Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0101F.1_g049270 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 0.0e+00 1398.3 660 100.0
Hma1.2p1_0101F.1_g049200 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 0.0e+00 1270.4 679 89.5
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 8.8e-250 867.1 716 60.5
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 6.2e-219 764.6 719 53.7
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 2.0e-217 759.6 730 53.2
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 2.4e-207 726.1 720 50.8
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 4.6e-206 721.8 732 51.5
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 8.7e-205 717.6 721 49.9
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 4.8e-203 711.8 730 51.5
Lj7C498G9 Lonicera japonica HOM05D004435 ORTHO05D005103 2.4e-202 709.5 709 51.1
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 6.4e-200 701.4 730 50.7
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 8.7e-197 691.0 728 49.0
TAR374G0897 Trochodendron aralioides HOM05D004435 ORTHO05D005103 1.5e-196 690.3 742 50.3
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 4.8e-195 685.3 726 48.8
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 2.9e-192 676.0 722 48.8
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 7.9e-190 667.9 722 47.5
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 1.0e-189 667.5 720 48.5
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.3e-189 666.4 722 47.4
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 3.9e-189 665.6 722 47.4
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 6.7e-189 664.8 711 49.4
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.9e-188 663.3 722 47.9
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 2.1e-187 659.8 711 48.1
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.1e-186 657.5 712 48.0
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.8e-186 656.8 712 48.0
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 7.1e-183 644.8 722 46.8
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 2.7e-182 642.9 738 46.3
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 4.6e-182 642.1 680 48.5
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 7.4e-180 634.8 701 48.4
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 3.1e-178 629.4 713 46.7
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 6.9e-178 628.2 715 46.9
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 1.9e-175 620.2 725 47.0
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 2.1e-174 616.7 683 46.6
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 1.0e-173 614.4 728 45.3
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 3.0e-173 612.8 730 44.8
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 1.9e-172 610.1 680 46.3
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 7.4e-172 608.2 718 45.1
Glyma.16G023300 Glycine max HOM05D004435 ORTHO05D005103 2.2e-171 606.7 732 44.4
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 4.8e-171 605.5 730 45.8
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 6.3e-171 605.1 681 47.6
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 1.1e-170 604.4 691 46.2
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 1.8e-170 603.6 691 46.2
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 2.4e-170 603.2 684 45.8
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 4.1e-170 602.4 737 44.1
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 5.3e-170 602.1 677 47.1
Nitab4.5_0007244g0030 Nicotiana tabacum HOM05D004435 ORTHO05D005103 1.2e-169 600.9 679 46.4
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 2.6e-169 599.7 724 45.4
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 2.6e-169 599.7 730 45.3
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 7.7e-169 598.2 722 44.0
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 1.7e-168 597.0 680 45.7
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.1e-167 594.3 708 44.6
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 1.1e-167 594.3 735 43.5
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 5.5e-167 592.0 722 43.5
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 1.2e-166 590.9 729 44.2
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 2.3e-165 586.6 684 46.3
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 3.0e-165 586.3 683 45.8
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 5.1e-165 585.5 698 44.7
DCAR_008669 Daucus carota HOM05D004435 ORTHO05D005103 1.5e-164 583.9 673 45.6
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 9.7e-164 581.3 680 45.0
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 3.1e-162 576.2 682 44.7
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 1.4e-159 567.4 686 44.2
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 7.2e-159 565.1 677 45.1
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 1.6e-158 563.9 688 44.2
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 1.6e-153 547.4 599 47.6
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 2.0e-153 547.0 672 43.9
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 3.5e-153 546.2 669 43.5
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 1.7e-152 543.9 732 41.1
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 1.2e-148 531.2 725 41.4
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 4.8e-147 525.8 687 41.8
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 4.1e-146 522.7 735 40.0
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 5.3e-146 522.3 705 42.3
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 1.6e-142 510.8 687 40.6
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 3.6e-142 509.6 677 41.8
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 2.8e-139 500.0 672 39.9
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 1.8e-138 497.3 688 39.7
CARHR141910 Cardamine hirsuta HOM05D004435 ORTHO05D005103 1.0e-136 491.5 672 39.3
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 2.9e-136 490.0 672 39.4
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 3.3e-135 486.5 672 39.1
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 3.3e-135 486.5 672 38.5
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 5.5e-135 485.7 672 38.5
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 9.5e-135 485.0 672 38.5
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 4.7e-134 482.6 675 39.7
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 6.1e-134 482.3 672 38.2
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 6.3e-131 472.2 672 37.8
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 6.3e-131 472.2 691 38.6
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 1.2e-126 458.0 672 38.1
Aa31LG1G27950 Aethionema arabicum HOM05D004435 ORTHO05D005103 2.5e-119 433.7 667 37.0
HPP92_020188 Vanilla planifolia HOM05D004435 ORTHO05D005103 1.5e-111 407.9 682 36.7
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 3.3e-111 406.8 694 38.0
ATR0605G097 Amborella trichopoda HOM05D004435 ORTHO05D005103 4.7e-110 402.9 712 36.4
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 1.6e-97 361.3 687 34.6
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 2.0e-92 344.4 659 33.5
SEGI_19519 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 5.1e-80 303.1 707 32.0
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 1.0e-72 278.9 369 41.2
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 2.0e-55 221.5 327 39.8
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 2.9e-51 207.6 648 27.6
TPR.G20227 Trifolium pratense HOM05D004435 ORTHO05D005103 5.5e-50 203.4 203 52.2
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 4.4e-47 193.7 293 37.9
Mapoly0001s0466 Marchantia polymorpha HOM05D004435 ORTHO05D005103 9.7e-39 166.0 701 25.2
Psat1g001920 Pisum sativum HOM05D004435 ORTHO05D005103 1.3e-38 165.6 227 39.6
Psat5g173880 Pisum sativum HOM05D004435 ORTHO05D005103 3.7e-30 137.5 187 39.6
Psat5g173920 Pisum sativum HOM05D004435 ORTHO05D005103 3.7e-30 137.5 187 39.6
MapolyY_B0006 Marchantia polymorpha HOM05D004435 ORTHO05D005103 2.0e-12 78.6 201 29.9
Cpa.g.c42981 Carica papaya HOM05D004435 ORTHO05D005103 4.7e-09 67.4 153 28.8
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 9.8e-07 59.7 184 28.8
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 3.7e-06 57.8 59 49.2


User provided reference genes

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