Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0009F.1_g006286 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_0036F.1_g023630 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_0079F.1_g041036 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_0375F.1_g138673 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_0461F.1_g157796 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_0669F.1_g200153 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_1727F.1_g299533 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_1988F.1_g310145 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_2302F.1_g319296 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_2987F.1_g331295 Hydrangea macrophylla HOM05D014087 ORTHO05D012650 6.5e-71 270.8 154 100.0
Hma1.2p1_0036F.1_g023620 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-17 93.2 59 96.6
Hma1.2p1_0079F.1_g041033 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-17 93.2 59 96.6
Hma1.2p1_0461F.1_g157793 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-17 93.2 59 96.6
Hma1.2p1_1974F.1_g309665 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-17 93.2 59 96.6
Hma1.2p1_2302F.1_g319293 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-17 93.2 59 96.6
Hma1.2p1_2987F.1_g331293 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-17 93.2 59 96.6
CSS0014963 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-10 69.7 79 45.6
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-10 67.8 76 52.6
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-09 66.6 73 50.7
CSS0011358 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-09 66.2 79 44.3
CSS0040389 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-09 65.9 79 43.0
HanXRQChr06g0173631 Helianthus annuus HOM05D000002 ORTHO05D000001 5.5e-09 65.1 73 49.3
Sabra15G0030300 Salix brachista HOM05D005418 ORTHO05D012650 9.3e-09 64.3 84 40.5
SHI15917 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-09 64.3 72 45.8
Sopen05g014030 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-08 63.9 71 46.5
CSS0030158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 63.5 79 41.8
SHI05359 Sapria himalayana HOM05D000002 ORTHO05D012650 1.6e-08 63.5 69 44.9
CSS0017625 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-08 63.2 76 50.0
AUR62031847 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.1e-08 63.2 73 49.3
CSS0045881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-08 62.8 71 45.1
RhsimUnG0146100 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.7e-08 62.8 73 43.8
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-08 62.8 72 45.8
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-08 62.4 71 47.9
CSS0048213 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-08 62.4 70 44.3
Hma1.2p1_0432F.1_g151650 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-08 61.6 75 45.3
CSS0027984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-08 61.2 79 43.0
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.9e-08 61.2 63 49.2
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 60.8 82 41.5
AUR62036070 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-07 60.8 72 38.9
ECA238G0426 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-07 60.8 82 42.7
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 82 42.7
ECA238G1149 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 82 42.7
ECA238G1515 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 82 42.7
ECA240G2946 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 82 42.7
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 82 42.7
FvH4_5g12471 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-07 60.5 71 45.1
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-07 60.5 78 44.9
SHI05497 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 60.5 71 43.7
TPR.G23755 Trifolium pratense HOM05D000002 ORTHO05D000001 1.3e-07 60.5 37 70.3
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-07 60.1 72 44.4
Sopen00g013840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.1 35 71.4
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.1 35 71.4
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.1 35 71.4
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.1 35 71.4
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.1 35 71.4
CSS0024117 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 59.7 77 41.6
CSS0027287 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 2.3e-07 59.7 81 42.0
CSS0047919 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 59.7 37 62.2
AUR62040404 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.3e-07 59.7 38 63.2
Hma1.2p1_0432F.1_g151640 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-07 59.7 42 59.5
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.3e-07 59.7 63 47.6
Rhsim12G0120600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-07 59.7 58 51.7
SHI29906 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-07 59.7 68 44.1
SHI49905 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-07 59.7 72 43.1
SHI51724 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-07 59.7 72 43.1
Sopen05g014860 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-07 59.7 36 66.7
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-07 59.3 82 40.2
AUR62026592 Chenopodium quinoa HOM05D000309 ORTHO05D000001 3.0e-07 59.3 38 63.2
VMungo1127G2280 Vigna mungo HOM05D001041 ORTHO05D000846 3.0e-07 59.3 39 64.1
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.9e-07 58.9 62 43.5
Sopen07g019560 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 58.9 71 45.1
AUR62034726 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.1e-07 58.5 72 37.5
ECA233G3173 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-07 58.5 82 41.5
FvH4_3g12332 Fragaria vesca HOM05D000002 ORTHO05D000001 5.1e-07 58.5 67 41.8
FvH4_4g30271 Fragaria vesca HOM05D000002 ORTHO05D000001 5.1e-07 58.5 66 45.5
PSO541G3208 Papaver somniferum HOM05D000002 ORTHO05D000001 5.1e-07 58.5 74 44.6
QL09p034601 Quercus lobata HOM05D000002 ORTHO05D000001 5.1e-07 58.5 62 43.5
Rhsim02G0093400 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.1e-07 58.5 36 66.7
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.1e-07 58.5 36 66.7
RhsimUnG0178000 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.1e-07 58.5 36 66.7
RhsimUnG0182300 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.1e-07 58.5 36 66.7
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-07 58.5 91 41.8
CSS0008000 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.7e-07 58.2 50 54.0
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.7e-07 58.2 36 63.9
SEGI_00135 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 6.7e-07 58.2 88 38.6
Sopen03g020180 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 58.2 38 63.2
Sopen09g024350 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 58.2 71 43.7
AUR62018148 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.7e-07 57.8 72 36.1
Hma1.2p1_0544F.1_g175740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.7e-07 57.8 58 53.4
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.7e-07 57.8 65 47.7
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.7e-07 57.8 65 47.7
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-07 57.8 77 44.2
SHI45012 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-07 57.8 68 47.1
SHI48640 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-07 57.8 68 47.1
SHI51654 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-07 57.8 68 47.1
SEGI_22044 Sequoiadendron giganteum HOM05D000015 ORTHO05D050993 8.7e-07 57.8 88 38.6
SEGI_35325 Sequoiadendron giganteum HOM05D000002 ORTHO05D050993 8.7e-07 57.8 88 38.6
Sopen10g015650 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 57.8 36 63.9
Sopen11g022020 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 57.8 35 65.7
Sopen12g010580 Solanum pennellii HOM05D000014 ORTHO05D000093 8.7e-07 57.8 35 65.7
CSS0021428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 41 58.5
ECA233G2364 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 57 49.1
ECA238G2859 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 38 60.5
ECA247G1119 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 82 40.2
FvH4_4g30901 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-06 57.4 67 40.3
Hma1.2p1_0990F.1_g244900 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-06 57.4 70 42.9
Nn5g26836 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-06 57.4 75 42.7
Rhsim04G0200400 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 54 48.1
RcHm_v2.0_Chr5g0064021 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 73 41.1
SHI52580 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 57.4 35 65.7
SHI53128 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 57.4 35 65.7
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 35 65.7
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 35 65.7
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 35 65.7
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 35 65.7
CSS0012713 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 64 43.8
CSS0023125 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 64 40.6
ECA233G2113 Erigeron canadensis HOM05D001255 ORTHO05D001246 1.5e-06 57.0 49 53.1
FvH4_1g19621 Fragaria vesca HOM05D014087 ORTHO05D012650 1.5e-06 57.0 54 48.1
SHI32857 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.0 81 43.2
SEGI_18981 Sequoiadendron giganteum HOM05D001326 ORTHO05D002471 1.5e-06 57.0 69 47.8
Ah.16g108360 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-06 56.6 39 64.1
CSS0000424 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 75 44.0
ECA236G2735 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 67 47.8
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 82 41.5
HanXRQChr14g0436351 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-06 56.6 63 46.0
Rhsim02G0113200 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-06 56.6 76 39.5
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 56.6 91 41.8
TPR.G33268 Trifolium pratense HOM05D000002 ORTHO05D000001 1.9e-06 56.6 66 47.0
MSTRG.22736 Avicennia marina HOM05D000002 ORTHO05D000001 2.5e-06 56.2 67 43.3
CSS0040283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 41 53.7
AUR62037666 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.5e-06 56.2 78 42.3
ECA240G1585 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 39 56.4
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.5e-06 56.2 43 53.5
SEGI_35443 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 2.5e-06 56.2 70 45.7
Sopen05g027450 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 56.2 90 42.2
Sopen09g024390 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 56.2 37 64.9
CSS0010389 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-06 55.8 41 53.7
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.3e-06 55.8 76 39.5
SEGI_41067 Sequoiadendron giganteum HOM05D033972 ORTHO05D012650 3.3e-06 55.8 57 49.1
Sopen01g022200 Solanum pennellii HOM05D000006 ORTHO05D000001 3.3e-06 55.8 35 60.0
TPR.G23261 Trifolium pratense HOM05D000501 ORTHO05D000376 3.3e-06 55.8 64 48.4
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-06 55.5 36 61.1
CSS0031781 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-06 55.5 64 45.3
HanXRQChr14g0456471 Helianthus annuus HOM05D000103 ORTHO05D000001 4.3e-06 55.5 68 45.6
Hma1.2p1_0160F.1_g071170 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-06 55.5 88 40.9
Hma1.2p1_0542F.1_g175110 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-06 55.5 59 45.8
Rhsim09G0034600 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.3e-06 55.5 74 37.8
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 4.3e-06 55.5 57 40.4
SHI05323 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-06 55.5 35 62.9
AUR62024328 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.6e-06 55.1 72 36.1
AUR62035917 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.6e-06 55.1 70 35.7
Lalb_Chr23g0277681 Lupinus albus HOM05D000002 ORTHO05D000001 5.6e-06 55.1 63 44.4
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-06 54.7 32 75.0
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-06 54.7 64 43.8
AUR62038943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.4e-06 54.7 61 39.3
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 54.7 76 35.5
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 7.4e-06 54.7 71 39.4
Hma1.2p1_0498F.1_g166620 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.4e-06 54.7 42 52.4
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.4e-06 54.7 82 39.0
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 7.4e-06 54.7 62 41.9
SHI19082 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-06 54.7 72 45.8
AUR62009289 Chenopodium quinoa HOM05D000006 ORTHO05D000001 9.6e-06 54.3 70 42.9
ECA233G1773 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 54.3 36 55.6
ECA240G3973 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 54.3 82 36.6
Hma1.2p1_0017F.1_g011950 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.6e-06 54.3 83 39.8
Hma1.2p1_3199F.1_g333880 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.6e-06 54.3 67 38.8
Rhsim01G0047900 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.6e-06 54.3 80 43.8
Rhsim04G0139500 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.6e-06 54.3 42 54.8
SEGI_03128 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.6e-06 54.3 56 46.4
SEGI_16354 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 9.6e-06 54.3 39 59.0
SEGI_30860 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.6e-06 54.3 56 46.4


User provided reference genes

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