Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 3.7e-65 251.5 138 100.0
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 5.0e-22 108.2 152 44.1
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 1.8e-19 99.8 145 53.8
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 1.8e-19 99.8 151 46.4
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 1.8e-19 99.8 124 52.4
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 1.2e-18 97.1 125 48.0
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 4.4e-18 95.1 152 49.3
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 6.4e-17 91.3 139 51.8
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 1.4e-16 90.1 148 43.9
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 1.4e-16 90.1 139 48.9
Nitab4.5_0002523g0020 Nicotiana tabacum HOM05D007874 ORTHO05D009614 1.2e-15 87.0 146 49.3
Rhsim09G0067000 Rhododendron simsii HOM05D007874 ORTHO05D009614 2.0e-15 86.3 140 50.7
QL01p001738 Quercus lobata HOM05D007874 ORTHO05D009614 3.5e-15 85.5 146 40.4
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 6.0e-15 84.7 137 42.3
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 7.8e-15 84.3 140 40.7
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 7.8e-15 84.3 160 36.9
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 1.0e-14 84.0 145 39.3
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 1.3e-14 83.6 146 45.9
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 3.0e-14 82.4 112 49.1
Haze_11010 Corylus avellana HOM05D007874 ORTHO05D009614 5.0e-14 81.6 138 41.3
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 8.6e-14 80.9 136 48.5
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 1.5e-13 80.1 140 48.6
CiPaw.06G012000 Carya illinoinensis HOM05D007874 ORTHO05D009614 1.5e-13 80.1 145 39.3
Peaxi162Scf00137g00121 Petunia axillaris HOM05D007874 ORTHO05D009614 1.5e-13 80.1 136 39.7
Potri.010G113100 Populus trichocarpa HOM05D007874 ORTHO05D009614 1.9e-13 79.7 135 48.9
Peaxi162Scf00159g00054 Petunia axillaris HOM05D007874 ORTHO05D009614 2.5e-13 79.3 104 61.5
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 2.5e-13 79.3 137 38.7
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 7.3e-13 77.8 136 44.1
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 2.1e-12 76.3 142 37.3
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 2.8e-12 75.9 122 45.1
Eucgr.G02190 Eucalyptus grandis HOM05D007874 ORTHO05D009614 4.0e-11 72.0 121 43.8
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 4.0e-11 72.0 162 38.9
Sed0007191 Sechium edule HOM05D007874 ORTHO05D009614 2.6e-10 69.3 139 43.9
ECA246G3657 Erigeron canadensis HOM05D007874 ORTHO05D009614 4.4e-10 68.6 123 45.5
Nitab4.5_0000742g0160 Nicotiana tabacum HOM05D007874 ORTHO05D009614 5.8e-10 68.2 141 38.3
AT1G70985 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 7.5e-10 67.8 136 44.1
Nitab4.5_0001832g0080 Nicotiana tabacum HOM05D007874 ORTHO05D009614 7.5e-10 67.8 145 45.5
AL2G30530 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 1.7e-09 66.6 128 43.8
Oeu039508.1 Olea europaea HOM05D007874 ORTHO05D009614 2.9e-09 65.9 145 40.7
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 3.7e-09 65.5 95 41.1
SGA_v2.0_scaffold39G15167 Striga asiatica HOM05D007874 ORTHO05D009614 3.7e-09 65.5 146 39.0
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 6.4e-09 64.7 143 41.3
Migut.L00989 Erythranthe guttata HOM05D007874 ORTHO05D009614 8.3e-09 64.3 137 45.3
EL10Ac6g14213 Beta vulgaris HOM05D007874 ORTHO05D009614 1.9e-08 63.2 143 39.2
DCAR_030219 Daucus carota HOM05D007874 ORTHO05D009614 1.9e-08 63.2 144 43.8
RcHm_v2.0_Chr4g0441281 Rosa chinensis HOM05D020194 ORTHO05D009614 1.9e-08 63.2 148 41.2
Migut.F00186 Erythranthe guttata HOM05D007874 ORTHO05D009614 4.1e-08 62.0 139 42.4
Duzib248G1518 Durio zibethinus HOM05D007874 ORTHO05D009614 2.7e-07 59.3 108 40.7
TAR622G1026 Trochodendron aralioides HOM05D032524 ORTHO05D009614 2.7e-07 59.3 105 44.8
Gohir.D01G145200 Gossypium hirsutum HOM05D007874 ORTHO05D009614 3.5e-07 58.9 151 36.4
Prupe.1G324600 Prunus persica HOM05D007874 ORTHO05D009614 3.5e-07 58.9 146 44.5
PGR102G2496 Punica granatum HOM05D007874 ORTHO05D009614 4.6e-07 58.5 149 34.9
A09p41670 Brassica napus HOM05D007874 ORTHO05D009614 3.0e-06 55.8 113 34.5
BraA09t39656Z Brassica rapa HOM05D007874 ORTHO05D009614 3.0e-06 55.8 113 34.5
BcaC05g26216 Brassica carinata HOM05D007874 ORTHO05D009614 8.6e-06 54.3 113 34.5
C05p22280 Brassica napus HOM05D007874 ORTHO05D009614 8.6e-06 54.3 113 34.5
BolC5t30927H Brassica oleracea HOM05D007874 ORTHO05D009614 8.6e-06 54.3 113 34.5


User provided reference genes

Program Settings