Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0131F.1_g060580 Hydrangea macrophylla HOM05D000188 ORTHO05D000362 1.7e-152 542.7 287 100.0
Dinv28140 Davidia involucrata HOM05D000188 ORTHO05D000362 3.6e-54 216.1 297 46.1
Dinv28142 Davidia involucrata HOM05D000188 ORTHO05D000362 3.0e-53 213.0 281 45.6
CSS0020365 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 1.3e-43 181.0 263 44.5
CSS0036392 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 1.1e-42 177.9 290 45.2
Actinidia32595 Actinidia chinensis HOM05D000188 ORTHO05D000362 1.2e-41 174.5 296 41.9
CSS0033497 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 2.2e-40 170.2 239 45.2
Lj3A854T82 Lonicera japonica HOM05D000188 ORTHO05D000362 2.9e-32 143.3 281 38.1
TAR629G3173 Trochodendron aralioides HOM05D000188 ORTHO05D000362 1.5e-31 141.0 242 40.5
TAR629G2408 Trochodendron aralioides HOM05D000188 ORTHO05D000362 6.8e-29 132.1 246 38.6
Cfa015099 Carpinus fangiana HOM05D000188 ORTHO05D000362 7.0e-26 122.1 307 36.5
Cfa010603 Carpinus fangiana HOM05D000188 ORTHO05D000362 9.1e-26 121.7 264 34.8
Cfa010600 Carpinus fangiana HOM05D000188 ORTHO05D000362 2.0e-25 120.6 277 34.7
Cfa010606 Carpinus fangiana HOM05D000188 ORTHO05D000362 5.9e-25 119.0 300 34.0
QL03p041845 Quercus lobata HOM05D000188 ORTHO05D000362 5.9e-25 119.0 265 37.7
QL03p041715 Quercus lobata HOM05D000188 ORTHO05D000362 1.3e-24 117.9 268 36.2
GSVIVG01010251001 Vitis vinifera HOM05D000188 ORTHO05D000362 1.7e-24 117.5 232 37.9
CSS0027220 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 4.2e-23 112.8 213 37.1
DCAR_026848 Daucus carota HOM05D000188 ORTHO05D000362 5.5e-23 112.5 249 35.3
CSS0005608 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 7.2e-23 112.1 213 37.1
QL03p041700 Quercus lobata HOM05D000188 ORTHO05D000362 2.8e-22 110.2 266 35.0
vmacro10785 Vaccinium macrocarpon HOM05D000188 ORTHO05D000362 2.8e-22 110.2 351 29.3
Haze_03536 Corylus avellana HOM05D000188 ORTHO05D000362 8.0e-22 108.6 279 34.8
Duzib251G0449 Durio zibethinus HOM05D000188 ORTHO05D000362 3.0e-21 106.7 282 32.3
Oeu050340.1 Olea europaea HOM05D000188 ORTHO05D000362 3.0e-21 106.7 283 32.2
TAR629G2785 Trochodendron aralioides HOM05D000188 ORTHO05D000362 4.0e-21 106.3 245 34.3
Oeu015697.1 Olea europaea HOM05D000188 ORTHO05D000362 1.2e-20 104.8 273 31.9
QL03p041633 Quercus lobata HOM05D000188 ORTHO05D000362 2.6e-20 103.6 282 35.1
Rhsim06G0167800 Rhododendron simsii HOM05D000188 ORTHO05D000362 5.7e-20 102.4 219 36.5
Haze_03531 Corylus avellana HOM05D000188 ORTHO05D000362 1.7e-19 100.9 187 38.0
Duzib251G0302 Durio zibethinus HOM05D000188 ORTHO05D000362 1.7e-19 100.9 292 30.1
Cc00_g00880 Coffea canephora HOM05D000188 ORTHO05D000362 2.2e-19 100.5 291 32.3
GSVIVG01010254001 Vitis vinifera HOM05D000188 ORTHO05D000362 1.8e-18 97.4 217 32.3
Potri.008G143450 Populus trichocarpa HOM05D000188 ORTHO05D000362 3.2e-18 96.7 274 29.9
Lj3A854T78 Lonicera japonica HOM05D000188 ORTHO05D000362 5.4e-18 95.9 189 39.2
Ciclev10004116m.g Citrus clementina HOM05D000188 ORTHO05D000362 7.0e-18 95.5 315 32.1
Lj6A725T109 Lonicera japonica HOM05D000188 ORTHO05D000362 1.6e-17 94.4 225 33.8
Potri.008G143000 Populus trichocarpa HOM05D000188 ORTHO05D000362 3.5e-17 93.2 273 31.1
vmacro10782 Vaccinium macrocarpon HOM05D000188 ORTHO05D000362 3.5e-17 93.2 224 30.4
Gohir.D01G202900 Gossypium hirsutum HOM05D000188 ORTHO05D000362 4.5e-17 92.8 274 30.7
Gohir.D01G137401 Gossypium hirsutum HOM05D000188 ORTHO05D000362 5.0e-16 89.4 274 30.3
Gorai.008G013300 Gossypium raimondii HOM05D000188 ORTHO05D000362 1.1e-15 88.2 274 29.9
Potri.008G142960 Populus trichocarpa HOM05D000188 ORTHO05D000362 1.5e-15 87.8 269 30.1
TWI77G0333 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 3.3e-15 86.7 223 30.9
RcHm_v2.0_Chr4g0445961 Rosa chinensis HOM05D000188 ORTHO05D000362 4.3e-15 86.3 222 29.7
Cpa.g.sc2.99 Carica papaya HOM05D000188 ORTHO05D000362 5.6e-15 85.9 280 30.0
CiPaw.05G203700 Carya illinoinensis HOM05D000188 ORTHO05D000362 5.6e-15 85.9 306 32.4
MELO3C022590.2 Cucumis melo HOM05D000188 ORTHO05D000362 9.5e-15 85.1 226 29.2
Nn4g24868 Nelumbo nucifera HOM05D000188 ORTHO05D000362 9.5e-15 85.1 231 29.4
Prupe.1G087400 Prunus persica HOM05D000188 ORTHO05D000362 1.6e-14 84.3 229 28.8
vmacro08701 Vaccinium macrocarpon HOM05D000188 ORTHO05D000362 2.8e-14 83.6 214 31.3
Manes.10G063700 Manihot esculenta HOM05D000188 ORTHO05D000362 3.6e-14 83.2 269 30.1
QL03p041773 Quercus lobata HOM05D000188 ORTHO05D000362 3.6e-14 83.2 246 33.3
Dinv06212 Davidia involucrata HOM05D000188 ORTHO05D000362 4.7e-14 82.8 76 56.6
CsaV3_5G012510 Cucumis sativus L. HOM05D000188 ORTHO05D000362 1.4e-13 81.3 229 30.1
Ciclev10006899m.g Citrus clementina HOM05D000188 ORTHO05D000362 8.9e-13 78.6 198 35.4
CANSAT78G1684 Cannabis sativa HOM05D000188 ORTHO05D000362 2.0e-12 77.4 280 28.9
ClCG11G000790 Citrullus lanatus HOM05D000188 ORTHO05D000362 2.6e-12 77.0 238 29.0
Sabra08G0108700 Salix brachista HOM05D000188 ORTHO05D000362 2.6e-12 77.0 312 26.3
PGR031G3985 Punica granatum HOM05D000188 ORTHO05D000362 3.4e-12 76.6 288 28.8
PGR031G2074 Punica granatum HOM05D000188 ORTHO05D000362 4.4e-12 76.3 233 30.0
Haze_01574 Corylus avellana HOM05D000188 ORTHO05D000362 1.3e-11 74.7 251 30.3
Dinv07692 Davidia involucrata HOM05D000188 ORTHO05D000362 1.3e-11 74.7 76 55.3
FvH4_4g36180 Fragaria vesca HOM05D000188 ORTHO05D000362 1.3e-11 74.7 247 27.9
SGA_v2.0_scaffold17G08142 Striga asiatica HOM05D000188 ORTHO05D000362 1.3e-11 74.7 219 30.1
Dinv17113 Davidia involucrata HOM05D000188 ORTHO05D000362 2.2e-11 73.9 132 40.9
Lj3A657T32 Lonicera japonica HOM05D000188 ORTHO05D000362 2.2e-11 73.9 154 37.7
Migut.G00992 Erythranthe guttata HOM05D000188 ORTHO05D000362 4.9e-11 72.8 227 30.0
CiPaw.05G204600 Carya illinoinensis HOM05D000188 ORTHO05D000362 1.4e-10 71.2 221 31.7
PSO210G0175 Papaver somniferum HOM05D000188 ORTHO05D000362 1.9e-10 70.9 243 27.6
RcHm_v2.0_Chr4g0445971 Rosa chinensis HOM05D000188 ORTHO05D000362 2.4e-10 70.5 222 31.1
EL10Ac1g00542 Beta vulgaris HOM05D000188 ORTHO05D000362 3.2e-10 70.1 296 26.4
Migut.G00809 Erythranthe guttata HOM05D000188 ORTHO05D000362 7.0e-10 68.9 251 27.9
Peaxi162Scf00185g00112 Petunia axillaris HOM05D000188 ORTHO05D000362 9.2e-10 68.6 261 32.2
Rhsim09G0081400 Rhododendron simsii HOM05D000188 ORTHO05D000362 9.2e-10 68.6 360 25.6
Dinv17116 Davidia involucrata HOM05D000188 ORTHO05D000362 2.0e-09 67.4 272 28.3
Lalb_Chr07g0188121 Lupinus albus HOM05D000188 ORTHO05D000362 2.7e-09 67.0 283 26.1
Thecc.02G296600 Theobroma cacao HOM05D000188 ORTHO05D000362 2.7e-09 67.0 214 29.9
Migut.D01164 Erythranthe guttata HOM05D000188 ORTHO05D000362 3.5e-09 66.6 188 24.5
Sed0007900 Sechium edule HOM05D000188 ORTHO05D000362 4.6e-09 66.2 228 28.1
Migut.G01075 Erythranthe guttata HOM05D000188 ORTHO05D000362 6.0e-09 65.9 289 26.3
Manes.10G063001 Manihot esculenta HOM05D000188 ORTHO05D000362 7.8e-09 65.5 189 30.7
Aqoxy3G02619 Aquilegia oxysepala HOM05D000188 ORTHO05D000362 1.0e-08 65.1 276 24.6
Manes.02G203150 Manihot esculenta HOM05D000188 ORTHO05D000362 1.3e-08 64.7 216 29.6
Sabra08G0108400 Salix brachista HOM05D000188 ORTHO05D000362 6.6e-08 62.4 337 27.0
ECA233G4439 Erigeron canadensis HOM05D000188 ORTHO05D000362 1.1e-07 61.6 261 26.1
Manes.02G203201 Manihot esculenta HOM05D000188 ORTHO05D000362 1.5e-07 61.2 215 28.4
Dinv17109 Davidia involucrata HOM05D000188 ORTHO05D000362 1.9e-07 60.8 183 33.3
Glyma.05G135000 Glycine max HOM05D000188 ORTHO05D000362 1.9e-07 60.8 274 23.4
Medtr0189s0040 Medicago truncatula HOM05D000188 ORTHO05D036512 1.9e-07 60.8 283 24.7
Atru.chr11.1530 Acer truncatum HOM05D000188 ORTHO05D000362 2.5e-07 60.5 101 42.6
CiPaw.05G203800 Carya illinoinensis HOM05D000188 ORTHO05D000362 4.3e-07 59.7 227 29.5
MBI03_g36877_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D000362 5.6e-07 59.3 255 26.7
CAN.G289.42 Capsicum annuum HOM05D000188 ORTHO05D000362 7.3e-07 58.9 276 28.6
AUR62033315 Chenopodium quinoa HOM05D000188 ORTHO05D000362 7.3e-07 58.9 277 30.3
TPR.G25080 Trifolium pratense HOM05D000188 ORTHO05D000362 7.3e-07 58.9 274 24.5
COL.COLO4_27519 Corchorus olitorius HOM05D000188 ORTHO05D000362 9.5e-07 58.5 91 42.9
PSO017G2686 Papaver somniferum HOM05D000188 ORTHO05D000362 9.5e-07 58.5 272 26.8
PSO170G6200 Papaver somniferum HOM05D000188 ORTHO05D000362 9.5e-07 58.5 270 26.7
Lj4g0001732 Lotus japonicus HOM05D000188 ORTHO05D000362 1.2e-06 58.2 229 27.5
Nitab4.5_0000019g0220 Nicotiana tabacum HOM05D000188 ORTHO05D000362 1.6e-06 57.8 284 25.7
AUR62033346 Chenopodium quinoa HOM05D000188 ORTHO05D000362 2.1e-06 57.4 275 29.8
Ciclev10007179m.g Citrus clementina HOM05D000188 ORTHO05D000362 3.6e-06 56.6 139 33.1
arahy.Tifrunner.gnm1.ann1.Z2UJXV Arachis hypogaea HOM05D000188 ORTHO05D000362 4.7e-06 56.2 277 26.0
FvH4_5g34990 Fragaria vesca HOM05D000188 ORTHO05D000362 4.7e-06 56.2 44 52.3
AUR62004329 Chenopodium quinoa HOM05D000188 ORTHO05D000362 6.2e-06 55.8 273 27.8
Migut.G00994 Erythranthe guttata HOM05D000188 ORTHO05D000362 8.0e-06 55.5 221 27.6


User provided reference genes

Program Settings