Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0078F.1_g040610 Hydrangea macrophylla HOM05D005069 ORTHO05D006024 4.7e-79 297.7 144 100.0
Dinv29734 Davidia involucrata HOM05D005069 ORTHO05D006024 9.8e-53 210.3 136 75.7
Lj6C680G7 Lonicera japonica HOM05D005069 ORTHO05D006024 5.0e-49 198.0 141 68.8
Actinidia40297 Actinidia chinensis HOM05D005069 ORTHO05D006024 2.0e-45 186.0 140 64.3
Nitab4.5_0006814g0030 Nicotiana tabacum HOM05D005069 ORTHO05D006024 1.1e-43 180.3 140 61.4
Nitab4.5_0000695g0020 Nicotiana tabacum HOM05D005069 ORTHO05D006024 3.2e-43 178.7 141 62.4
Rhsim04G0224900 Rhododendron simsii HOM05D005069 ORTHO05D006024 9.2e-43 177.2 140 63.6
Peaxi162Scf00065g01432 Petunia axillaris HOM05D005069 ORTHO05D006024 5.8e-37 157.9 111 65.8
CAN.G1639.1 Capsicum annuum HOM05D005069 ORTHO05D006024 1.1e-35 153.7 106 67.9
FAN12G2768 Fragaria x ananassa HOM05D005069 ORTHO05D006024 1.4e-35 153.3 128 58.6
FAN07G0695 Fragaria x ananassa HOM05D005069 ORTHO05D006024 1.9e-35 152.9 128 58.6
Solyc01g066510.3 Solanum lycopersicum HOM05D005069 ORTHO05D006024 3.2e-35 152.1 116 60.3
Migut.G00133 Erythranthe guttata HOM05D005069 ORTHO05D006024 5.4e-35 151.4 135 55.6
vmacro08181 Vaccinium macrocarpon HOM05D005069 ORTHO05D006024 2.1e-34 149.4 102 66.7
RcHm_v2.0_Chr4g0423171 Rosa chinensis HOM05D005069 ORTHO05D006024 4.6e-34 148.3 128 56.2
Prupe.1G132400 Prunus persica HOM05D005069 ORTHO05D006024 4.3e-32 141.7 128 51.6
GSVIVG01035118001 Vitis vinifera HOM05D005069 ORTHO05D006024 3.6e-31 138.7 116 58.6
SalBow2G1933 Salvia bowleyana HOM05D005069 ORTHO05D006024 6.2e-31 137.9 106 60.4
Lsat_1_v5_gn_6_96300 Lactuca sativa HOM05D005069 ORTHO05D006024 2.4e-30 136.0 141 49.6
EL10Ac3g06634 Beta vulgaris HOM05D005069 ORTHO05D006024 3.1e-30 135.6 106 57.5
AUR62032020 Chenopodium quinoa HOM05D005069 ORTHO05D006024 3.1e-30 135.6 119 51.3
Sc13g0003280 Simmondsia chinensis HOM05D005069 ORTHO05D006024 1.2e-29 133.7 126 50.8
Ah.00g238040 Amaranthus hybridus HOM05D005069 ORTHO05D006024 3.4e-29 132.1 111 50.5
Haze_01171 Corylus avellana HOM05D005069 ORTHO05D006024 4.4e-29 131.7 124 54.8
Cfa015421 Carpinus fangiana HOM05D005069 ORTHO05D006024 1.7e-28 129.8 143 47.6
CiPaw.02G080300 Carya illinoinensis HOM05D005069 ORTHO05D006024 1.7e-28 129.8 124 53.2
Duzib151G0715 Durio zibethinus HOM05D005069 ORTHO05D006024 3.8e-28 128.6 119 53.8
AUR62018094 Chenopodium quinoa HOM05D005069 ORTHO05D006024 6.4e-28 127.9 106 54.7
Gorai.005G061500 Gossypium raimondii HOM05D005069 ORTHO05D006024 6.4e-28 127.9 118 53.4
QL06p010168 Quercus lobata HOM05D005069 ORTHO05D006024 6.4e-28 127.9 140 47.1
Sabra07G0100800 Salix brachista HOM05D005069 ORTHO05D006024 8.4e-28 127.5 141 49.6
TAR636G0683 Trochodendron aralioides HOM05D005069 ORTHO05D006024 2.4e-27 125.9 110 57.3
Gohir.A02G050600 Gossypium hirsutum HOM05D005069 ORTHO05D006024 3.2e-27 125.6 116 54.3
TWI09G0094 Tripterygium wilfordii HOM05D005069 ORTHO05D006024 3.2e-27 125.6 132 50.8
Sabra07G0101000 Salix brachista HOM05D005069 ORTHO05D006024 4.1e-27 125.2 135 48.1
TPR.G14183 Trifolium pratense HOM05D005069 ORTHO05D006024 4.1e-27 125.2 128 51.6
Atru.chr4.2893 Acer truncatum HOM05D005069 ORTHO05D006024 5.4e-27 124.8 132 46.2
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 1.2e-26 123.6 110 57.3
Cpa.g.sc50.170 Carica papaya HOM05D005069 ORTHO05D006024 1.6e-26 123.2 138 50.0
Hund20526 Selenicereus undatus HOM05D005069 ORTHO05D006024 2.1e-26 122.9 139 44.6
Thecc.04G288100 Theobroma cacao HOM05D005069 ORTHO05D006024 2.1e-26 122.9 138 48.6
Aa31LG11G8390 Aethionema arabicum HOM05D005069 ORTHO05D006024 2.7e-26 122.5 142 46.5
Lalb_Chr15g0086021 Lupinus albus HOM05D005069 ORTHO05D006024 2.7e-26 122.5 138 47.8
Phvul.009G250200 Phaseolus vulgaris HOM05D005069 ORTHO05D006024 2.7e-26 122.5 128 50.0
Potri.007G124900 Populus trichocarpa HOM05D005069 ORTHO05D006024 2.7e-26 122.5 142 50.7
THA.LOC104818914 Tarenaya hassleriana HOM05D005069 ORTHO05D006024 6.0e-26 121.3 142 45.8
Thhalv10005444m.g Eutrema salsugineum HOM05D005069 ORTHO05D006024 1.0e-25 120.6 110 51.8
Manes.04G046000 Manihot esculenta HOM05D005069 ORTHO05D006024 1.0e-25 120.6 144 45.8
Manes.04G046718 Manihot esculenta HOM05D005069 ORTHO05D006024 1.3e-25 120.2 144 46.5
Ca_10630_v3 Cicer arietinum L. HOM05D005069 ORTHO05D006024 1.7e-25 119.8 106 56.6
Ciclev10007186m.g Citrus clementina HOM05D005069 ORTHO05D006024 1.7e-25 119.8 144 45.8
Glyma.09G042600 Glycine max HOM05D005069 ORTHO05D006024 1.7e-25 119.8 140 47.9
Manes.04G045344 Manihot esculenta HOM05D005069 ORTHO05D006024 1.7e-25 119.8 144 45.8
Manes.04G046272 Manihot esculenta HOM05D005069 ORTHO05D006024 1.7e-25 119.8 144 45.8
PGR004G1871 Punica granatum HOM05D005069 ORTHO05D006024 1.7e-25 119.8 132 47.0
A02p37900 Brassica napus HOM05D005069 ORTHO05D006024 3.0e-25 119.0 130 47.7
AL8G22670 Arabidopsis lyrata HOM05D005069 ORTHO05D006024 3.9e-25 118.6 110 51.8
PSO170G2573 Papaver somniferum HOM05D005069 ORTHO05D006024 3.9e-25 118.6 136 49.3
Eucgr.H03956 Eucalyptus grandis HOM05D005069 ORTHO05D006024 8.7e-25 117.5 112 54.5
VMungo1309G0850 Vigna mungo HOM05D005069 ORTHO05D006024 8.7e-25 117.5 140 47.1
BraA02t08774Z Brassica rapa HOM05D005069 ORTHO05D006024 1.1e-24 117.1 130 47.7
Carub.0008s0895 Capsella rubella HOM05D005069 ORTHO05D006024 1.1e-24 117.1 143 44.1
Lj6g0024094 Lotus japonicus HOM05D005069 ORTHO05D006024 1.1e-24 117.1 124 49.2
Manes.04G040225 Manihot esculenta HOM05D005069 ORTHO05D006024 1.1e-24 117.1 143 45.5
Aqoxy2G02916 Aquilegia oxysepala HOM05D005069 ORTHO05D006024 1.9e-24 116.3 110 50.9
AT5G49150 Arabidopsis thaliana HOM05D005069 ORTHO05D006024 1.9e-24 116.3 142 43.7
Nn3g21533 Nelumbo nucifera HOM05D005069 ORTHO05D006024 1.9e-24 116.3 134 48.5
Psat1g155720 Pisum sativum HOM05D005069 ORTHO05D006024 1.9e-24 116.3 106 56.6
Medtr5g020160 Medicago truncatula HOM05D005069 ORTHO05D006024 2.5e-24 115.9 102 57.8
BcaC03g17698 Brassica carinata HOM05D005069 ORTHO05D006024 3.3e-24 115.5 142 45.1
BcaC03g17701 Brassica carinata HOM05D005069 ORTHO05D006024 3.3e-24 115.5 142 45.1
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 3.3e-24 115.5 142 45.1
BolC2t11776H Brassica oleracea HOM05D005069 ORTHO05D006024 3.3e-24 115.5 142 45.1
PSO407G0255 Papaver somniferum HOM05D005069 ORTHO05D006024 3.3e-24 115.5 109 55.0
Medtr2g435850 Medicago truncatula HOM05D005069 ORTHO05D006024 4.3e-24 115.2 102 57.8
Medtr2g436170 Medicago truncatula HOM05D005069 ORTHO05D006024 4.3e-24 115.2 102 57.8
arahy.Tifrunner.gnm1.ann1.9CA2Y1 Arachis hypogaea HOM05D005069 ORTHO05D006024 3.6e-23 112.1 117 50.4
arahy.Tifrunner.gnm1.ann1.I5RJVP Arachis hypogaea HOM05D005069 ORTHO05D006024 1.7e-20 103.2 127 45.7
SGA_v2.0_scaffold67G22603 Striga asiatica HOM05D005069 ORTHO05D006024 6.4e-20 101.3 82 58.5
SHI34756 Sapria himalayana HOM05D005069 ORTHO05D006024 4.6e-18 95.1 111 41.4
DCAR_023295 Daucus carota HOM05D005069 ORTHO05D006024 1.6e-15 86.7 133 38.3
ECA240G4151 Erigeron canadensis HOM05D005069 ORTHO05D006024 6.9e-14 81.3 110 32.7
HanXRQChr03g0089541 Helianthus annuus HOM05D005069 ORTHO05D006024 9.9e-13 77.4 91 42.9
ATR0580G217 Amborella trichopoda HOM05D005069 ORTHO05D006024 3.8e-12 75.5 125 35.2
HPP92_022450 Vanilla planifolia HOM05D005069 ORTHO05D006024 4.9e-12 75.1 123 38.2
TPR.G9115 Trifolium pratense HOM05D005069 ORTHO05D006024 6.4e-12 74.7 68 55.9
CARHR059510 Cardamine hirsuta HOM05D005069 ORTHO05D006024 1.3e-07 60.5 80 47.5
MBI15_g07480_MAGBIO Magnolia biondii HOM05D005069 ORTHO05D006024 9.0e-06 54.3 64 42.2


User provided reference genes

Program Settings