HOM05D006851 ORTHO05D008844 8.9e-23 110.9 151 51.0
Os01g0730800 Oryza sativa ssp. japonica HOM05D006851 ORTHO05D008844 5.8e-22 108.2 111 55.9
SEGI_02260 Sequoiadendron giganteum HOM05D006851 ORTHO05D008844 7.5e-22 107.8 148 45.3
SMO351G0432 Selaginella moellendorffii HOM05D006851 ORTHO05D008844 2.9e-21 105.9 128 49.2
SEGI_39598 Sequoiadendron giganteum HOM05D006851 ORTHO05D008844 4.6e-19 98.6 145 42.1
HPP92_011489 Vanilla planifolia HOM05D006851 ORTHO05D008844 5.0e-18 95.1 155 44.5
Mapoly0112s0035 Marchantia polymorpha HOM05D006851 ORTHO05D008844 1.1e-17 94.0 144 40.3
Pp3c20_12770 Physcomitrium patens HOM05D006851 ORTHO05D008844 2.5e-17 92.8 121 43.0
Ca_29529_v3 Cicer arietinum L. HOM05D006851 ORTHO05D008844 1.2e-16 90.5 53 73.6
AagrBONN_evm.TU.Sc2ySwM_228.5720 Anthoceros agrestis HOM05D006851 ORTHO05D008844 2.1e-16 89.7 144 39.6
COL.COLO4_34178 Corchorus olitorius HOM05D006851 ORTHO05D008844 3.1e-15 85.9 116 41.4
CBR_g30010 Chara braunii HOM05D006851 ORTHO05D008844 5.2e-15 85.1 98 44.9
Thecc.01G154300 Theobroma cacao HOM05D006851 ORTHO05D008844 2.0e-14 83.2 57 59.6
Eucgr.K01171 Eucalyptus grandis HOM05D006851 ORTHO05D008844 2.6e-14 82.8 54 63.0
Thecc.08G139600 Theobroma cacao HOM05D006851 ORTHO05D008844 5.8e-14 81.6 46 71.7
Thecc.01G154800 Theobroma cacao HOM05D006851 ORTHO05D008844 2.2e-13 79.7 107 48.6
Atru.chr1.3299 Acer truncatum HOM05D006851 ORTHO05D008844 3.5e-11 72.4 90 50.0
Glyma.12G117300 Glycine max HOM05D006851 ORTHO05D008844 1.5e-09 67.0 36 77.8
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 1.5e-09 67.0 145 35.2
FAN02G4364 Fragaria x ananassa HOM05D006851 ORTHO05D008844 2.8e-08 62.8 36 75.0
Thecc.01G154700 Theobroma cacao HOM05D006851 ORTHO05D008844 8.1e-08 61.2 36 69.4
BcaB06g29263 Brassica carinata HOM05D006851 ORTHO05D008844 2.3e-07 59.7 52 59.6
ClCG09G020820 Citrullus lanatus HOM05D006851 ORTHO05D008844 3.1e-07 59.3 85 44.7
Eucgr.K01172 Eucalyptus grandis HOM05D006851 ORTHO05D008844 3.1e-07 59.3 78 48.7
Cre16.g683750 Chlamydomonas reinhardtii HOM05D006851 ORTHO05D008844 2.0e-06 56.6 145 31.7


User provided reference genes

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