Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.2e-73 278.9 141 100.0
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.2e-73 278.9 141 100.0
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 9.9e-66 253.4 141 89.4
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 2.4e-59 232.3 141 81.6
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.0e-58 229.2 141 80.1
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.0e-58 229.2 141 80.1
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.5e-58 228.0 141 76.6
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 5.8e-58 227.6 141 78.0
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 5.8e-58 227.6 141 77.3
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.7e-57 226.1 141 76.6
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 4.9e-57 224.6 141 75.9
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 2.4e-56 222.2 141 78.7
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 5.4e-56 221.1 141 75.9
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 3.5e-55 218.4 141 73.0
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.0e-54 216.9 141 70.9
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.0e-54 216.9 163 68.1
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 3.0e-54 215.3 141 75.2
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 5.1e-54 214.5 141 71.6
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 5.1e-54 214.5 172 66.3
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 5.1e-54 214.5 141 73.8
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 8.7e-54 213.8 141 74.5
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 8.7e-54 213.8 141 73.0
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.1e-53 213.4 140 70.0
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 4.3e-53 211.5 144 74.3
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 4.3e-53 211.5 140 73.6
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 5.6e-53 211.1 141 74.5
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 7.4e-53 210.7 140 75.0
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 7.4e-53 210.7 140 75.0
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 9.6e-53 210.3 141 74.5
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 2.1e-52 209.1 140 74.3
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 2.1e-52 209.1 140 72.1
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 4.8e-52 208.0 140 71.4
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 6.2e-52 207.6 141 70.9
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.4e-51 206.5 140 69.3
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.4e-51 206.5 141 69.5
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.4e-51 205.7 157 65.6
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 3.1e-51 205.3 141 72.3
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 3.1e-51 205.3 141 72.3
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 3.1e-51 205.3 140 69.3
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 6.9e-51 204.1 141 69.5
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 6.9e-51 204.1 140 70.7
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 9.0e-51 203.8 141 69.5
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.2e-50 203.4 141 70.2
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.2e-50 203.4 140 69.3
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 2.6e-50 202.2 140 69.3
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 2.6e-50 202.2 141 70.2
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.6e-50 202.2 155 71.0
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 2.6e-50 202.2 141 72.3
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 3.4e-50 201.8 141 68.8
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 4.5e-50 201.4 141 67.4
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 4.5e-50 201.4 140 71.4
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 5.8e-50 201.1 141 68.1
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 7.6e-50 200.7 140 69.3
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 9.9e-50 200.3 141 68.8
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 9.9e-50 200.3 140 69.3
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.7e-49 199.5 140 67.1
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.7e-49 199.5 140 71.4
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.7e-49 199.5 141 67.4
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.4e-48 196.4 141 67.4
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.4e-48 196.4 141 66.0
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 1.4e-48 196.4 143 66.4
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.4e-48 195.7 141 65.2
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 4.2e-48 194.9 140 67.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 7.1e-48 194.1 143 65.7
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 9.3e-48 193.7 141 68.1
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 2.7e-47 192.2 143 65.7
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 3.5e-47 191.8 143 65.0
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 7.9e-47 190.7 141 63.1
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.0e-46 190.3 143 64.3
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.0e-46 190.3 143 63.6
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 1.8e-46 189.5 142 64.8
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.3e-46 189.1 141 64.5
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 2.3e-46 189.1 141 62.4
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 3.0e-46 188.7 143 64.3
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 6.7e-46 187.6 141 60.3
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 2.5e-45 185.7 143 62.9
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 5.6e-45 184.5 153 61.4
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 5.6e-45 184.5 142 63.4
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.6e-44 183.0 166 57.2
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.8e-43 179.5 162 57.4
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 2.4e-43 179.1 173 54.3
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 2.9e-41 172.2 147 58.5
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 7.1e-40 167.5 141 56.0
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.6e-39 166.4 144 63.2
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 2.7e-39 165.6 141 56.7
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 3.0e-38 162.2 141 56.0
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 3.3e-37 158.7 141 54.6
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 7.4e-37 157.5 100 79.0
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 7.4e-37 157.5 170 50.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 3.1e-35 152.1 232 41.4
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 8.2e-28 127.5 89 67.4
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 4.5e-26 121.7 208 42.3
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 6.5e-25 117.9 150 44.0
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 8.5e-25 117.5 78 73.1
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 6.7e-22 107.8 104 52.9
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 1.4e-19 100.1 64 76.6
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 9.1e-19 97.4 80 60.0
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.3e-17 93.6 54 85.2
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 5.0e-17 91.7 64 62.5
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 8.5e-17 90.9 125 43.2
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 6.7e-14 81.3 49 71.4
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 3.2e-08 62.4 55 47.3
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 3.2e-08 62.4 158 30.4


User provided reference genes

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