Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.8e-86 322.0 175 100.0
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 4.7e-49 198.4 175 65.7
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.5e-47 193.4 184 63.0
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 1.3e-46 190.3 175 60.6
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.4e-45 186.0 184 60.9
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 6.6e-43 177.9 163 63.2
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 2.0e-39 166.4 184 56.0
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 3.4e-39 165.6 177 57.6
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 3.7e-38 162.2 184 54.3
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 1.1e-37 160.6 175 54.9
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.1e-37 160.6 184 55.4
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 3.2e-37 159.1 184 53.8
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.2e-36 157.1 175 53.7
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.6e-36 156.8 175 51.4
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.6e-36 156.8 175 52.6
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.0e-35 154.1 184 53.8
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 2.3e-35 152.9 184 53.3
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 6.6e-35 151.4 172 55.8
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 6.6e-35 151.4 176 55.1
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.1e-34 150.6 175 52.6
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 1.5e-34 150.2 175 53.1
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 3.3e-34 149.1 177 49.2
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 3.3e-34 149.1 175 49.7
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 3.3e-34 149.1 173 49.1
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 4.3e-34 148.7 126 65.1
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 7.3e-34 147.9 175 51.4
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 9.5e-34 147.5 175 50.9
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 9.5e-34 147.5 174 55.2
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.2e-33 147.1 179 56.4
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.6e-33 146.7 175 50.9
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 2.1e-33 146.4 175 54.3
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 3.6e-33 145.6 171 52.6
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 4.7e-33 145.2 175 52.6
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 8.0e-33 144.4 180 52.2
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 8.0e-33 144.4 175 50.9
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 1.8e-32 143.3 175 49.7
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 1.8e-32 143.3 175 49.7
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.3e-32 142.9 197 50.8
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 3.1e-32 142.5 184 49.5
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 3.1e-32 142.5 184 50.0
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 4.0e-32 142.1 180 48.3
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 5.2e-32 141.7 184 50.0
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 6.8e-32 141.4 177 46.9
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 6.8e-32 141.4 177 48.0
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 1.2e-31 140.6 175 50.9
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.5e-31 140.2 175 47.4
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 9.8e-31 137.5 175 46.3
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 9.8e-31 137.5 175 46.3
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 2.9e-30 136.0 173 48.6
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.1e-29 134.0 183 44.3
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 4.1e-29 132.1 126 63.5
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 4.1e-29 132.1 184 45.1
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 7.0e-29 131.3 175 46.3
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 2.7e-28 129.4 177 49.2
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.5e-28 129.0 177 49.2
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 3.5e-28 129.0 177 49.2
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 4.6e-28 128.6 180 45.0
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.3e-27 127.1 126 56.3
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.7e-27 126.7 180 47.8
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 2.3e-27 126.3 175 48.0
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 3.9e-27 125.6 177 48.0
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 6.6e-27 124.8 165 46.1
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 1.1e-26 124.0 180 43.9
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 1.5e-26 123.6 143 54.5
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 1.9e-26 123.2 177 47.5
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 2.5e-26 122.9 180 45.0
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 4.3e-26 122.1 165 45.5
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 4.3e-26 122.1 123 53.7
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 7.3e-26 121.3 182 44.5
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 1.2e-25 120.6 180 44.4
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 1.2e-25 120.6 180 44.4
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 1.2e-25 120.6 180 44.4
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 1.6e-25 120.2 175 45.1
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 1.6e-25 120.2 175 41.7
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.1e-25 119.8 175 45.7
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 2.1e-25 119.8 176 45.5
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 2.1e-25 119.8 176 45.5
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 2.8e-25 119.4 180 47.2
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 5.2e-24 115.2 183 42.1
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 5.2e-24 115.2 175 44.0
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 6.8e-24 114.8 124 53.2
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 6.8e-24 114.8 175 41.1
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 8.9e-24 114.4 187 42.8
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 1.2e-23 114.0 123 55.3
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 3.4e-23 112.5 171 42.7
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.7e-22 110.2 183 41.0
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 2.2e-22 109.8 203 37.9
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 2.2e-22 109.8 187 42.2
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 4.1e-21 105.5 184 46.7
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 9.2e-21 104.4 219 38.4
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 9.2e-21 104.4 180 40.6
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 1.6e-20 103.6 184 41.8
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 4.6e-20 102.1 182 40.1
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 6.0e-20 101.7 183 39.3
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 1.7e-19 100.1 130 44.6
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 3.9e-19 99.0 116 49.1
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 1.1e-18 97.4 183 39.9
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 5.6e-18 95.1 184 40.2
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 2.8e-17 92.8 145 37.2
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 6.2e-17 91.7 128 43.0
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 8.9e-16 87.8 177 35.6
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 1.2e-15 87.4 117 46.2
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 5.8e-15 85.1 128 42.2
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.2e-14 83.2 161 38.5
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 9.2e-13 77.8 80 56.2
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 3.5e-12 75.9 174 29.3
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 5.1e-11 72.0 79 49.4
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 1.1e-10 70.9 78 52.6
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 8.1e-09 64.7 72 48.6
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 4.0e-08 62.4 51 68.6
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 1.2e-07 60.8 169 27.2
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 3.8e-06 55.8 73 49.3
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 3.8e-06 55.8 180 32.2
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 4.9e-06 55.5 122 33.6


User provided reference genes

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