Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 7.0e-207 723.8 382 100.0
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 6.0e-166 587.8 380 76.8
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 1.7e-160 569.7 381 76.4
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 3.5e-158 562.0 398 73.6
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 7.3e-156 554.3 320 83.8
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 2.1e-155 552.7 331 81.0
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 6.2e-155 551.2 332 79.5
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.1e-154 550.4 322 85.1
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 1.2e-153 547.0 327 79.8
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 3.8e-152 542.0 328 79.9
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 3.2e-151 538.9 370 72.2
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 4.2e-151 538.5 320 82.2
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 5.4e-151 538.1 329 78.4
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 1.2e-150 537.0 324 79.6
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.6e-150 536.6 320 80.9
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 7.9e-150 534.3 320 80.6
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.3e-149 533.5 333 79.0
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 1.3e-149 533.5 320 80.9
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.3e-149 532.7 332 78.3
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.9e-149 531.9 323 78.9
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 5.1e-149 531.6 331 77.0
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 6.7e-149 531.2 326 78.8
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 8.7e-149 530.8 320 80.3
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.5e-148 529.3 332 78.3
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 7.4e-148 527.7 331 77.3
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 9.6e-148 527.3 329 78.1
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 3.7e-147 525.4 333 75.7
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.8e-146 523.1 327 77.1
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 3.1e-146 522.3 382 68.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 4.0e-146 521.9 332 76.8
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 9.0e-146 520.8 332 75.3
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.5e-145 520.0 382 67.8
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 3.4e-145 518.8 329 76.0
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 7.6e-145 517.7 332 75.0
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 3.8e-144 515.4 321 76.9
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 8.4e-144 514.2 320 76.6
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.1e-143 513.8 328 75.3
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.4e-143 513.5 327 75.8
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 7.1e-143 511.1 332 75.0
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 1.2e-142 510.4 330 74.8
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 1.0e-141 507.3 320 76.6
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.5e-140 503.4 320 76.2
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 9.6e-140 500.7 332 72.3
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 2.1e-139 499.6 332 71.1
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 6.2e-139 498.0 332 71.1
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 6.2e-139 498.0 332 71.7
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 2.4e-138 496.1 320 74.1
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 3.1e-138 495.7 383 66.6
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 5.3e-138 495.0 331 70.4
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 6.9e-138 494.6 332 72.0
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.2e-137 493.8 320 74.4
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 3.4e-137 492.3 320 74.1
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 3.4e-137 492.3 320 74.1
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 7.6e-137 491.1 328 72.0
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.7e-136 490.0 438 59.6
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 5.0e-136 488.4 320 72.8
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.1e-132 477.2 327 71.6
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 5.7e-132 474.9 277 84.1
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.7e-131 472.2 336 72.0
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.1e-127 460.7 328 72.3
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 7.4e-124 448.0 277 79.1
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 2.2e-123 446.4 273 78.4
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.8e-123 446.0 271 79.7
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.4e-122 443.7 341 66.0
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.0e-121 439.9 335 67.5
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 2.2e-120 436.4 267 78.3
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.6e-110 402.5 322 59.6
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.0e-109 401.0 277 68.6
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 8.8e-109 397.9 325 60.0
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 5.7e-108 395.2 290 68.3
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.4e-106 389.8 265 69.1
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 6.1e-102 375.2 331 62.5
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.7e-99 365.9 328 52.1
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 4.0e-93 345.9 277 64.6
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 2.0e-89 333.6 328 56.1
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 7.0e-82 308.5 195 75.4
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 6.2e-78 295.4 334 43.4
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.8e-77 293.9 191 75.4
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.5e-76 290.8 187 76.5
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 2.0e-76 290.4 315 47.6
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.9e-74 283.9 204 63.7
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.3e-72 277.7 319 47.6
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.1e-71 274.6 234 59.0
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.5e-71 274.2 183 72.7
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.2e-68 264.6 211 61.1
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.4e-66 257.7 407 36.6
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.0e-64 251.5 262 53.1
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 2.5e-63 246.9 249 52.6
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 3.6e-62 243.0 252 52.0
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.1e-58 229.6 220 52.7
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 7.8e-57 225.3 335 38.8
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.8e-53 214.2 303 37.0
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.7e-51 207.6 302 38.1
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.3e-48 198.0 306 37.3
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.7e-48 197.6 305 37.4
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 2.5e-47 193.7 141 66.7
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.1e-46 190.7 318 34.3
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 1.1e-45 188.3 120 76.7
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 3.1e-45 186.8 315 36.8
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.5e-44 184.5 110 79.1
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 7.9e-41 172.2 93 89.2
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 1.7e-40 171.0 319 32.0
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 5.6e-39 166.0 203 46.8
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.8e-36 156.0 311 33.1
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.9e-35 153.7 101 69.3
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 2.1e-33 147.5 138 55.1
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.3e-32 144.1 140 57.1
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 2.4e-29 134.0 125 56.0
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 4.2e-26 123.2 170 41.2
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 4.1e-21 106.7 87 60.9
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 5.5e-18 96.3 54 83.3
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 2.7e-17 94.0 54 81.5
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.9e-15 87.8 55 72.7
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 2.0e-12 77.8 61 59.0
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 2.2e-11 74.3 234 25.6
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.8e-11 73.6 242 27.7
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.1e-10 72.0 235 25.1
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.1e-10 72.0 272 23.9
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 3.2e-10 70.5 56 60.7
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 2.1e-09 67.8 86 40.7
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 3.0e-08 63.9 240 24.2
SMO358G0637 Selaginella moellendorffii HOM05D005748 ORTHO05D007123 4.8e-06 56.6 109 33.0


User provided reference genes

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