Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 5.0e-268 927.2 462 100.0
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 2.5e-222 775.4 455 83.7
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 8.7e-212 740.3 461 79.8
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 1.3e-210 736.5 458 79.7
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.3e-202 709.9 460 75.4
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 2.8e-202 708.8 454 75.8
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 6.9e-201 704.1 457 75.9
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.6e-200 702.2 461 75.7
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 3.8e-199 698.4 505 71.1
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 9.4e-198 693.7 451 74.3
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 1.6e-197 693.0 459 73.6
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 1.8e-196 689.5 454 74.2
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.2e-194 682.6 454 72.2
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 2.8e-194 682.2 457 72.9
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.7e-194 681.8 454 72.2
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 4.8e-194 681.4 454 72.5
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 6.3e-194 681.0 455 72.1
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 6.3e-194 681.0 452 73.7
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 5.5e-190 667.9 523 65.8
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 5.5e-190 667.9 450 73.3
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 2.1e-189 666.0 462 70.3
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 4.7e-189 664.8 458 71.0
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 8.0e-189 664.1 457 70.7
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 1.8e-188 662.9 472 69.1
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 2.3e-188 662.5 461 71.4
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 2.3e-188 662.5 457 70.7
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 8.8e-188 660.6 459 71.0
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.5e-187 659.8 460 69.3
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.0e-187 659.4 459 71.0
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 9.7e-187 657.1 449 70.2
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 1.7e-186 656.4 451 71.0
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.2e-186 656.0 446 72.6
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 3.7e-186 655.2 461 69.6
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 6.3e-186 654.4 455 70.5
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 8.2e-186 654.1 453 70.0
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 9.1e-185 650.6 461 69.0
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 9.1e-185 650.6 460 68.9
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.6e-184 649.8 461 68.1
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.6e-184 649.8 461 68.1
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 7.7e-184 647.5 449 69.5
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 2.2e-183 646.0 452 70.8
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.5e-182 643.3 459 69.3
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 5.5e-182 641.3 451 70.7
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 1.2e-181 640.2 454 68.7
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 4.7e-181 638.3 460 68.9
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 1.8e-180 636.3 451 69.8
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 6.8e-180 634.4 455 66.6
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.0e-179 632.9 458 67.2
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 2.6e-179 632.5 458 67.7
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 1.3e-178 630.2 453 67.8
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 3.7e-178 628.6 451 69.4
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 2.7e-176 622.5 549 59.6
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 4.5e-176 621.7 448 66.7
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 4.5e-176 621.7 472 64.8
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.5e-174 616.7 425 70.6
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 7.2e-174 614.4 450 66.2
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 4.0e-172 608.6 454 65.4
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 5.2e-172 608.2 452 65.7
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 4.4e-171 605.1 454 65.4
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 4.9e-170 601.7 425 68.7
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 2.4e-169 599.4 455 63.1
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 2.4e-169 599.4 454 64.3
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 2.4e-169 599.4 430 67.2
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 2.7e-168 595.9 459 64.1
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 1.0e-167 594.0 452 65.0
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 1.7e-167 593.2 458 65.1
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 2.3e-167 592.8 458 63.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 2.9e-167 592.4 452 64.6
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 2.9e-167 592.4 452 64.6
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 5.0e-167 591.7 452 65.0
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 8.6e-167 590.9 470 61.5
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.1e-166 590.5 452 64.8
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 5.6e-166 588.2 459 64.1
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 5.6e-166 588.2 459 63.2
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 1.4e-164 583.6 454 62.1
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 6.8e-164 581.3 460 61.5
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 6.8e-164 581.3 435 66.7
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.5e-163 580.1 398 72.4
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.7e-162 576.6 435 69.4
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 2.4e-161 572.8 459 61.4
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 2.4e-161 572.8 459 61.4
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 5.4e-161 571.6 459 61.2
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 5.4e-161 571.6 459 61.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 3.5e-160 568.9 459 61.2
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 3.5e-160 568.9 395 70.4
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.9e-158 563.1 373 72.9
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 7.3e-158 561.2 407 68.3
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 1.5e-155 553.5 470 61.3
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 3.4e-155 552.4 467 60.2
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 2.9e-146 522.7 397 65.7
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 3.5e-144 515.8 394 63.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 3.5e-136 489.2 451 58.1
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 5.6e-134 481.9 470 55.7
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 2.8e-133 479.6 324 71.3
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.5e-131 473.8 334 69.8
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 2.6e-123 446.4 311 69.8
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 8.4e-122 441.4 303 70.6
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 9.0e-116 421.4 400 53.0
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 4.2e-105 386.0 311 61.7
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 8.2e-93 345.1 254 67.7
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 8.2e-93 345.1 254 67.7
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 7.2e-89 332.0 467 42.0
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 3.2e-73 280.0 395 42.5
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.6e-70 270.4 239 60.7
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 5.7e-70 269.2 184 73.4
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 1.7e-69 267.7 213 62.0
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 4.4e-38 163.3 113 69.9
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.9e-28 131.3 96 62.5
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 2.4e-20 104.4 68 72.1
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 2.7e-19 100.9 68 70.6
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.6e-16 91.7 80 56.2
Nitab4.5_0004050g0040 Nicotiana tabacum HOM05D007119 ORTHO05D284832 5.8e-06 56.6 31 77.4


User provided reference genes

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