Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0079F.1_g041870 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-110 401.4 205 100.0
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.8e-66 255.4 267 58.4
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 3.3e-38 162.5 175 57.1
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-35 153.7 244 39.8
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-26 123.2 306 31.7
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.0e-23 112.5 269 33.1
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.3e-21 105.1 268 31.0
Hma1.2p1_1596F.1_g292760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-20 103.2 248 33.5
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-19 98.2 224 32.6
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.0e-18 95.5 220 32.7
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 9.5e-17 91.3 293 25.3
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-16 89.4 292 27.4
Hma1.2p1_0179F.1_g079390 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-15 87.8 59 74.6
VMungo0251G1185 Vigna mungo HOM05D000002 ORTHO05D000001 1.0e-15 87.8 278 27.7
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-15 87.0 325 23.4
Hma1.2p1_0207F.1_g088070 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-15 87.0 197 33.5
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-15 85.9 325 23.7
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-14 84.3 178 34.3
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-14 84.3 270 24.8
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.5e-14 84.0 223 26.5
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-14 83.6 150 33.3
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.6e-14 83.2 149 34.9
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-14 82.8 287 27.2
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-14 82.8 141 35.5
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 7.5e-14 81.6 153 33.3
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 7.5e-14 81.6 148 34.5
SHI29540 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-14 81.6 130 35.4
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 2.2e-13 80.1 190 33.2
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.3e-13 78.2 294 26.2
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 1.8e-12 77.0 148 33.1
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.1e-12 76.3 172 31.4
Atru.chr1.2399 Acer truncatum HOM05D000002 ORTHO05D000001 1.6e-11 73.9 132 37.9
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-11 73.2 189 31.2
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-11 72.8 150 32.0
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-11 72.8 150 32.0
Rhsim10G0160500 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.5e-11 72.8 179 30.7
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 4.5e-11 72.4 185 28.1
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.5e-11 72.4 150 31.3
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 5.9e-11 72.0 137 35.8
Cc06_g20010 Coffea canephora HOM05D000002 ORTHO05D000001 7.8e-11 71.6 245 26.9
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-11 71.6 148 33.1
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-10 71.2 158 31.6
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-10 71.2 143 34.3
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-10 70.9 148 33.1
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-10 70.1 181 29.8
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.3e-10 70.1 160 31.9
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-10 70.1 183 28.4
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-10 69.7 158 31.0
Hma1.2p1_0172F.1_g076200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.9e-10 69.7 222 29.7
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-10 69.3 234 27.4
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.0e-10 68.9 132 32.6
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 5.0e-10 68.9 190 30.0
THA.LOC104801935 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.0e-10 68.9 313 24.9
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.6e-10 68.2 171 27.5
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 8.6e-10 68.2 227 24.7
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-09 67.8 148 31.8
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-09 67.4 189 30.7
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.5e-09 67.4 212 27.8
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-09 67.0 150 28.7
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.9e-09 67.0 141 31.2
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-09 66.6 312 22.4
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.5e-09 66.6 142 33.8
Nn7g37542 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.3e-09 66.2 129 33.3
THA.LOC104808376 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.3e-09 66.2 227 23.8
CSS0011881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-09 65.9 134 33.6
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-09 64.7 146 28.8
THA.LOC109116754 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 9.5e-09 64.7 149 32.2
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.2e-08 64.3 150 29.3
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-08 64.3 140 30.7
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.2e-08 64.3 157 29.3
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-08 63.5 148 30.4
Manes.13G068154 Manihot esculenta HOM05D016702 ORTHO05D000001 2.1e-08 63.5 108 38.0
Nitab4.5_0002205g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.1e-08 63.5 138 32.6
VMungo1080G0955 Vigna mungo HOM05D000002 ORTHO05D000001 2.1e-08 63.5 184 30.4
CSS0027920 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-08 63.2 186 29.0
Prupe.4G230800 Prunus persica HOM05D000002 ORTHO05D000001 2.8e-08 63.2 150 34.0
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 3.6e-08 62.8 150 32.0
Ca_27382_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.6e-08 62.8 109 34.9
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 3.6e-08 62.8 188 28.7
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 4.7e-08 62.4 65 47.7
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 6.1e-08 62.0 165 28.5
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 6.1e-08 62.0 65 47.7
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-08 62.0 149 32.2
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 6.1e-08 62.0 102 38.2
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.0e-08 61.6 148 31.1
Psat3g090640 Pisum sativum HOM05D000002 ORTHO05D000001 8.0e-08 61.6 243 24.3
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.0e-08 61.6 184 29.9
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.0e-07 61.2 150 31.3
Peaxi162Scf00237g00226 Petunia axillaris HOM05D000002 ORTHO05D000001 1.0e-07 61.2 140 33.6
CSS0031686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.8 166 28.9
Manes.08G105950 Manihot esculenta HOM05D000002 ORTHO05D000001 1.8e-07 60.5 131 28.2
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.5 146 34.2
Atru.chr5.2226 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-07 60.1 144 31.2
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-07 60.1 153 30.7
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.3e-07 60.1 209 28.7
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-07 59.7 150 26.7
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.0e-07 59.3 97 39.2
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 5.2e-07 58.9 83 38.6
Rhsim12G0142100 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.2e-07 58.9 188 29.3
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-07 58.5 149 28.2
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 6.8e-07 58.5 154 30.5
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 8.9e-07 58.2 148 27.7
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-07 58.2 185 29.2
Ciclev10006756m.g Citrus clementina HOM05D047940 ORTHO05D000001 8.9e-07 58.2 60 48.3
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.9e-07 58.2 122 35.2
Manes.10G109626 Manihot esculenta HOM05D016702 ORTHO05D000001 8.9e-07 58.2 123 32.5
TWI75G0432 Tripterygium wilfordii HOM05D017849 ORTHO05D000001 8.9e-07 58.2 198 25.3
Atru.chr3.2493 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-06 57.8 59 45.8
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-06 57.8 153 31.4
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.5e-06 57.4 147 29.3
Atru.chr1.1128 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-06 57.0 59 40.7
Eucgr.F02352 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.0e-06 57.0 126 31.0
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 56.6 86 37.2
CSS0021451 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 56.6 149 31.5
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 56.6 149 27.5
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 2.6e-06 56.6 109 36.7
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.6e-06 56.6 159 30.8
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 2.6e-06 56.6 191 29.3
Actinidia03788 Actinidia chinensis HOM05D000002 ORTHO05D000001 3.4e-06 56.2 227 23.8
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-06 56.2 152 27.6
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-06 56.2 152 27.6
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.4e-06 55.8 122 36.1
Manes.13G013492 Manihot esculenta HOM05D000002 ORTHO05D000001 4.4e-06 55.8 220 21.8
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-06 55.5 149 28.9
ECA233G4466 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-06 55.5 194 25.3
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 5.7e-06 55.5 180 27.2
CSS0020274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-06 55.1 190 24.7
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 7.5e-06 55.1 153 26.8
Nn1g00402 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.5e-06 55.1 49 46.9
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 7.5e-06 55.1 148 28.4
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 9.8e-06 54.7 153 27.5
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-06 54.7 151 31.8
Manes.05G129701 Manihot esculenta HOM05D016702 ORTHO05D000001 9.8e-06 54.7 114 32.5


User provided reference genes

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