Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 3.2e-119 431.8 219 100.0
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.2e-99 364.4 219 86.8
Hma1.2p1_0949F.1_g240650 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 7.1e-71 271.2 165 87.3
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.2e-47 191.4 200 52.0
Hma1.2p1_0340F.1_g129910 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 2.0e-41 173.3 99 88.9
Hma1.2p1_1271F.1_g271740 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 2.0e-41 173.3 98 90.8
Hma1.2p1_2873F.1_g329710 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.9e-39 166.8 95 90.5
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.6e-38 163.7 184 48.4
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.3e-37 159.8 184 47.8
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.4e-36 155.6 208 46.2
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 8.2e-35 151.4 205 44.4
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.0e-32 144.4 209 44.0
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.5e-31 139.8 209 42.1
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.1e-30 135.2 210 39.5
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.2e-27 126.7 185 43.8
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-26 123.2 171 43.3
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.2e-21 105.5 180 38.9
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.2e-20 104.4 82 62.2
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 9.8e-20 101.3 173 37.6
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.7e-17 91.7 166 38.6
Hund10328 Selenicereus undatus HOM05D000034 ORTHO05D010947 1.7e-16 90.5 137 40.9
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.5e-15 86.7 85 50.6
Hund03621 Selenicereus undatus HOM05D000034 ORTHO05D010947 4.2e-15 85.9 134 40.3
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 2.1e-14 83.6 220 27.3
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-13 80.1 220 30.0
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.2e-12 77.8 218 31.2
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-12 77.4 209 29.7
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 3.4e-12 76.3 230 27.8
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 7.5e-12 75.1 218 29.8
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.4e-10 70.1 214 26.6
CSS0018738 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.1e-10 69.7 70 48.6
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 5.4e-10 68.9 214 26.2
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.2e-10 68.2 206 27.7
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 1.2e-09 67.8 148 33.8
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 1.2e-09 67.8 207 27.5
Hund22994 Selenicereus undatus HOM05D012237 ORTHO05D010947 1.2e-09 67.8 48 62.5
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 2.0e-09 67.0 214 27.1
Hund01843 Selenicereus undatus HOM05D012237 ORTHO05D010947 2.0e-09 67.0 75 45.3
Hund09581 Selenicereus undatus HOM05D012237 ORTHO05D010947 2.0e-09 67.0 52 59.6
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 2.7e-09 66.6 223 29.1
Hund18367 Selenicereus undatus HOM05D012237 ORTHO05D010947 2.7e-09 66.6 50 60.0
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 5.0e-08 62.4 208 28.8
AUR62008529 Chenopodium quinoa HOM05D005504 ORTHO05D002688 8.6e-08 61.6 196 31.6
arahy.Tifrunner.gnm1.ann1.WRA5CI Arachis hypogaea HOM05D000034 ORTHO05D002688 1.1e-07 61.2 169 27.8
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.5e-07 60.8 211 26.5
Hund19303 Selenicereus undatus HOM05D000665 ORTHO05D000140 1.5e-07 60.8 75 46.7
Hund21779 Selenicereus undatus HOM05D012237 ORTHO05D010947 1.5e-07 60.8 48 56.2
Hund13318 Selenicereus undatus HOM05D012237 ORTHO05D010947 1.9e-07 60.5 45 57.8
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 2.5e-07 60.1 197 26.9
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 7.3e-07 58.5 267 22.5
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 9.5e-07 58.2 221 24.9
Lj1g0008887 Lotus japonicus HOM05D000034 ORTHO05D002688 1.6e-06 57.4 133 31.6
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 3.6e-06 56.2 229 27.9
MBI01_g10235_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.7e-06 55.8 221 25.8
Hund04038 Selenicereus undatus HOM05D012237 ORTHO05D010947 4.7e-06 55.8 48 54.2
Sc05g0005210 Simmondsia chinensis HOM05D000034 ORTHO05D010947 4.7e-06 55.8 76 42.1
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 6.1e-06 55.5 169 26.0
Lj1g0004986 Lotus japonicus HOM05D000034 ORTHO05D002688 6.1e-06 55.5 133 30.8
Hund00253 Selenicereus undatus HOM05D012237 ORTHO05D010947 6.1e-06 55.5 75 45.3
Hund08188 Selenicereus undatus HOM05D012237 ORTHO05D010947 6.1e-06 55.5 48 50.0
Hund09969 Selenicereus undatus HOM05D012237 ORTHO05D010947 6.1e-06 55.5 42 61.9
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 8.0e-06 55.1 203 24.1


User provided reference genes

Program Settings