Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 5.5e-187 657.5 338 100.0
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 2.1e-130 469.5 345 74.8
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 2.6e-112 409.5 369 62.9
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 9.5e-107 391.0 230 89.1
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 6.4e-103 378.3 370 59.2
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 4.6e-101 372.1 366 58.2
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 1.6e-98 363.6 370 57.0
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 2.1e-98 363.2 347 59.9
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 3.6e-98 362.5 353 58.6
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 4.7e-98 362.1 350 58.9
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 6.2e-98 361.7 357 58.0
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 2.3e-97 359.8 351 57.3
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 8.9e-97 357.8 354 56.8
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 5.8e-96 355.1 363 57.0
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 7.6e-96 354.8 371 55.3
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 7.6e-96 354.8 354 56.2
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 7.6e-96 354.8 353 56.9
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.3e-95 354.0 453 50.1
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 2.9e-95 352.8 369 55.3
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 1.9e-94 350.1 353 57.2
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 5.4e-94 348.6 370 56.2
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.2e-93 347.4 371 56.1
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 1.6e-93 347.1 372 55.6
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 2.7e-93 346.3 369 56.6
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 2.7e-93 346.3 371 56.9
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 3.5e-93 345.9 367 53.4
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 4.6e-93 345.5 366 56.8
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 1.0e-92 344.4 357 56.6
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 3.0e-92 342.8 369 54.5
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 3.9e-92 342.4 359 55.7
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.5e-91 340.5 365 55.1
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.9e-91 340.1 360 55.8
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 4.3e-91 339.0 372 55.9
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 9.6e-91 337.8 369 55.8
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.6e-90 337.0 358 56.4
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 2.8e-90 336.3 367 54.8
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 4.7e-90 335.5 376 54.3
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 4.7e-90 335.5 366 56.0
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.8e-89 333.6 385 52.7
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 1.8e-89 333.6 373 52.5
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.8e-89 333.6 374 54.0
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 2.4e-89 333.2 365 54.8
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 2.4e-89 333.2 355 54.6
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 1.2e-88 330.9 363 54.3
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 5.8e-88 328.6 348 55.5
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 1.3e-87 327.4 374 52.4
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 2.2e-87 326.6 345 55.4
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 4.9e-87 325.5 362 53.6
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 8.4e-87 324.7 368 51.6
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 8.4e-87 324.7 407 51.6
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 1.1e-86 324.3 366 52.7
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 1.1e-86 324.3 367 54.2
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 4.2e-86 322.4 367 52.9
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 4.2e-86 322.4 410 50.0
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.4e-86 322.0 367 53.1
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 2.1e-85 320.1 355 54.6
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 2.7e-85 319.7 369 52.3
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 2.7e-85 319.7 355 55.2
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 4.6e-85 318.9 359 54.0
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 6.0e-85 318.5 355 54.9
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.9e-83 313.5 349 54.2
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 3.3e-83 312.8 362 52.5
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 4.3e-83 312.4 380 49.7
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 5.6e-83 312.0 354 55.6
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 2.1e-82 310.1 358 55.0
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 4.8e-82 308.9 363 52.1
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.1e-81 307.8 259 63.3
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.9e-78 297.0 396 48.2
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.2e-78 295.8 374 49.5
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 4.2e-78 295.8 397 48.4
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.3e-76 290.8 281 58.7
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.5e-75 287.3 238 64.7
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 2.5e-75 286.6 230 65.2
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 4.5e-72 275.8 360 48.1
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 1.4e-70 270.8 469 43.7
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 5.1e-68 262.3 364 47.5
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 9.6e-67 258.1 364 45.3
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 2.1e-66 256.9 259 55.6
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 6.2e-66 255.4 386 44.0
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 6.9e-65 251.9 236 56.4
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 1.2e-64 251.1 249 57.4
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 1.7e-63 247.3 356 47.2
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 2.9e-63 246.5 354 45.2
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 1.1e-62 244.6 285 49.8
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 3.2e-62 243.0 254 55.1
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.2e-61 241.1 310 52.3
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 3.5e-61 239.6 271 50.2
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 5.1e-60 235.7 253 54.5
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 8.7e-60 235.0 344 42.7
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 1.1e-59 234.6 312 47.1
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 1.9e-59 233.8 333 45.0
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 5.9e-56 222.2 367 40.9
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 5.9e-56 222.2 242 52.9
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 1.0e-52 211.5 149 69.8
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 1.1e-51 208.0 286 46.5
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.5e-51 206.8 262 48.5
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 7.4e-51 205.3 375 40.0
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 4.1e-49 199.5 251 50.2
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 4.1e-49 199.5 246 50.8
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 6.9e-49 198.7 276 47.5
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 9.4e-46 188.3 233 48.1
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 3.6e-45 186.4 226 46.0
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 3.4e-40 169.9 144 65.3
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 5.0e-39 166.0 372 35.5
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 2.1e-37 160.6 240 45.4
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 3.0e-36 156.8 273 44.3
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.1e-35 154.8 212 49.5
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 1.5e-35 154.5 321 35.2
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 5.7e-35 152.5 372 33.6
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 6.1e-29 132.5 153 52.3
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 6.1e-29 132.5 153 52.3
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 8.2e-26 122.1 211 42.7
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 1.1e-25 121.7 189 42.9
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 1.6e-21 107.8 246 34.1
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 3.6e-21 106.7 200 38.0
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 2.8e-18 97.1 64 73.4
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 2.4e-17 94.0 98 52.0
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 4.1e-17 93.2 95 58.9
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 5.9e-16 89.4 63 73.0
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 4.2e-14 83.2 225 30.7
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 1.8e-12 77.8 92 51.1
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 9.8e-11 72.0 64 62.5
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 4.9e-10 69.7 93 47.3
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 4.9e-10 69.7 93 47.3
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 1.1e-09 68.6 72 51.4


User provided reference genes

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