Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.3e-108 396.7 249 100.0
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 3.8e-68 262.3 195 69.7
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 9.3e-67 257.7 134 86.6
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.3e-64 248.8 133 85.7
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.3e-64 248.8 133 85.7
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 7.3e-64 248.1 133 85.0
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.6e-63 246.9 133 84.2
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.6e-63 246.9 133 84.2
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.1e-63 246.5 134 82.8
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 3.6e-63 245.7 134 82.1
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 4.8e-63 245.4 133 83.5
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 8.1e-63 244.6 133 82.0
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 8.1e-63 244.6 134 80.6
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.1e-62 244.2 134 81.3
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.1e-62 244.2 133 81.2
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.1e-62 244.2 133 80.5
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 1.8e-62 243.4 133 83.5
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.8e-62 243.4 134 82.1
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 2.4e-62 243.0 133 84.2
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 4.0e-62 242.3 134 82.1
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 5.3e-62 241.9 134 79.1
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 5.3e-62 241.9 181 64.6
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 5.3e-62 241.9 134 80.6
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 6.9e-62 241.5 133 82.7
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 9.0e-62 241.1 134 81.3
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 9.0e-62 241.1 133 80.5
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 9.0e-62 241.1 133 80.5
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 9.0e-62 241.1 133 82.0
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.2e-61 240.7 133 81.2
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.5e-61 240.4 139 80.6
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 1.5e-61 240.4 133 81.2
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 3.4e-61 239.2 133 79.7
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 4.5e-61 238.8 134 79.1
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 4.5e-61 238.8 133 79.7
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 5.8e-61 238.4 134 79.1
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.3e-60 237.3 134 78.4
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 2.2e-60 236.5 133 80.5
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 3.8e-60 235.7 133 78.9
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 4.9e-60 235.3 134 79.1
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 4.9e-60 235.3 134 79.9
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 4.9e-60 235.3 134 76.9
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 6.4e-60 235.0 133 78.9
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 6.4e-60 235.0 135 77.8
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 6.4e-60 235.0 134 79.9
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 8.4e-60 234.6 133 78.2
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.1e-59 234.2 133 76.7
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.1e-59 234.2 134 78.4
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 1.1e-59 234.2 133 79.7
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.4e-59 233.8 133 78.2
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 1.9e-59 233.4 134 76.9
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 1.9e-59 233.4 134 76.9
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.9e-59 233.4 134 78.4
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 1.9e-59 233.4 134 79.1
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 2.4e-59 233.0 133 78.2
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.4e-59 233.0 133 78.2
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 2.4e-59 233.0 133 78.2
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.2e-59 232.6 134 76.9
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.2e-59 232.6 134 76.9
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 4.2e-59 232.3 133 78.2
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 5.4e-59 231.9 134 76.9
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 5.4e-59 231.9 133 76.7
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 7.1e-59 231.5 132 77.3
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 9.3e-59 231.1 133 77.4
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 2.1e-58 229.9 133 74.4
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 2.7e-58 229.6 133 74.4
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 4.6e-58 228.8 134 78.4
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 7.9e-58 228.0 134 76.1
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.0e-57 227.6 133 75.9
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.3e-57 227.3 133 76.7
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 1.8e-57 226.9 133 72.9
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 1.8e-57 226.9 134 74.6
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 2.3e-57 226.5 133 73.7
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 3.9e-57 225.7 133 73.7
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 3.9e-57 225.7 133 73.7
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 8.7e-57 224.6 134 73.9
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.5e-56 223.8 133 72.9
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 3.3e-56 222.6 133 72.2
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.3e-56 222.6 133 77.4
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 4.3e-56 222.2 133 71.4
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 4.3e-56 222.2 133 72.2
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 5.6e-56 221.9 134 73.9
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 5.6e-56 221.9 157 65.6
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.3e-55 220.7 134 71.6
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 3.7e-55 219.2 134 73.9
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 1.1e-54 217.6 133 75.9
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 3.1e-54 216.1 169 60.9
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 5.3e-54 215.3 133 72.2
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 1.3e-52 210.7 159 62.9
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.9e-52 209.5 133 69.9
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 1.3e-49 200.7 109 79.8
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 6.7e-49 198.4 134 70.9
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 1.5e-45 187.2 130 63.8
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 4.5e-45 185.7 133 63.2
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 2.9e-44 183.0 134 60.4
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 8.4e-44 181.4 106 73.6
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.5e-43 179.9 132 61.4
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 6.0e-42 175.3 129 63.6
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 3.2e-35 152.9 130 51.5
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.3e-33 146.7 81 81.5
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.0e-33 146.4 126 57.9
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 7.7e-29 131.7 75 76.0
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.7e-28 130.6 90 67.8
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.0e-25 121.3 136 39.7
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 5.1e-25 119.0 117 51.3
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 1.3e-20 104.4 58 81.0
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 3.2e-19 99.8 60 75.0
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 2.1e-18 97.1 55 76.4
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 4.7e-18 95.9 55 72.7
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 8.0e-18 95.1 53 83.0
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.6e-13 80.1 97 44.3
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 2.6e-13 80.1 92 46.7
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 2.6e-13 80.1 92 46.7
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.6e-13 80.1 92 46.7
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 5.9e-13 79.0 91 46.2
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 2.2e-07 60.5 33 72.7


User provided reference genes

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