Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.9e-56 222.2 109 100.0
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.9e-56 222.2 109 100.0
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.5e-48 195.3 95 100.0
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.8e-36 155.2 100 76.0
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-35 153.3 95 75.8
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.4e-35 152.9 95 74.7
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.4e-35 152.9 95 74.7
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.4e-35 152.9 91 82.4
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.4e-35 152.9 95 75.8
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.8e-35 152.5 95 75.8
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-35 152.5 95 75.8
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.8e-35 152.5 95 75.8
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.8e-35 152.5 95 75.8
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 5.3e-35 151.0 95 77.9
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.3e-35 151.0 91 81.3
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 7.0e-35 150.6 95 74.7
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 9.1e-35 150.2 88 78.4
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 9.1e-35 150.2 91 78.0
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 9.1e-35 150.2 95 73.7
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.2e-34 149.8 95 74.7
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.2e-34 149.8 95 75.8
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.2e-34 149.8 95 74.7
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 1.2e-34 149.8 95 76.8
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.2e-34 149.8 95 74.7
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.6e-34 149.4 96 75.0
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 1.6e-34 149.4 94 73.4
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.6e-34 149.4 94 75.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 2.0e-34 149.1 95 74.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 2.0e-34 149.1 95 73.7
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.0e-34 149.1 82 82.9
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 2.7e-34 148.7 87 77.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 2.7e-34 148.7 95 74.7
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 3.5e-34 148.3 95 74.7
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 4.5e-34 147.9 95 72.6
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 5.9e-34 147.5 84 79.8
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 5.9e-34 147.5 95 72.6
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 5.9e-34 147.5 91 76.9
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 5.9e-34 147.5 95 72.6
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 7.7e-34 147.1 95 73.7
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 7.7e-34 147.1 90 77.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.0e-33 146.7 92 73.9
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.0e-33 146.7 96 74.0
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.7e-33 146.0 84 78.6
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.7e-33 146.0 98 76.5
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.7e-33 146.0 94 71.3
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.2e-33 145.6 88 76.1
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 2.2e-33 145.6 95 74.7
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.2e-33 145.6 88 76.1
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 2.2e-33 145.6 88 76.1
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 2.9e-33 145.2 95 74.7
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 2.9e-33 145.2 95 71.6
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.9e-33 145.2 86 80.2
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 3.8e-33 144.8 94 77.7
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 3.8e-33 144.8 95 72.6
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 5.0e-33 144.4 82 78.0
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 5.0e-33 144.4 88 76.1
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.5e-33 144.1 95 71.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 6.5e-33 144.1 91 74.7
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 8.5e-33 143.7 90 76.7
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.1e-32 143.3 82 74.4
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.1e-32 143.3 90 72.2
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 1.1e-32 143.3 82 79.3
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.5e-32 142.9 98 72.4
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.5e-32 142.9 82 78.0
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.5e-32 142.9 93 72.0
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.5e-32 142.9 85 76.5
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.5e-32 142.9 91 76.9
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.9e-32 142.5 94 69.1
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.9e-32 142.5 86 73.3
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.9e-32 142.5 91 72.5
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.5e-32 142.1 98 70.4
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.2e-32 141.7 92 75.0
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 4.2e-32 141.4 92 70.7
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 5.5e-32 141.0 88 72.7
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 5.5e-32 141.0 95 67.4
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.2e-32 140.6 88 73.9
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 9.4e-32 140.2 81 76.5
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 9.4e-32 140.2 91 71.4
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.2e-31 139.8 92 73.9
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.2e-31 139.8 90 73.3
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.2e-31 139.8 92 70.7
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 1.2e-31 139.8 82 74.4
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.6e-31 139.4 93 69.9
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.6e-31 139.4 93 69.9
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.6e-31 139.4 90 74.4
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 1.6e-31 139.4 86 73.3
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 2.1e-31 139.0 93 67.7
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.1e-31 139.0 96 68.8
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.7e-31 138.7 92 69.6
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 3.6e-31 138.3 80 78.8
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 3.6e-31 138.3 94 70.2
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.8e-30 136.0 93 67.7
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 3.0e-30 135.2 82 75.6
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 5.2e-30 134.4 81 72.8
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.5e-29 132.9 82 74.4
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 1.5e-29 132.9 95 66.3
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 2.0e-29 132.5 82 73.2
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 2.0e-29 132.5 95 65.3
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.7e-28 129.4 98 64.3
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 3.7e-28 128.3 82 72.0
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 5.4e-27 124.4 95 62.1
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 9.1e-27 123.6 92 65.2
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.5e-26 121.7 79 73.4
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 4.5e-26 121.3 86 67.4
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 7.7e-26 120.6 81 71.6
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 1.7e-25 119.4 81 71.6
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 6.5e-25 117.5 86 62.8
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 2.5e-24 115.5 82 64.6
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.1e-23 112.5 80 70.0
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 6.1e-23 110.9 80 62.5
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.2e-21 106.7 80 61.2
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.5e-21 106.3 81 65.4
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.3e-20 103.2 74 66.2
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 8.3e-20 100.5 74 64.9
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.5e-18 95.1 80 57.5
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 2.3e-17 92.4 101 48.5
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 2.3e-17 92.4 101 48.5
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 2.3e-17 92.4 101 48.5
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 3.8e-17 91.7 62 66.1
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.1e-16 90.1 85 52.9
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 3.4e-13 78.6 48 72.9
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 4.1e-11 71.6 51 72.5
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 3.9e-09 65.1 80 45.0
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.2e-07 60.1 82 42.7


User provided reference genes

Program Settings