Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.0e-119 433.3 208 100.0
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 2.9e-114 415.2 207 95.7
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 2.1e-80 302.8 207 71.0
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 3.5e-75 285.4 207 68.1
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 5.9e-75 284.6 207 67.6
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 3.5e-67 258.8 206 61.7
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 3.5e-67 258.8 206 61.7
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 2.7e-59 232.6 207 55.6
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 1.3e-58 230.3 209 56.5
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 7.3e-57 224.6 207 54.1
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 6.1e-56 221.5 207 55.1
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 1.3e-53 213.8 208 53.8
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.7e-53 213.4 223 50.2
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 1.4e-52 210.3 207 50.7
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 1.4e-52 210.3 207 54.6
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 1.9e-52 209.9 208 52.4
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 5.4e-52 208.4 204 54.4
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 1.6e-51 206.8 208 51.0
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 2.7e-51 206.1 207 51.2
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.0e-50 204.1 207 52.2
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 6.2e-48 194.9 228 46.1
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 6.8e-47 191.4 207 48.8
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 2.0e-46 189.9 208 48.1
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 5.8e-46 188.3 208 48.6
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 9.8e-46 187.6 206 51.0
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 2.2e-45 186.4 234 44.9
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 4.9e-45 185.3 234 44.0
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 3.2e-44 182.6 207 48.3
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 3.2e-44 182.6 207 47.8
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 7.0e-44 181.4 241 44.8
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 9.2e-44 181.0 207 47.3
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 9.2e-44 181.0 242 43.4
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 9.2e-44 181.0 242 43.4
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 4.6e-43 178.7 233 44.6
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 4.6e-43 178.7 208 49.5
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 7.8e-43 177.9 207 48.8
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 1.3e-42 177.2 244 44.7
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 1.7e-42 176.8 208 44.7
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 2.3e-42 176.4 212 48.1
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 6.6e-42 174.9 209 46.4
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 1.9e-41 173.3 207 44.9
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 4.3e-41 172.2 208 47.1
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 5.6e-41 171.8 211 47.9
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 1.2e-40 170.6 218 46.3
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 1.2e-40 170.6 193 49.2
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 1.6e-40 170.2 208 46.6
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.6e-40 170.2 235 42.6
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 1.6e-40 170.2 212 45.3
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 1.6e-40 170.2 210 48.1
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 2.1e-40 169.9 208 43.8
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 2.8e-40 169.5 240 41.7
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 3.6e-40 169.1 207 46.4
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 6.2e-40 168.3 214 47.7
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 8.1e-40 167.9 207 47.3
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 1.1e-39 167.5 213 47.4
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 1.4e-39 167.2 243 43.6
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.4e-39 167.2 243 43.6
Hma1.2p1_2087F.1_g313780 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.4e-39 167.2 129 67.4
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 2.3e-39 166.4 207 46.4
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 3.1e-39 166.0 206 44.7
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 4.0e-39 165.6 210 42.4
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 8.9e-39 164.5 206 44.7
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 1.2e-38 164.1 212 47.2
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 1.2e-38 164.1 208 44.2
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 1.5e-38 163.7 215 47.4
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 1.5e-38 163.7 209 42.6
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 5.8e-38 161.8 207 44.9
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 7.5e-38 161.4 206 44.2
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 7.5e-38 161.4 208 45.2
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 2.2e-37 159.8 211 44.1
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 2.9e-37 159.5 207 44.4
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 6.4e-37 158.3 212 45.8
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 1.4e-36 157.1 208 44.2
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 3.2e-36 156.0 211 44.1
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 7.1e-36 154.8 208 44.2
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 9.2e-36 154.5 209 44.0
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 9.2e-36 154.5 209 44.0
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 1.2e-35 154.1 209 42.1
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 1.2e-35 154.1 212 44.8
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 1.6e-35 153.7 214 43.0
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 2.7e-35 152.9 211 42.2
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 2.7e-35 152.9 211 42.2
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 3.5e-35 152.5 208 40.9
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 4.6e-35 152.1 207 42.5
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 6.0e-35 151.8 209 41.6
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 7.8e-35 151.4 210 39.5
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 1.0e-34 151.0 217 41.9
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 1.3e-34 150.6 220 39.1
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 3.0e-34 149.4 121 64.5
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.0e-34 149.4 238 41.2
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 3.9e-34 149.1 206 41.3
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 3.9e-34 149.1 208 40.4
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 5.1e-34 148.7 327 33.3
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 1.5e-33 147.1 213 39.9
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 2.5e-33 146.4 240 37.9
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 3.3e-33 146.0 206 43.7
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 4.3e-33 145.6 208 39.9
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 6.8e-31 138.3 219 38.4
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 4.4e-30 135.6 207 41.1
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 4.4e-30 135.6 212 40.1
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 9.9e-30 134.4 217 42.4
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 7.1e-28 128.3 218 37.2
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 2.1e-27 126.7 213 39.4
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.6e-27 125.6 200 39.0
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 8.7e-26 121.3 244 36.9
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 6.2e-24 115.2 207 37.2
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 8.1e-24 114.8 216 35.2
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 6.9e-23 111.7 207 34.3
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 3.4e-22 109.4 208 33.2
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 3.4e-22 109.4 217 33.6
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 5.8e-22 108.6 206 36.4
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 7.6e-22 108.2 193 37.8
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 5.4e-20 102.1 214 32.7
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 2.3e-18 96.7 217 31.3
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 8.7e-18 94.7 207 30.9
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 9.6e-17 91.3 243 28.4
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 2.8e-16 89.7 91 51.6
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 1.4e-12 77.4 206 28.2
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.9e-12 77.0 195 30.8
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 4.0e-07 59.3 33 75.8
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 3.4e-06 56.2 53 47.2


User provided reference genes

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