Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.0e-66 256.5 123 100.0
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.2e-56 223.0 123 83.7
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.2e-56 223.0 123 83.7
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 4.7e-56 221.1 122 82.8
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 6.2e-56 220.7 123 82.1
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 3.1e-55 218.4 122 83.6
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 5.2e-55 217.6 123 82.9
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 6.9e-55 217.2 123 82.9
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 9.0e-55 216.9 123 79.7
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.2e-54 216.5 123 81.3
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 2.0e-54 215.7 123 80.5
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 4.4e-54 214.5 123 78.0
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 5.8e-54 214.2 122 81.1
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 7.6e-54 213.8 123 75.6
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.6e-54 213.8 123 75.6
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.6e-54 213.8 123 75.6
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 7.6e-54 213.8 123 78.0
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 7.6e-54 213.8 123 76.4
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 9.9e-54 213.4 123 79.7
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 9.9e-54 213.4 123 78.9
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.3e-53 213.0 123 75.6
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.7e-53 212.6 123 79.7
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 2.2e-53 212.2 123 78.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 2.2e-53 212.2 123 80.5
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 2.9e-53 211.8 123 78.0
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 3.8e-53 211.5 123 76.4
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 3.8e-53 211.5 122 80.3
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 3.8e-53 211.5 123 76.4
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 3.8e-53 211.5 123 78.9
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 4.9e-53 211.1 123 80.5
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 4.9e-53 211.1 123 77.2
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.1e-52 209.9 123 78.0
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.1e-52 209.9 123 77.2
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.4e-52 209.5 123 75.6
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 1.4e-52 209.5 122 79.5
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.9e-52 209.1 123 78.9
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 2.4e-52 208.8 123 78.9
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 3.2e-52 208.4 123 78.0
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 3.2e-52 208.4 123 78.9
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 5.4e-52 207.6 123 75.6
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 9.3e-52 206.8 123 78.0
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 2.1e-51 205.7 123 75.6
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 2.7e-51 205.3 123 75.6
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 2.7e-51 205.3 123 74.0
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 4.6e-51 204.5 123 77.2
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 4.6e-51 204.5 123 77.2
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 6.0e-51 204.1 120 77.5
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 6.0e-51 204.1 123 76.4
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 7.8e-51 203.8 123 76.4
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 7.8e-51 203.8 122 76.2
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 1.0e-50 203.4 123 74.8
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.3e-50 203.0 123 75.6
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 1.3e-50 203.0 123 74.0
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 1.3e-50 203.0 123 74.0
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 3.0e-50 201.8 123 75.6
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 3.0e-50 201.8 123 75.6
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 3.0e-50 201.8 123 72.4
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 3.9e-50 201.4 121 76.0
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 3.9e-50 201.4 123 76.4
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 3.9e-50 201.4 123 76.4
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 6.6e-50 200.7 123 78.0
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 6.6e-50 200.7 123 75.6
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 8.7e-50 200.3 123 75.6
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 8.7e-50 200.3 145 63.4
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 8.7e-50 200.3 123 70.7
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.5e-49 199.5 123 74.8
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.5e-49 199.5 123 74.0
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 1.5e-49 199.5 123 74.0
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.9e-49 199.1 123 70.7
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.9e-49 199.1 122 75.4
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 2.5e-49 198.7 123 70.7
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 5.6e-49 197.6 123 73.2
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 9.6e-49 196.8 123 74.0
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 1.3e-48 196.4 123 74.0
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 2.1e-48 195.7 123 72.4
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 2.1e-48 195.7 123 75.6
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 2.8e-48 195.3 123 72.4
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 6.2e-48 194.1 123 69.9
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 5.3e-47 191.0 123 68.3
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 2.6e-46 188.7 111 79.3
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 3.4e-46 188.3 123 68.3
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 3.4e-46 188.3 115 76.5
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 2.2e-45 185.7 109 78.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 6.4e-45 184.1 122 63.9
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 4.2e-44 181.4 123 65.9
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 9.3e-44 180.3 112 75.0
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.2e-43 179.9 112 75.0
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 1.6e-43 179.5 108 76.9
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 6.0e-43 177.6 109 68.8
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.8e-42 176.0 109 68.8
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.7e-40 168.3 94 76.6
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 2.0e-38 162.5 103 70.9
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 7.6e-38 160.6 131 58.0
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 1.6e-35 152.9 93 71.0
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 7.9e-35 150.6 96 66.7
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 5.1e-34 147.9 94 70.2
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 5.6e-33 144.4 126 52.4
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 8.2e-32 140.6 90 67.8
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 4.0e-31 138.3 119 51.3
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 5.3e-31 137.9 122 54.9
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 5.8e-30 134.4 155 51.6
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 8.7e-26 120.6 125 43.2
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-25 119.4 116 51.7
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 2.2e-24 115.9 104 53.8
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.7e-24 115.2 89 60.7
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 8.2e-24 114.0 121 43.8
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.1e-23 113.6 69 75.4
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 2.4e-23 112.5 57 93.0
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 4.1e-23 111.7 75 61.3
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.0e-21 107.1 66 72.7
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 3.8e-21 105.1 100 42.0
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 1.0e-18 97.1 75 60.0
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.5e-17 93.2 52 80.8
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 9.4e-12 73.9 113 36.3
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 8.2e-08 60.8 43 62.8


User provided reference genes

Program Settings