Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 0.0e+00 1549.3 778 100.0
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 8.1e-295 1016.9 785 69.6
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 9.0e-286 986.9 782 68.0
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.9e-283 979.2 782 66.6
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 7.0e-262 907.5 782 63.0
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 9.8e-232 807.4 784 58.0
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.6e-229 800.0 791 56.5
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.9e-211 740.0 789 53.7
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.9e-207 725.3 592 65.4
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-205 719.5 792 54.3
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-205 719.5 792 54.3
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-205 719.5 792 54.3
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-205 719.5 792 54.3
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 3.2e-190 669.5 747 53.7
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-181 641.0 747 51.8
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 8.4e-175 618.2 785 47.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 8.4e-175 618.2 785 47.9
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 1.4e-174 617.5 786 48.3
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 4.6e-173 612.5 784 47.8
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 3.1e-169 599.7 581 58.2
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 1.4e-156 557.8 626 52.6
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 1.4e-156 557.8 626 52.6
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 5.7e-155 552.4 799 45.9
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 1.2e-139 501.5 455 61.1
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-132 476.1 725 44.0
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.6e-131 473.8 747 43.4
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-131 473.4 747 43.4
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 8.3e-130 468.8 580 49.3
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 2.7e-128 463.8 616 45.8
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 1.5e-115 421.4 658 44.1
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 4.4e-115 419.9 481 52.0
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.5e-115 419.1 705 41.3
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 9.8e-115 418.7 469 52.5
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 1.3e-114 418.3 478 51.9
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 7.8e-112 409.1 466 50.0
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 8.6e-111 405.6 389 60.2
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 3.3e-110 403.7 631 41.8
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 8.9e-108 395.6 353 62.3
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-107 395.2 397 56.4
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-107 392.9 684 40.6
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 8.3e-106 389.0 445 54.2
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 4.1e-105 386.7 398 53.5
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.6e-104 383.3 684 40.4
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.6e-104 383.3 684 40.4
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.6e-103 379.0 659 41.1
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 7.3e-102 375.9 389 52.4
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 2.8e-101 374.0 793 36.2
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-99 367.9 651 40.9
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 6.4e-98 362.8 389 50.9
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.3e-94 350.1 285 67.0
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.3e-94 349.4 672 39.7
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 4.9e-90 336.7 286 65.4
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 7.1e-89 332.8 305 56.7
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.3e-86 323.9 643 37.8
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 4.3e-86 323.6 358 50.3
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 9.6e-86 322.4 478 45.2
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 1.2e-80 305.4 266 65.0
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.1e-78 298.9 622 37.3
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 3.5e-72 277.3 328 52.4
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 6.0e-72 276.6 370 48.6
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 1.8e-71 275.0 259 56.4
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.1e-69 268.1 493 38.3
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 4.0e-68 263.8 493 37.5
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 3.3e-62 244.2 187 69.5
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 7.4e-62 243.0 423 40.9
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-61 241.9 384 43.8
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 7.1e-57 226.5 216 61.1
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.3e-55 222.2 277 50.9
Gohir.1Z049494 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.1e-55 220.3 495 33.9
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 1.1e-54 219.2 194 57.2
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-52 209.5 211 55.5
Gohir.D11G334275 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.0e-50 206.1 320 41.9
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 1.1e-49 202.6 176 60.8
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 1.2e-48 199.1 160 65.6
Gohir.D11G237240 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.2e-48 199.1 320 40.6
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.0e-47 196.1 183 63.4
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-47 195.7 203 56.7
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 8.2e-45 186.4 170 62.4
Gorai.004G219800 Gossypium raimondii HOM05D001070 ORTHO05D005132 9.1e-44 183.0 320 39.4
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.2e-43 182.6 184 58.7
Gohir.A09G039280 Gossypium hirsutum HOM05D001070 ORTHO05D005132 2.0e-43 181.8 325 38.2
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.9e-42 177.9 458 33.6
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.9e-42 177.9 458 33.6
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 5.5e-41 173.7 148 67.6
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.1e-40 171.8 136 66.9
Peaxi162Scf00080g00527 Petunia axillaris HOM05D001070 ORTHO05D036944 3.6e-40 171.0 162 59.3
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.1e-38 166.0 107 72.9
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-37 162.2 369 34.1
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 4.1e-36 157.5 117 60.7
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 7.7e-35 153.3 138 60.9
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-34 152.5 285 37.9
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 8.5e-34 149.8 102 76.5
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 2.5e-33 148.3 229 44.1
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.8e-31 139.8 122 60.7
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 4.4e-30 137.5 172 48.8
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.8e-28 132.1 173 52.0
GSVIVG01019173001 Vitis vinifera HOM05D000216 ORTHO05D000634 2.4e-28 131.7 101 67.3
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.6e-27 129.0 114 54.4
Medtr2g039370 Medicago truncatula HOM05D001070 ORTHO05D005132 1.0e-26 126.3 152 47.4
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.3e-26 125.9 123 56.9
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-26 125.9 149 47.7
Nitab4.5_0006502g0050 Nicotiana tabacum HOM05D001070 ORTHO05D036944 2.5e-25 121.7 156 48.7
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.4e-23 115.9 123 53.7
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-23 115.5 206 37.4
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 4.0e-23 114.4 136 44.9
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.5e-22 112.5 191 39.3
GSVIVG01029921001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.0e-22 112.1 110 60.9
Gorai.011G078900 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.8e-21 108.2 92 53.3
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 3.7e-21 107.8 84 65.5
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 3.7e-21 107.8 237 32.9
Nitab4.5_0007400g0070 Nicotiana tabacum HOM05D001070 ORTHO05D036944 3.7e-21 107.8 153 45.8
Medtr6g042180 Medicago truncatula HOM05D001070 ORTHO05D005132 1.1e-20 106.3 92 54.3
Nitab4.5_0010788g0060 Nicotiana tabacum HOM05D001070 ORTHO05D028533 7.0e-20 103.6 140 44.3
Gohir.D09G079833 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.6e-19 102.4 73 64.4
arahy.Tifrunner.gnm1.ann1.1Y8W5R Arachis hypogaea HOM05D001070 ORTHO05D018510 1.0e-18 99.8 88 58.0
Solyc01g009550.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.8e-18 97.8 84 67.9
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 1.9e-17 95.5 92 52.2
Nitab4.5_0006502g0060 Nicotiana tabacum HOM05D001070 ORTHO05D005132 2.5e-17 95.1 201 31.8
arahy.Tifrunner.gnm1.ann1.LH3NEH Arachis hypogaea HOM05D001070 ORTHO05D005132 2.7e-16 91.7 239 36.0
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.7e-16 90.9 106 50.0
Nn029s41576 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.4e-15 89.4 82 58.5
SEGI_27427 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 2.3e-15 88.6 174 35.1
SEGI_20187 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 5.2e-15 87.4 170 35.3
SEGI_30878 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 5.2e-15 87.4 170 35.3
SEGI_36485 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 5.2e-15 87.4 170 35.3
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 1.2e-14 86.3 122 45.1
Solyc10g047390.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.4e-14 84.7 84 54.8
Medtr1g051590 Medicago truncatula HOM05D000533 ORTHO05D001069 5.7e-14 84.0 174 37.4
Solyc02g011830.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.7e-14 84.0 67 61.2
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.5e-14 83.6 59 69.5
arahy.Tifrunner.gnm1.ann1.IUHB90 Arachis hypogaea HOM05D001070 ORTHO05D005132 1.3e-13 82.8 97 49.5
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-13 80.9 76 55.3
SEGI_38135 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 4.8e-13 80.9 120 40.0
SEGI_01987 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.1e-12 79.7 170 33.5
Potri.013G075166 Populus trichocarpa HOM05D001070 ORTHO05D005132 2.4e-12 78.6 98 52.0
Medtr7g104140 Medicago truncatula HOM05D001070 ORTHO05D005132 5.4e-12 77.4 72 51.4
BolC9t56920H Brassica oleracea HOM05D001070 ORTHO05D031339 2.9e-10 71.6 77 53.2
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 6.6e-10 70.5 38 76.3
Peaxi162Scf00080g00528 Petunia axillaris HOM05D001070 ORTHO05D028533 8.6e-10 70.1 112 42.9
Lj9P89T23 Lonicera japonica HOM05D001070 ORTHO05D005132 3.3e-09 68.2 66 63.6
Medtr1g037160 Medicago truncatula HOM05D001070 ORTHO05D005132 1.2e-08 66.2 146 40.4
GSVIVG01000801001 Vitis vinifera HOM05D001070 ORTHO05D005132 8.9e-07 60.1 52 69.2
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 7.5e-06 57.0 127 35.4


User provided reference genes

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