Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0101F.1_g049290 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 0.0e+00 1090.9 531 100.0
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 9.7e-215 750.4 556 68.7
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 5.2e-208 728.0 555 66.3
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 1.3e-203 713.4 560 66.6
Lj7A498G38 Lonicera japonica HOM05D004435 ORTHO05D005103 4.2e-202 708.4 557 66.6
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 1.2e-199 700.3 560 65.2
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 1.6e-196 689.9 550 64.4
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 7.7e-196 687.6 558 64.0
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 1.9e-194 682.9 567 63.0
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 4.2e-194 681.8 562 64.6
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 1.6e-193 679.9 560 62.7
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 6.1e-193 677.9 563 63.1
TAR374G0936 Trochodendron aralioides HOM05D004435 ORTHO05D005103 2.3e-192 676.0 567 62.8
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 1.3e-190 670.2 562 62.1
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 1.3e-190 670.2 556 63.5
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 3.7e-190 668.7 558 63.1
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.1e-189 667.2 556 62.4
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 1.1e-189 667.2 551 63.2
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 1.4e-189 666.8 562 61.7
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 1.4e-189 666.8 553 62.6
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 3.1e-189 665.6 563 63.8
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 4.1e-189 665.2 560 60.5
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.0e-187 660.6 558 61.6
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.3e-187 660.2 559 61.9
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.3e-187 659.4 558 62.0
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.3e-187 659.4 559 61.9
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 2.9e-187 659.1 559 61.7
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.8e-187 658.7 559 61.9
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 1.1e-186 657.1 562 61.0
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 1.5e-186 656.8 553 61.3
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 8.0e-185 651.0 565 59.8
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 4.4e-183 645.2 554 62.1
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 2.2e-182 642.9 552 60.3
DCAR_008666 Daucus carota HOM05D004435 ORTHO05D005103 2.9e-182 642.5 560 59.5
DCAR_008667 Daucus carota HOM05D004435 ORTHO05D005103 2.9e-182 642.5 560 59.5
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 6.6e-179 631.3 552 60.1
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 1.1e-178 630.6 541 60.4
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 1.5e-178 630.2 545 59.8
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 3.3e-178 629.0 548 59.9
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 3.6e-177 625.5 536 60.8
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 8.0e-177 624.4 553 59.7
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 8.0e-177 624.4 541 60.3
Nitab4.5_0007244g0020 Nicotiana tabacum HOM05D004435 ORTHO05D005103 1.8e-176 623.2 577 57.4
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 3.1e-176 622.5 552 59.6
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 1.5e-175 620.2 531 60.6
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 1.5e-175 620.2 552 58.7
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 2.0e-175 619.8 564 58.3
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 2.6e-175 619.4 553 59.3
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 3.4e-175 619.0 565 58.8
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 4.4e-175 618.6 546 57.5
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 4.4e-175 618.6 548 59.7
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 7.5e-175 617.8 553 58.0
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 8.3e-174 614.4 555 57.3
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 4.1e-173 612.1 542 58.7
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 2.7e-172 609.4 556 57.7
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 7.8e-172 607.8 556 58.1
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 1.5e-170 603.6 558 56.5
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 2.5e-170 602.8 548 59.1
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 1.2e-169 600.5 548 58.9
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 2.1e-169 599.7 562 57.8
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 8.1e-169 597.8 591 58.2
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 2.3e-168 596.3 545 58.5
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 2.6e-167 592.8 592 54.9
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 9.8e-167 590.9 559 55.6
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 3.2e-165 585.9 554 57.9
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 7.1e-165 584.7 544 57.0
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 3.5e-164 582.4 545 57.1
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 2.3e-163 579.7 563 56.5
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 8.6e-163 577.8 553 55.5
MBI06_g46370_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 2.1e-161 573.2 404 69.6
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 2.8e-161 572.8 537 56.4
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 2.0e-159 566.6 573 54.5
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 1.7e-158 563.5 557 55.1
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 2.1e-156 556.6 551 53.5
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 3.9e-155 552.4 536 55.2
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 1.1e-154 550.8 561 53.7
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 2.5e-154 549.7 536 55.2
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 3.3e-154 549.3 536 54.5
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 7.3e-154 548.1 535 53.3
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 9.6e-154 547.7 537 54.4
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 2.8e-153 546.2 535 53.3
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 8.1e-153 544.7 536 54.5
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 1.4e-152 543.9 535 52.9
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 8.9e-152 541.2 537 52.9
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 1.5e-151 540.4 565 52.2
ATR0605G027 Amborella trichopoda HOM05D004435 ORTHO05D005103 2.0e-151 540.0 473 58.6
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 3.4e-151 539.3 537 54.0
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 5.8e-151 538.5 553 53.2
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 7.1e-141 505.0 535 50.8
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 1.3e-139 500.7 542 50.9
Os01g0551900 Oryza sativa ssp. japonica HOM05D004435 ORTHO05D005103 6.6e-139 498.4 384 62.5
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 9.6e-138 494.6 554 48.9
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 2.3e-131 473.4 555 49.2
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 6.9e-128 461.8 535 47.3
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 1.7e-126 457.2 550 47.1
SMO203G0146 Selaginella moellendorffii HOM05D004435 ORTHO05D005103 3.3e-106 389.8 330 56.7
AagrBONN_evm.TU.Sc2ySwM_228.2861 Anthoceros agrestis HOM05D004435 ORTHO05D005103 3.1e-104 383.3 388 50.8
Cpa.g.sc96.46 Carica papaya HOM05D004435 ORTHO05D005103 1.4e-88 331.3 355 51.5
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 5.0e-86 322.8 412 44.2
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 4.5e-79 299.7 382 43.5
Actinidia20096 Actinidia chinensis HOM05D004435 ORTHO05D005103 9.5e-77 292.0 263 57.8
SEGI_18144 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 7.0e-56 222.6 182 58.8
Atru.chr5.691 Acer truncatum HOM05D004435 ORTHO05D005103 1.3e-46 191.8 120 74.2
SEGI_02021 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 8.9e-43 179.1 125 67.2
Cpa.g.sc96.43 Carica papaya HOM05D004435 ORTHO05D005103 1.2e-39 168.7 129 66.7
FAN01G0536 Fragaria x ananassa HOM05D004435 ORTHO05D005103 5.1e-38 163.3 129 65.9
Actinidia20091 Actinidia chinensis HOM05D004435 ORTHO05D005103 1.6e-36 158.3 133 61.7
Atru.chr5.692 Acer truncatum HOM05D004435 ORTHO05D005103 4.7e-36 156.8 102 77.5
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 2.7e-31 141.0 393 29.5
Ca_26677_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 9.0e-27 125.9 74 81.1
PGSC0003DMG400000235 Solanum tuberosum HOM05D004435 ORTHO05D005103 4.5e-18 97.1 85 60.0
HanXRQChr10g0310771 Helianthus annuus HOM05D004435 ORTHO05D005103 2.9e-17 94.4 68 70.6
arahy.Tifrunner.gnm1.ann1.63Q0V0 Arachis hypogaea HOM05D008137 ORTHO05D005103 7.1e-16 89.7 118 45.8
Atru.chr5.687 Acer truncatum HOM05D002476 ORTHO05D002652 1.1e-13 82.4 57 75.4
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 1.5e-10 72.0 92 51.1


User provided reference genes

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