Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 1.5e-47 192.6 102 100.0
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 1.4e-24 116.3 101 70.3
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 1.3e-19 99.8 95 65.3
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 2.9e-19 98.6 91 63.7
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 8.6e-19 97.1 90 63.3
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 1.9e-18 95.9 100 60.0
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 2.5e-18 95.5 100 62.0
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 8.0e-17 90.5 103 56.3
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 8.0e-17 90.5 93 53.8
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 3.0e-16 88.6 98 55.1
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 6.8e-16 87.4 102 53.9
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 6.8e-16 87.4 102 53.9
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 6.8e-16 87.4 102 53.9
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 6.8e-16 87.4 91 59.3
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 8.9e-16 87.0 98 55.1
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 1.2e-15 86.7 91 57.1
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 1.2e-15 86.7 63 73.0
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 2.6e-15 85.5 79 57.0
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 3.4e-15 85.1 99 54.5
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 4.4e-15 84.7 99 55.6
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 5.8e-15 84.3 86 57.0
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 7.5e-15 84.0 101 57.4
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 2.9e-14 82.0 94 54.3
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 2.9e-14 82.0 99 51.5
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 4.9e-14 81.3 67 61.2
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 4.9e-14 81.3 96 52.1
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 6.4e-14 80.9 83 61.4
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 1.8e-13 79.3 90 54.4
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 1.8e-13 79.3 93 53.8
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 2.4e-13 79.0 80 56.2
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 2.4e-13 79.0 63 66.7
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 3.2e-13 78.6 90 54.4
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 5.4e-13 77.8 95 52.6
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 7.0e-13 77.4 82 53.7
CARHR026490 Cardamine hirsuta HOM05D007247 ORTHO05D009208 1.6e-12 76.3 64 62.5
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 1.6e-12 76.3 92 53.3
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 1.6e-12 76.3 96 53.1
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 2.7e-12 75.5 105 52.4
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 3.5e-12 75.1 97 48.5
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 3.5e-12 75.1 84 50.0
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 4.6e-12 74.7 91 50.5
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 4.6e-12 74.7 68 57.4
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 4.6e-12 74.7 76 63.2
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 4.6e-12 74.7 102 47.1
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 6.0e-12 74.3 83 50.6
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 6.0e-12 74.3 83 50.6
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 6.0e-12 74.3 83 50.6
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 6.0e-12 74.3 83 50.6
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 6.0e-12 74.3 83 50.6
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 6.0e-12 74.3 100 55.0
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 7.8e-12 73.9 98 48.0
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 1.3e-11 73.2 80 53.8
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 1.3e-11 73.2 80 53.8
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 1.3e-11 73.2 96 51.0
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 1.7e-11 72.8 94 50.0
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 1.7e-11 72.8 82 53.7
BcaB03g12051 Brassica carinata HOM05D007247 ORTHO05D009208 2.3e-11 72.4 80 53.8
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 2.3e-11 72.4 103 49.5
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 2.3e-11 72.4 78 55.1
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 3.0e-11 72.0 80 53.8
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 3.9e-11 71.6 90 50.0
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 5.0e-11 71.2 89 52.8
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 1.1e-10 70.1 58 62.1
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 1.1e-10 70.1 96 45.8
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 1.1e-10 70.1 57 64.9
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 1.9e-10 69.3 53 64.2
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 1.9e-10 69.3 59 61.0
BcaC01g01656 Brassica carinata HOM05D007247 ORTHO05D009208 2.5e-10 68.9 80 52.5
BolC3t19629H Brassica oleracea HOM05D007247 ORTHO05D009208 2.5e-10 68.9 80 52.5
Carub.0001s2551 Capsella rubella HOM05D007247 ORTHO05D009208 2.5e-10 68.9 76 52.6
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 2.5e-10 68.9 80 55.0
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 4.3e-10 68.2 46 71.7
AL1G40330 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 7.3e-10 67.4 75 50.7
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 7.3e-10 67.4 100 47.0
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 9.5e-10 67.0 97 45.4
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 9.5e-10 67.0 52 73.1
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 9.5e-10 67.0 52 73.1
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 9.5e-10 67.0 51 66.7
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 1.2e-09 66.6 72 54.2
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 1.6e-09 66.2 99 47.5
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 2.8e-09 65.5 83 53.0
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 3.6e-09 65.1 89 51.7
unitig_22.g5530 Utricularia gibba HOM05D007247 ORTHO05D009208 3.6e-09 65.1 66 54.5
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 4.7e-09 64.7 88 51.1
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 4.7e-09 64.7 72 51.4
EL10Ac6g13820 Beta vulgaris HOM05D007247 ORTHO05D009208 6.2e-09 64.3 94 47.9
unitig_8.g3935 Utricularia gibba HOM05D007247 ORTHO05D009208 6.2e-09 64.3 69 55.1
AT1G24577 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 8.0e-09 63.9 54 55.6
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 8.0e-09 63.9 76 51.3
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.4e-08 63.2 82 52.4
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 1.4e-08 63.2 89 50.6
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 1.8e-08 62.8 81 49.4
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 1.8e-08 62.8 89 49.4
FAN22G0007 Fragaria x ananassa HOM05D007247 ORTHO05D009208 1.8e-08 62.8 78 46.2
FAN22G1782 Fragaria x ananassa HOM05D007247 ORTHO05D009208 1.8e-08 62.8 78 46.2
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 1.8e-08 62.8 88 46.6
TPR.G17947 Trifolium pratense HOM05D006736 ORTHO05D008459 1.8e-08 62.8 41 68.3
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 2.3e-08 62.4 98 42.9
FvH4_4g25640 Fragaria vesca HOM05D007247 ORTHO05D009208 3.1e-08 62.0 79 45.6
FAN12G2765 Fragaria x ananassa HOM05D007247 ORTHO05D009208 5.2e-08 61.2 79 45.6
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 5.2e-08 61.2 85 47.1
FAN07G0181 Fragaria x ananassa HOM05D007247 ORTHO05D009208 6.8e-08 60.8 82 46.3
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 8.9e-08 60.5 62 61.3
TAR636G3342 Trochodendron aralioides HOM05D007247 ORTHO05D009208 8.9e-08 60.5 68 54.4
FAN17G2797 Fragaria x ananassa HOM05D007247 ORTHO05D009208 4.4e-07 58.2 79 44.3
RcHm_v2.0_Chr4g0433081 Rosa chinensis HOM05D007247 ORTHO05D009208 4.4e-07 58.2 82 45.1
BcaB04g18747 Brassica carinata HOM05D006736 ORTHO05D008459 1.7e-06 56.2 75 41.3
BcaC01g04005 Brassica carinata HOM05D006736 ORTHO05D008459 1.7e-06 56.2 75 41.3
A03p38090 Brassica napus HOM05D006736 ORTHO05D008459 1.7e-06 56.2 75 41.3
C03p46220 Brassica napus HOM05D006736 ORTHO05D008459 1.7e-06 56.2 75 41.3
BolC3t16893H Brassica oleracea HOM05D006736 ORTHO05D008459 1.7e-06 56.2 75 41.3
BraA03t12962Z Brassica rapa HOM05D006736 ORTHO05D008459 1.7e-06 56.2 75 41.3
PSO063G6114 Papaver somniferum HOM05D007247 ORTHO05D009208 1.7e-06 56.2 98 46.9
PSO754G0004 Papaver somniferum HOM05D007247 ORTHO05D009208 2.2e-06 55.8 98 46.9
CARHR087850 Cardamine hirsuta HOM05D006736 ORTHO05D008459 4.9e-06 54.7 76 43.4
Gohir.A13G130900 Gossypium hirsutum HOM05D006736 ORTHO05D008459 4.9e-06 54.7 57 54.4
Lsat_1_v5_gn_9_89061 Lactuca sativa HOM05D007247 ORTHO05D009208 6.4e-06 54.3 40 62.5
BcaB06g25478 Brassica carinata HOM05D006736 ORTHO05D008459 8.3e-06 53.9 71 42.3
LjContig00081g0022969 Lotus japonicus HOM05D006736 ORTHO05D008459 8.3e-06 53.9 63 47.6


User provided reference genes

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