Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 6.9e-187 657.1 329 100.0
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 9.5e-120 434.1 331 68.3
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 2.2e-116 422.9 319 66.1
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 4.0e-110 402.1 297 66.0
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 5.8e-109 398.3 319 63.6
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 5.8e-109 398.3 319 64.6
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 7.6e-109 397.9 319 63.3
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 1.1e-107 394.0 319 63.0
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.4e-107 392.9 295 66.1
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 7.1e-107 391.3 319 63.3
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 2.1e-106 389.8 319 63.3
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 3.9e-105 385.6 318 61.6
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 2.5e-104 382.9 340 60.9
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 1.4e-102 377.1 295 63.7
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 2.2e-100 369.8 313 60.1
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 2.9e-100 369.4 297 62.6
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 4.2e-99 365.5 314 59.6
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 2.1e-98 363.2 314 59.2
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.7e-98 362.8 324 57.7
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 6.7e-97 358.2 302 60.3
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.1e-96 357.5 323 56.3
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 2.8e-95 352.8 324 54.9
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 4.8e-95 352.1 318 56.9
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 2.4e-94 349.7 288 61.1
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 2.4e-94 349.7 295 59.0
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 2.6e-93 346.3 301 58.8
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 4.5e-93 345.5 296 59.8
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 5.8e-93 345.1 284 59.9
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 3.2e-91 339.3 312 57.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 9.3e-91 337.8 293 56.0
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.2e-90 337.4 318 56.0
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.2e-90 337.4 296 59.8
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 4.6e-90 335.5 315 56.8
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 4.6e-90 335.5 296 59.8
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 1.3e-89 334.0 310 56.5
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 1.8e-89 333.6 309 55.7
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.0e-89 332.8 311 56.9
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 5.1e-89 332.0 316 56.0
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 1.5e-88 330.5 328 56.4
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 4.3e-88 328.9 311 55.9
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 4.8e-87 325.5 294 56.5
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 8.2e-87 324.7 289 58.5
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 3.1e-86 322.8 293 54.6
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 5.3e-86 322.0 316 54.7
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 1.3e-84 317.4 289 57.4
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 8.4e-84 314.7 296 53.4
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.2e-82 310.8 301 57.5
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 6.0e-82 308.5 321 52.0
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 7.4e-80 301.6 288 54.9
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 9.7e-80 301.2 288 54.9
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 1.3e-79 300.8 292 54.1
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 6.3e-79 298.5 300 54.0
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.4e-78 296.6 296 53.0
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 3.1e-78 296.2 295 53.2
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 7.6e-77 291.6 288 54.2
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 1.7e-76 290.4 222 64.4
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 2.5e-75 286.6 270 55.9
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 5.5e-75 285.4 296 53.0
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 1.6e-74 283.9 314 48.1
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 8.8e-73 278.1 303 47.2
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 1.7e-68 263.8 315 47.9
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.4e-61 239.6 249 52.2
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.2e-58 231.1 296 43.6
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 2.6e-53 213.4 163 65.0
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 9.1e-46 188.3 179 57.0
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 7.7e-45 185.3 138 63.0
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 1.8e-41 174.1 121 71.9
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.5e-35 154.5 217 42.4
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 4.5e-29 132.9 313 31.6
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.1e-25 120.2 86 66.3
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.1e-19 101.7 128 45.3
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 5.6e-19 99.4 44 100.0
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 1.6e-13 81.3 113 43.4


User provided reference genes

Program Settings