Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 8.4e-194 680.2 360 100.0
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 9.6e-81 304.7 347 50.7
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 9.6e-57 224.9 338 43.5
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 4.9e-53 212.6 340 42.4
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 6.5e-53 212.2 474 35.9
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 8.2e-48 195.3 338 39.1
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 4.1e-47 193.0 347 36.9
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 4.1e-47 193.0 348 36.2
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 1.7e-45 187.6 341 39.6
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 2.9e-45 186.8 342 40.6
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 3.8e-45 186.4 346 37.9
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 5.0e-45 186.0 341 39.6
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 5.0e-45 186.0 341 39.6
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 1.1e-44 184.9 341 39.6
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 3.2e-44 183.3 351 35.6
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.2e-43 181.4 338 38.2
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 4.6e-43 179.5 374 35.6
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 7.9e-43 178.7 347 36.9
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 5.7e-41 172.6 342 36.3
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 4.8e-40 169.5 344 35.5
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 8.2e-40 168.7 456 31.4
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.1e-39 168.3 342 36.0
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 1.4e-39 167.9 444 32.2
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.1e-39 166.8 451 31.3
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 1.5e-38 164.5 458 31.0
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 1.5e-38 164.5 339 35.4
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 2.0e-38 164.1 347 34.6
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 2.2e-37 160.6 353 36.5
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 2.9e-37 160.2 449 31.0
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 6.5e-37 159.1 350 32.6
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 8.5e-37 158.7 368 36.7
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 1.1e-36 158.3 380 34.2
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 1.1e-36 158.3 380 34.2
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 3.2e-36 156.8 406 32.3
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 3.2e-36 156.8 484 30.0
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 9.4e-36 155.2 351 31.9
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 9.4e-36 155.2 363 36.1
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 2.7e-35 153.7 353 34.0
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 3.6e-35 153.3 343 33.8
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 4.6e-35 152.9 356 33.7
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 4.6e-35 152.9 432 31.2
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 6.1e-35 152.5 371 31.8
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 7.9e-35 152.1 364 37.4
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.4e-34 151.4 348 31.9
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 3.9e-34 149.8 362 32.6
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 1.1e-33 148.3 401 31.4
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.1e-33 148.3 461 29.9
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 2.0e-33 147.5 379 31.9
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 2.5e-33 147.1 392 31.9
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 3.3e-33 146.7 351 31.9
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 1.7e-32 144.4 342 33.9
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 3.7e-32 143.3 364 32.4
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 8.2e-32 142.1 363 32.2
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 1.8e-31 141.0 373 31.4
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 4.1e-31 139.8 338 32.0
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.3e-31 139.4 473 27.9
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 1.5e-30 137.9 376 34.0
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 5.9e-30 136.0 504 28.2
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 1.3e-29 134.8 341 31.1
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 2.9e-29 133.7 228 39.9
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 2.9e-29 133.7 339 30.1
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 5.0e-29 132.9 342 30.4
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 5.0e-29 132.9 359 35.9
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 1.4e-28 131.3 368 31.0
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 3.2e-28 130.2 342 29.8
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 3.2e-28 130.2 341 30.5
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 3.2e-28 130.2 382 29.1
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 3.2e-28 130.2 341 30.5
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 7.2e-28 129.0 493 28.2
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 9.4e-28 128.6 365 30.4
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 1.2e-27 128.3 353 30.9
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 2.1e-27 127.5 341 30.5
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 2.1e-27 127.5 368 30.7
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 2.7e-27 127.1 375 28.5
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 2.7e-27 127.1 338 30.5
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 3.6e-27 126.7 369 30.9
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 4.7e-27 126.3 342 30.4
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 6.1e-27 125.9 363 30.3
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 1.4e-26 124.8 360 30.0
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 1.4e-26 124.8 341 35.8
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 1.8e-26 124.4 430 27.4
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 1.8e-26 124.4 526 25.9
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.3e-26 124.0 447 28.4
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 5.1e-26 122.9 338 28.7
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 8.8e-26 122.1 343 34.1
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 1.1e-25 121.7 416 31.5
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 2.0e-25 120.9 365 31.2
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 3.3e-25 120.2 384 28.4
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 7.4e-25 119.0 338 30.8
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 7.4e-25 119.0 509 26.9
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 9.7e-25 118.6 338 29.6
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 9.7e-25 118.6 338 29.6
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 1.3e-24 118.2 461 26.9
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 2.2e-24 117.5 494 26.5
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 4.8e-24 116.3 356 28.4
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 4.8e-24 116.3 351 29.9
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 6.3e-24 115.9 447 27.1
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 3.1e-23 113.6 345 35.7
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 2.0e-22 110.9 546 24.7
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 1.7e-21 107.8 568 23.9
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 2.9e-21 107.1 272 31.6
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 2.9e-21 107.1 338 26.6
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 6.5e-21 105.9 500 30.6
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 6.5e-21 105.9 388 28.1
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 8.5e-21 105.5 342 33.0
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 1.6e-19 101.3 495 25.3
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 2.1e-19 100.9 164 37.8
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 1.4e-18 98.2 195 35.9
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 4.0e-18 96.7 210 34.3
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 3.3e-17 93.6 73 58.9
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 2.8e-16 90.5 147 40.8
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 8.2e-16 89.0 65 56.9
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 8.2e-16 89.0 202 31.2
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.4e-15 87.4 82 54.9
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 9.1e-15 85.5 79 50.6
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 1.6e-14 84.7 225 30.7
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 1.3e-13 81.6 82 51.2
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 1.7e-13 81.3 133 38.3
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 2.2e-13 80.9 338 23.1
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 2.2e-13 80.9 122 41.0
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 2.9e-13 80.5 81 53.1
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 2.6e-09 67.4 43 62.8
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.2e-08 64.3 52 44.2


User provided reference genes

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