Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.7e-247 858.2 441 100.0
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 1.4e-113 414.1 521 52.2
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 3.4e-104 382.9 521 50.3
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 2.0e-72 277.3 521 41.1
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.1e-67 261.5 555 37.7
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.3e-67 260.0 535 38.5
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-66 258.1 507 39.6
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 2.8e-66 256.9 514 39.3
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 6.2e-66 255.8 506 40.3
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.0e-65 253.1 518 39.2
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 9.0e-65 251.9 523 40.0
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 1.5e-64 251.1 521 39.9
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.3e-63 248.1 502 41.0
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 2.2e-63 247.3 518 38.8
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.5e-63 245.7 505 39.0
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.8e-60 237.7 508 39.0
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.3e-60 237.3 498 38.2
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-59 234.6 516 38.4
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.6e-58 231.1 514 39.7
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 6.2e-58 229.2 516 40.1
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 3.1e-57 226.9 485 39.8
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 6.9e-57 225.7 521 37.2
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 1.2e-56 224.9 486 37.7
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 2.0e-56 224.2 391 41.4
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 1.0e-55 221.9 519 38.5
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 8.4e-55 218.8 493 39.8
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 2.5e-54 217.2 496 38.7
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.5e-53 213.4 560 36.2
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 7.4e-51 205.7 503 36.2
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 7.4e-51 205.7 519 35.8
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 1.6e-50 204.5 449 38.1
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 6.9e-49 199.1 403 39.2
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 4.5e-48 196.4 488 35.5
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 3.8e-47 193.4 451 36.6
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 1.9e-46 191.0 454 36.3
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 9.4e-46 188.7 481 36.8
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 1.2e-45 188.3 304 46.4
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.0e-44 185.3 535 33.6
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 3.9e-44 183.3 455 35.6
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 3.9e-44 183.3 516 35.1
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 5.1e-44 183.0 451 37.5
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 8.8e-44 182.2 490 35.3
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.5e-43 181.4 365 41.1
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.5e-43 181.4 382 38.7
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 3.3e-43 180.3 460 36.1
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 5.7e-43 179.5 405 38.8
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 7.4e-43 179.1 489 34.4
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 4.8e-42 176.4 404 38.6
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.1e-41 175.3 398 39.7
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 1.8e-41 174.5 460 35.4
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 4.1e-41 173.3 397 38.5
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 5.3e-41 172.9 489 33.7
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 9.1e-41 172.2 462 35.1
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 9.1e-41 172.2 506 35.0
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 1.2e-40 171.8 462 35.1
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 3.4e-40 170.2 439 35.1
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 3.4e-40 170.2 393 35.9
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 4.5e-40 169.9 529 31.0
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 5.9e-40 169.5 464 36.2
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 5.9e-40 169.5 462 35.5
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 7.7e-40 169.1 397 38.0
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.4e-38 164.9 506 34.4
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.2e-37 161.8 490 33.9
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 2.7e-37 160.6 481 32.4
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 1.8e-36 157.9 545 31.0
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 2.3e-36 157.5 500 32.4
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 2.3e-36 157.5 352 38.6
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.3e-36 157.5 355 36.6
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 1.1e-35 155.2 527 32.3
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 1.5e-35 154.8 321 41.1
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 4.4e-35 153.3 242 44.6
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 2.8e-34 150.6 501 29.9
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 1.1e-33 148.7 350 36.3
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 1.3e-31 141.7 368 33.2
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 6.5e-31 139.4 434 34.8
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 1.5e-30 138.3 338 36.4
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 1.5e-30 138.3 338 36.4
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.2e-30 137.1 289 37.7
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 9.4e-30 135.6 326 36.2
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 1.2e-29 135.2 403 33.5
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 2.1e-29 134.4 486 32.1
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 3.6e-29 133.7 466 33.3
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 1.1e-27 128.6 344 34.6
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 1.5e-27 128.3 451 31.9
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 3.3e-27 127.1 413 33.7
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 4.4e-27 126.7 388 32.0
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 5.7e-27 126.3 451 32.2
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 8.2e-26 122.5 517 31.3
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 1.1e-25 122.1 399 32.1
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 1.6e-24 118.2 400 31.2
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 1.0e-23 115.5 309 36.9
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.9e-23 114.0 370 32.4
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.8e-23 113.6 163 46.0
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 1.0e-20 105.5 440 29.8
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 1.4e-20 105.1 467 26.6
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.8e-20 104.8 523 28.9
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 3.0e-20 104.0 336 31.8
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 9.8e-19 99.0 232 37.5
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 1.1e-17 95.5 172 45.9
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 5.4e-17 93.2 311 32.8
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 9.1e-17 92.4 522 25.9
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 1.2e-16 92.0 307 30.9
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 1.2e-16 92.0 372 27.4
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 4.5e-16 90.1 274 32.5
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 4.5e-16 90.1 238 34.0
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 4.5e-16 90.1 311 30.5
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 3.2e-14 84.0 116 48.3
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 7.2e-14 82.8 96 54.2
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 3.6e-13 80.5 118 45.8
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 3.6e-13 80.5 116 46.6
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 4.7e-13 80.1 118 44.9
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 1.8e-12 78.2 103 53.4
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 3.0e-12 77.4 305 30.2
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 6.8e-12 76.3 334 27.2
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 7.5e-11 72.8 299 31.4
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 4.1e-09 67.0 335 28.4
QL07p039646 Quercus lobata HOM05D005512 ORTHO05D006716 9.2e-09 65.9 261 30.7
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 1.2e-08 65.5 249 30.5
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.2e-08 65.5 89 49.4
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.6e-08 65.1 117 43.6
Actinidia02438 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.7e-08 64.3 112 41.1
ATR0820G116 Amborella trichopoda HOM05D005512 ORTHO05D006716 6.6e-07 59.7 202 34.2
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 6.6e-07 59.7 170 35.3
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 2.5e-06 57.8 60 56.7
HanXRQChr14g0432701 Helianthus annuus HOM05D005512 ORTHO05D006716 3.3e-06 57.4 170 35.3


User provided reference genes

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