Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0088F.1_g045220 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 3.1e-89 331.6 155 100.0
Hma1.2p1_1073F.1_g254250 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 9.0e-28 127.5 61 98.4
Cc09_g05210 Coffea canephora HOM05D003739 ORTHO05D003996 1.5e-14 83.6 71 60.6
CSS0038123 Camellia sinensis var. sinensis HOM05D003739 ORTHO05D003996 2.5e-14 82.8 61 65.6
vmacro15435 Vaccinium macrocarpon HOM05D003739 ORTHO05D003996 1.1e-12 77.4 62 64.5
CAN.G809.70 Capsicum annuum HOM05D003739 ORTHO05D003996 3.1e-12 75.9 72 51.4
Oeu005537.3 Olea europaea HOM05D003739 ORTHO05D003996 5.3e-12 75.1 61 62.3
Nitab4.5_0006794g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 2.0e-11 73.2 70 54.3
Nitab4.5_0004903g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 2.6e-11 72.8 70 54.3
GSVIVG01023816001 Vitis vinifera HOM05D003739 ORTHO05D003996 2.6e-11 72.8 70 54.3
Nitab4.5_0010401g0020 Nicotiana tabacum HOM05D003739 ORTHO05D003996 4.5e-11 72.0 72 50.0
Sopen02g026250 Solanum pennellii HOM05D003739 ORTHO05D003996 1.0e-10 70.9 66 51.5
PGSC0003DMG402017733 Solanum tuberosum HOM05D003739 ORTHO05D003996 1.7e-10 70.1 56 57.1
CiPaw.06G133400 Carya illinoinensis HOM05D003739 ORTHO05D003996 2.2e-10 69.7 54 57.4
SGA_v2.0_scaffold62G21539 Striga asiatica HOM05D003739 ORTHO05D003996 2.2e-10 69.7 61 57.4
Ciclev10027900m.g Citrus clementina HOM05D003739 ORTHO05D003996 3.8e-10 68.9 56 60.7
Prupe.8G091800 Prunus persica HOM05D003739 ORTHO05D003996 5.0e-10 68.6 53 64.2
TWI79G1707 Tripterygium wilfordii HOM05D003739 ORTHO05D003996 5.0e-10 68.6 54 61.1
MSTRG.9105 Avicennia marina HOM05D003739 ORTHO05D003996 1.1e-09 67.4 57 52.6
TAR376G0790 Trochodendron aralioides HOM05D003739 ORTHO05D003996 1.1e-09 67.4 67 50.7
QL11p044151 Quercus lobata HOM05D003739 ORTHO05D003996 4.2e-09 65.5 67 52.2
Cfa005045 Carpinus fangiana HOM05D003739 ORTHO05D003996 5.5e-09 65.1 69 49.3
CiPaw.10G121500 Carya illinoinensis HOM05D003739 ORTHO05D003996 5.5e-09 65.1 54 59.3
Peaxi162Scf00048g01417 Petunia axillaris HOM05D003739 ORTHO05D003996 1.6e-08 63.5 72 47.2
TAR628G0054 Trochodendron aralioides HOM05D003739 ORTHO05D003996 2.1e-08 63.2 67 46.3
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 2.7e-08 62.8 70 47.1
Gohir.A09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 7.9e-08 61.2 52 57.7
Duzib187G1144 Durio zibethinus HOM05D003739 ORTHO05D003996 1.0e-07 60.8 53 58.5
BcaC01g00285 Brassica carinata HOM05D000394 ORTHO05D000299 1.8e-07 60.1 58 53.4
A08p23790 Brassica napus HOM05D003739 ORTHO05D003996 1.8e-07 60.1 58 53.4
C03p77640 Brassica napus HOM05D003739 ORTHO05D003996 1.8e-07 60.1 58 53.4
BolC3t20021H Brassica oleracea HOM05D003739 ORTHO05D003996 1.8e-07 60.1 58 53.4
BraA08t34331Z Brassica rapa HOM05D003739 ORTHO05D003996 1.8e-07 60.1 58 53.4
COL.COLO4_32233 Corchorus olitorius HOM05D003739 ORTHO05D003996 1.8e-07 60.1 53 56.6
Gohir.D09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 3.9e-07 58.9 52 55.8
Gorai.006G107300 Gossypium raimondii HOM05D003739 ORTHO05D003996 3.9e-07 58.9 52 55.8
Manes.11G084700 Manihot esculenta HOM05D003739 ORTHO05D003996 3.9e-07 58.9 52 57.7
Thecc.08G060300 Theobroma cacao HOM05D003739 ORTHO05D003996 3.9e-07 58.9 53 54.7
CANSAT11G0250 Cannabis sativa HOM05D003739 ORTHO05D003996 5.1e-07 58.5 54 53.7
Nn4g24182 Nelumbo nucifera HOM05D003739 ORTHO05D003996 8.8e-07 57.8 55 47.3
VMungo1215G1752 Vigna mungo HOM05D003739 ORTHO05D003996 8.8e-07 57.8 66 50.0
Thhalv10024751m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 1.5e-06 57.0 67 46.3
Potri.010G019600 Populus trichocarpa HOM05D003739 ORTHO05D003996 1.5e-06 57.0 54 53.7
DCAR_004344 Daucus carota HOM05D003739 ORTHO05D003996 2.0e-06 56.6 53 50.9
BcaNung03888 Brassica carinata HOM05D003739 ORTHO05D003996 2.5e-06 56.2 78 38.5
ClCG01G008230 Citrullus lanatus HOM05D003739 ORTHO05D003996 2.5e-06 56.2 52 51.9
MD10G1070200 Malus domestica HOM05D003739 ORTHO05D003996 2.5e-06 56.2 53 54.7
Sed0009728 Sechium edule HOM05D003739 ORTHO05D003996 3.3e-06 55.8 57 49.1
MBI16_g35489_MAGBIO Magnolia biondii HOM05D033968 ORTHO05D003996 7.4e-06 54.7 54 40.7
BcaB03g12246 Brassica carinata HOM05D003739 ORTHO05D003996 9.7e-06 54.3 58 50.0
CARHR106820 Cardamine hirsuta HOM05D003739 ORTHO05D003996 9.7e-06 54.3 58 48.3
MELO3C005063.2 Cucumis melo HOM05D003739 ORTHO05D003996 9.7e-06 54.3 53 49.1


User provided reference genes

Program Settings