Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 0.0e+00 1455.3 800 100.0
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 7.8e-184 648.3 837 51.6
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 4.6e-176 622.5 828 52.9
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 1.1e-137 495.0 863 41.7
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 7.0e-124 449.1 777 45.9
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.6e-123 448.0 841 40.8
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 3.3e-97 360.5 832 36.8
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 2.0e-94 351.3 805 37.4
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 4.1e-92 343.6 823 35.2
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 4.7e-88 330.1 869 36.8
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 1.4e-87 328.6 820 34.5
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 3.4e-86 323.9 977 32.1
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 7.5e-86 322.8 864 34.7
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 5.1e-82 310.1 822 33.5
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 6.2e-80 303.1 852 34.3
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 8.1e-80 302.8 836 33.9
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 6.8e-79 299.7 787 37.6
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.5e-78 298.5 815 36.9
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 3.4e-78 297.4 843 34.5
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 6.4e-77 293.1 831 33.2
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 3.2e-76 290.8 796 34.2
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 3.0e-74 284.3 829 36.6
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 9.6e-73 279.3 815 33.1
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.8e-71 275.0 877 31.9
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 1.9e-68 265.0 830 31.7
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.9e-68 265.0 893 31.7
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 3.0e-66 257.7 799 32.3
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.9e-66 257.3 847 31.1
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 1.1e-65 255.8 827 32.0
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 2.5e-65 254.6 847 31.4
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 2.5e-65 254.6 833 31.1
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 4.3e-65 253.8 846 31.6
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 5.6e-65 253.4 861 31.2
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 7.3e-65 253.1 872 31.5
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 1.8e-63 248.4 897 29.8
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 5.3e-63 246.9 833 31.1
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 6.9e-63 246.5 826 30.4
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 9.0e-63 246.1 847 30.5
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 2.0e-62 245.0 905 29.3
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 7.6e-62 243.0 845 31.0
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 2.2e-61 241.5 846 31.2
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 2.4e-60 238.0 825 30.5
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 3.5e-59 234.2 991 28.9
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 4.6e-59 233.8 835 30.3
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.3e-58 232.3 847 30.1
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 1.1e-57 229.2 473 38.3
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 8.1e-56 223.0 867 29.5
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 2.4e-55 221.5 828 30.3
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 4.0e-47 194.1 806 27.4
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 9.0e-47 193.0 596 31.7
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.4e-46 191.0 875 27.9
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 2.9e-45 188.0 851 28.4
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 4.9e-45 187.2 767 27.6
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 5.5e-44 183.7 864 27.5
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 8.7e-42 176.4 807 27.8
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 3.3e-41 174.5 876 27.1
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 9.6e-41 172.9 891 29.7
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 2.1e-40 171.8 838 27.9
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.8e-40 171.4 512 33.8
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 1.1e-39 169.5 876 26.6
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.4e-39 169.1 234 48.3
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 2.6e-38 164.9 865 26.8
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 5.8e-38 163.7 842 27.2
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 1.7e-37 162.2 821 26.4
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 1.1e-36 159.5 917 26.3
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.2e-35 156.0 271 41.3
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 2.7e-35 154.8 836 26.4
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 7.4e-33 146.7 871 27.2
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 1.3e-32 146.0 844 27.1
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 2.8e-32 144.8 863 26.1
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.4e-31 142.5 877 25.7
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 4.1e-31 141.0 241 39.8
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 6.9e-31 140.2 296 34.8
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.2e-30 139.4 867 25.4
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 2.6e-30 138.3 556 27.0
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 4.2e-28 131.0 147 51.7
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 1.6e-27 129.0 800 26.6
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 1.0e-26 126.3 842 26.6
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 5.1e-26 124.0 820 26.0
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 6.7e-26 123.6 835 25.5
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 1.1e-25 122.9 103 61.2
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 1.5e-25 122.5 893 24.9
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.5e-25 122.5 104 60.6
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 5.7e-25 120.6 254 36.6
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 7.4e-25 120.2 821 25.8
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 2.2e-24 118.6 345 32.2
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 2.8e-24 118.2 813 24.7
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 2.4e-23 115.2 897 24.6
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 5.3e-23 114.0 883 25.1
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 9.1e-23 113.2 95 63.2
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 4.5e-22 110.9 835 24.4
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 4.5e-22 110.9 136 44.1
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 1.0e-21 109.8 257 33.5
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 2.9e-21 108.2 158 46.2
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 3.8e-21 107.8 152 46.1
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 1.4e-20 105.9 188 40.4
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 3.2e-20 104.8 465 31.8
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 4.2e-20 104.4 826 24.7
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 1.6e-19 102.4 201 38.3
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 9.7e-17 93.2 117 49.6
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 9.7e-17 93.2 875 24.6
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 1.3e-16 92.8 137 38.7
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 2.8e-16 91.7 257 33.9
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 9.1e-15 86.7 772 23.7
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.6e-14 85.9 802 23.4
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 1.8e-10 72.4 65 58.5
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 2.3e-10 72.0 169 33.7
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 7.5e-09 67.0 56 50.0
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 4.8e-08 64.3 56 50.0
QL05p044176 Quercus lobata HOM05D007489 ORTHO05D008037 2.7e-06 58.5 137 38.0


User provided reference genes

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