Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0079F.1_g041380 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 1.1e-71 273.1 132 100.0
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 2.3e-40 169.1 90 94.4
Dinv29532 Davidia involucrata HOM05D005298 ORTHO05D008015 5.0e-35 151.4 90 82.2
CSS0004853 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 1.4e-34 149.8 90 80.0
CSS0017624 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 1.4e-34 149.8 90 80.0
TAR362G0426 Trochodendron aralioides HOM05D005298 ORTHO05D008015 3.6e-33 145.2 89 77.5
GSVIVG01034907001 Vitis vinifera HOM05D005298 ORTHO05D008015 1.8e-32 142.9 90 75.6
Rhsim04G0246500 Rhododendron simsii HOM05D005298 ORTHO05D008015 1.1e-31 140.2 90 75.6
Cfa015712 Carpinus fangiana HOM05D005298 ORTHO05D008015 3.3e-31 138.7 90 75.6
Prupe.1G109100 Prunus persica HOM05D005298 ORTHO05D008015 3.3e-31 138.7 90 74.4
QL06p013696 Quercus lobata HOM05D005298 ORTHO05D008015 7.4e-31 137.5 90 71.1
vmacro07993 Vaccinium macrocarpon HOM05D005298 ORTHO05D008015 7.4e-31 137.5 90 75.6
Actinidia18497 Actinidia chinensis HOM05D005298 ORTHO05D008015 1.3e-30 136.7 90 75.6
Gorai.005G070900 Gossypium raimondii HOM05D005298 ORTHO05D008015 2.2e-30 136.0 90 71.1
Thecc.04G309800 Theobroma cacao HOM05D005298 ORTHO05D008015 2.2e-30 136.0 90 72.2
Lsat_1_v5_gn_6_69380 Lactuca sativa HOM05D005298 ORTHO05D008015 2.8e-30 135.6 90 71.1
MBI18_g28901_MAGBIO Magnolia biondii HOM05D005298 ORTHO05D008015 2.8e-30 135.6 89 69.7
MD16G1139700 Malus domestica HOM05D005298 ORTHO05D008015 2.8e-30 135.6 90 73.3
Atru.chr4.3122 Acer truncatum HOM05D005298 ORTHO05D008015 3.7e-30 135.2 90 73.3
BraA05t22069Z Brassica rapa HOM05D005298 ORTHO05D008015 3.7e-30 135.2 91 69.2
Gohir.D02G063000 Gossypium hirsutum HOM05D005298 ORTHO05D008015 4.8e-30 134.8 90 71.1
arahy.Tifrunner.gnm1.ann1.WSVI3W Arachis hypogaea HOM05D005298 ORTHO05D008015 8.2e-30 134.0 92 68.5
ClCG06G004280 Citrullus lanatus HOM05D005298 ORTHO05D008015 8.2e-30 134.0 91 71.4
Sp3g15510 Schrenkiella parvula HOM05D005298 ORTHO05D008015 8.2e-30 134.0 91 69.2
Aqoxy2G02567 Aquilegia oxysepala HOM05D005298 ORTHO05D008015 1.1e-29 133.7 89 69.7
COL.COLO4_34539 Corchorus olitorius HOM05D005298 ORTHO05D008015 1.1e-29 133.7 90 71.1
ECA233G2380 Erigeron canadensis HOM05D005298 ORTHO05D008015 1.1e-29 133.7 90 73.3
BcaC05g28796 Brassica carinata HOM05D005298 ORTHO05D008015 1.4e-29 133.3 91 68.1
C05p49050 Brassica napus HOM05D005298 ORTHO05D008015 1.4e-29 133.3 91 68.1
BolC5t33645H Brassica oleracea HOM05D005298 ORTHO05D008015 1.4e-29 133.3 91 68.1
Gohir.A02G057201 Gossypium hirsutum HOM05D005298 ORTHO05D008015 1.4e-29 133.3 90 70.0
A05p32420 Brassica napus HOM05D005298 ORTHO05D008015 1.8e-29 132.9 91 68.1
AL3G30390 Arabidopsis lyrata HOM05D005298 ORTHO05D008015 2.4e-29 132.5 90 68.9
AT3G17340 Arabidopsis thaliana HOM05D005298 ORTHO05D008015 2.4e-29 132.5 90 68.9
Ciclev10004217m.g Citrus clementina HOM05D005298 ORTHO05D008015 2.4e-29 132.5 89 69.7
Thhalv10019950m.g Eutrema salsugineum HOM05D005298 ORTHO05D008015 2.4e-29 132.5 91 68.1
CiPaw.01G131300 Carya illinoinensis HOM05D005298 ORTHO05D008015 3.1e-29 132.1 90 70.0
Ca_21388_v3 Cicer arietinum L. HOM05D005298 ORTHO05D008015 5.3e-29 131.3 90 70.0
MD15G1386700 Malus domestica HOM05D005298 ORTHO05D008015 5.3e-29 131.3 90 71.1
CARHR092660 Cardamine hirsuta HOM05D005298 ORTHO05D008015 6.9e-29 131.0 91 67.0
Sabra10G0117500 Salix brachista HOM05D005298 ORTHO05D008015 9.1e-29 130.6 90 68.9
arahy.Tifrunner.gnm1.ann1.68EF5E Arachis hypogaea HOM05D005298 ORTHO05D008015 1.2e-28 130.2 90 67.8
Carub.0003s1705 Capsella rubella HOM05D005298 ORTHO05D008015 1.2e-28 130.2 91 67.0
Lalb_Chr07g0181831 Lupinus albus HOM05D005298 ORTHO05D008015 1.5e-28 129.8 90 68.9
Medtr4g123670 Medicago truncatula HOM05D005298 ORTHO05D008015 1.5e-28 129.8 92 67.4
PGR004G2663 Punica granatum HOM05D005298 ORTHO05D008015 2.6e-28 129.0 91 68.1
DCAR_002539 Daucus carota HOM05D005298 ORTHO05D008015 3.4e-28 128.6 90 68.9
PSO210G1072 Papaver somniferum HOM05D005298 ORTHO05D008015 3.4e-28 128.6 90 66.7
Glyma.17G038500 Glycine max HOM05D005298 ORTHO05D008015 4.5e-28 128.3 90 70.0
Psat0ss1196g0600 Pisum sativum HOM05D005298 ORTHO05D008015 4.5e-28 128.3 90 67.8
TPR.G12648 Trifolium pratense HOM05D005298 ORTHO05D008015 4.5e-28 128.3 90 67.8
Manes.15G003700 Manihot esculenta HOM05D005298 ORTHO05D008015 1.0e-27 127.1 90 68.9
Phvul.003G119400 Phaseolus vulgaris HOM05D005298 ORTHO05D008015 1.3e-27 126.7 90 67.8
VMungo1215G2609 Vigna mungo HOM05D005298 ORTHO05D008015 1.7e-27 126.3 90 68.9
Duzib151G1192 Durio zibethinus HOM05D005298 ORTHO05D008015 2.2e-27 125.9 90 68.9
CANSAT78G1118 Cannabis sativa HOM05D005298 ORTHO05D008015 2.9e-27 125.6 91 68.1
Glyma.07G233500 Glycine max HOM05D005298 ORTHO05D008015 2.9e-27 125.6 90 67.8
Potri.010G152700 Populus trichocarpa HOM05D005298 ORTHO05D008015 2.9e-27 125.6 90 68.9
Sed0008409 Sechium edule HOM05D005298 ORTHO05D008015 2.9e-27 125.6 90 68.9
Oeu020287.1 Olea europaea HOM05D005298 ORTHO05D008015 5.0e-27 124.8 89 65.2
Lj4g0022536 Lotus japonicus HOM05D005298 ORTHO05D008015 6.5e-27 124.4 90 66.7
Sopen01g022220 Solanum pennellii HOM05D005298 ORTHO05D008015 1.4e-26 123.2 90 66.7
CsaV3_6G000130 Cucumis sativus L. HOM05D005298 ORTHO05D008015 1.9e-26 122.9 91 67.0
Solyc01g057520.4 Solanum lycopersicum HOM05D005298 ORTHO05D008015 2.5e-26 122.5 90 66.7
AUR62029998 Chenopodium quinoa HOM05D005298 ORTHO05D008015 3.2e-26 122.1 90 66.7
Lj3A839G57 Lonicera japonica HOM05D005298 ORTHO05D008015 4.2e-26 121.7 79 68.4
HanXRQChr09g0251541 Helianthus annuus HOM05D005298 ORTHO05D008015 5.5e-26 121.3 90 66.7
TWI09G0537 Tripterygium wilfordii HOM05D005298 ORTHO05D008015 5.5e-26 121.3 91 65.9
Aa31LG8G4260 Aethionema arabicum HOM05D005298 ORTHO05D008015 9.4e-26 120.6 91 62.6
FAN17G0175 Fragaria x ananassa HOM05D005298 ORTHO05D008015 9.4e-26 120.6 90 66.7
FvH4_4g21110 Fragaria vesca HOM05D005298 ORTHO05D008015 1.6e-25 119.8 90 66.7
EL10Ac3g06277 Beta vulgaris HOM05D005298 ORTHO05D008015 2.1e-25 119.4 90 64.4
Nitab4.5_0000169g0140 Nicotiana tabacum HOM05D005298 ORTHO05D008015 2.1e-25 119.4 90 66.7
ATR0796G315 Amborella trichopoda HOM05D005298 ORTHO05D008015 2.7e-25 119.0 89 62.9
Haze_00801 Corylus avellana HOM05D005298 ORTHO05D008015 2.7e-25 119.0 77 75.3
Peaxi162Scf00126g10123 Petunia axillaris HOM05D005298 ORTHO05D008015 4.7e-25 118.2 90 66.7
Eucgr.H04107 Eucalyptus grandis HOM05D005298 ORTHO05D008015 7.9e-25 117.5 91 59.3
RcHm_v2.0_Chr4g0426661 Rosa chinensis HOM05D005298 ORTHO05D008015 7.9e-25 117.5 90 66.7
CAN.G14.34 Capsicum annuum HOM05D005298 ORTHO05D008015 3.0e-24 115.5 90 63.3
Ah.07g203800 Amaranthus hybridus HOM05D005298 ORTHO05D008015 1.1e-23 113.6 90 60.0
FAN07G1807 Fragaria x ananassa HOM05D005298 ORTHO05D008015 1.5e-23 113.2 90 64.4
Os11g0695900 Oryza sativa ssp. japonica HOM05D005298 ORTHO05D008015 1.3e-22 110.2 130 46.2
Mapoly0002s0222 Marchantia polymorpha HOM05D005298 ORTHO05D008015 4.8e-22 108.2 90 56.7
Zm00001eb164790 Zea mays HOM05D005298 ORTHO05D008015 6.3e-22 107.8 89 56.2
Nitab4.5_0000992g0090 Nicotiana tabacum HOM05D005298 ORTHO05D008015 1.1e-21 107.1 77 67.5
TPR.G8357 Trifolium pratense HOM05D005298 ORTHO05D008015 9.1e-21 104.0 88 60.2
SEGI_25654 Sequoiadendron giganteum HOM05D005298 ORTHO05D008015 4.5e-20 101.7 89 58.4
Pp3c21_7100 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.4e-18 96.7 90 52.2
Pp3c21_7106 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.4e-18 96.7 90 52.2
Mapoly0011s0083 Marchantia polymorpha HOM05D005298 ORTHO05D008015 1.9e-18 96.3 90 44.4
Cpa.g.sc146.46 Carica papaya HOM05D005298 ORTHO05D008015 4.2e-18 95.1 91 56.0
GSVIVG01017599001 Vitis vinifera HOM05D005298 ORTHO05D008015 2.7e-17 92.4 63 71.4
Pp3c1_32943 Physcomitrium patens HOM05D005298 ORTHO05D008015 4.7e-17 91.7 89 51.7
SMO200G0212 Selaginella moellendorffii HOM05D005298 ORTHO05D008015 2.6e-15 85.9 89 42.7
Pp3c27_6680 Physcomitrium patens HOM05D005298 ORTHO05D008015 3.7e-14 82.0 118 40.7
Nn3g21868 Nelumbo nucifera HOM05D005298 ORTHO05D008015 5.3e-13 78.2 62 59.7
Zm00001eb026980 Zea mays HOM05D005298 ORTHO05D008015 5.3e-13 78.2 62 61.3
Pp3c1_32940 Physcomitrium patens HOM05D005298 ORTHO05D008015 7.7e-12 74.3 64 54.7
FvH4_4g20840 Fragaria vesca HOM05D005298 ORTHO05D008015 1.1e-10 70.5 64 60.9


User provided reference genes

Program Settings