Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 1.8e-257 892.1 464 100.0
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 6.7e-119 431.8 464 53.4
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 2.6e-115 419.9 424 57.1
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 9.4e-105 384.8 421 53.9
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 6.1e-104 382.1 413 54.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 3.9e-103 379.4 466 49.1
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 1.1e-102 377.9 458 51.1
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 1.7e-93 347.4 468 45.5
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 3.5e-91 339.7 462 43.3
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 5.9e-91 339.0 460 45.4
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 7.7e-91 338.6 469 46.1
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 7.7e-91 338.6 458 43.9
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 1.1e-89 334.7 474 44.1
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 1.4e-87 327.8 465 44.3
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 1.5e-86 324.3 464 43.3
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 9.7e-86 321.6 461 45.1
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 6.3e-85 318.9 440 45.7
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.8e-84 317.4 456 44.3
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 3.1e-84 316.6 459 44.4
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 7.0e-84 315.5 458 45.2
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.0e-82 311.6 458 44.8
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 1.3e-82 311.2 372 48.4
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 5.0e-82 309.3 461 43.4
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 6.5e-82 308.9 466 44.2
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 8.5e-82 308.5 425 44.0
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 4.2e-81 306.2 418 44.5
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 7.2e-81 305.4 456 44.5
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 4.0e-79 299.7 432 43.5
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 2.0e-78 297.4 473 40.8
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 7.5e-78 295.4 445 44.0
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 9.8e-78 295.0 361 47.1
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 9.8e-78 295.0 476 42.4
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 2.8e-77 293.5 456 44.1
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.1e-76 291.6 461 42.1
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 1.4e-76 291.2 461 42.1
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.4e-76 291.2 422 45.3
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 1.8e-76 290.8 459 43.4
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 8.5e-74 282.0 412 42.7
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 4.7e-72 276.2 436 38.1
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 1.8e-71 274.2 452 43.8
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 1.2e-70 271.6 431 39.7
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 9.8e-70 268.5 429 41.5
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 1.3e-69 268.1 447 39.1
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 1.7e-69 267.7 456 39.3
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 1.7e-69 267.7 434 37.6
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 3.7e-69 266.5 326 47.2
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.1e-68 265.0 469 38.2
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 1.4e-68 264.6 425 40.2
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 9.2e-68 261.9 442 40.3
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 1.0e-66 258.5 474 36.5
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 5.0e-66 256.1 487 36.1
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 1.1e-65 255.0 423 39.5
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 1.5e-65 254.6 470 38.1
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 2.5e-65 253.8 423 39.5
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 3.3e-65 253.4 480 35.6
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 2.1e-64 250.8 435 37.2
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.6e-62 243.8 461 41.6
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 1.3e-61 241.5 456 39.5
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 6.4e-61 239.2 441 37.4
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 6.4e-61 239.2 434 39.9
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 3.2e-60 236.9 450 38.7
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 4.1e-60 236.5 420 39.0
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 5.4e-60 236.1 447 36.9
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 1.2e-59 235.0 423 37.1
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 5.9e-59 232.6 358 43.0
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 5.9e-59 232.6 427 39.8
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 2.5e-57 227.3 416 36.3
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 2.3e-55 220.7 450 34.4
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 3.1e-55 220.3 207 52.2
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 3.1e-55 220.3 377 38.5
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 3.4e-54 216.9 450 34.2
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 5.8e-54 216.1 453 34.4
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 9.8e-54 215.3 420 35.5
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.3e-53 214.9 420 35.5
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 3.7e-53 213.4 452 34.7
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 1.1e-52 211.8 423 34.8
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 7.0e-52 209.1 453 34.0
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 1.0e-50 205.3 400 37.0
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 1.1e-49 201.8 417 34.8
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 1.1e-49 201.8 276 42.8
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 1.5e-49 201.4 300 41.3
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.9e-49 201.1 377 37.1
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.9e-49 201.1 377 37.1
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 9.5e-49 198.7 242 45.0
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 6.2e-48 196.1 277 46.6
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 2.9e-45 187.2 369 35.0
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.1e-44 185.3 247 46.2
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 3.2e-44 183.7 418 33.0
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 3.5e-43 180.3 241 48.1
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 2.5e-41 174.1 427 33.5
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.9e-33 147.9 207 42.5
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 2.2e-29 134.4 311 36.7
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 2.4e-28 131.0 295 32.9
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 2.1e-27 127.9 178 47.2
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 1.0e-26 125.6 148 46.6
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 7.6e-22 109.4 327 26.3
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 2.9e-21 107.5 334 28.7
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 7.1e-20 102.8 443 24.6
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 6.0e-19 99.8 135 40.7
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 1.8e-18 98.2 211 37.4
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 2.1e-16 91.3 126 45.2
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 8.1e-16 89.4 109 45.0
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 6.9e-15 86.3 169 41.4
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.5e-14 85.1 180 37.8
MBI18_g46978_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.1e-12 79.0 99 47.5
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 7.1e-12 76.3 174 33.9
Cpa.g.sc51.64 Carica papaya HOM05D006063 ORTHO05D000023 3.5e-11 73.9 114 41.2
CBR_g8884 Chara braunii HOM05D006063 ORTHO05D000023 3.4e-06 57.4 247 22.7
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 7.6e-06 56.2 55 58.2


User provided reference genes

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