Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0077F.1_g039720 Hydrangea macrophylla HOM05D000207 ORTHO05D228486 4.4e-112 407.9 197 100.0
Hma1.2p1_0203F.1_g086520 Hydrangea macrophylla HOM05D000207 ORTHO05D001482 1.7e-47 193.4 193 56.0
Dinv36063 Davidia involucrata HOM05D000207 ORTHO05D001482 9.3e-38 161.0 197 46.7
Lj4C42T6 Lonicera japonica HOM05D000207 ORTHO05D001482 1.2e-32 144.1 213 40.8
Gohir.A05G195400 Gossypium hirsutum HOM05D000207 ORTHO05D001482 3.8e-31 139.0 196 43.4
TAR376G0484 Trochodendron aralioides HOM05D000207 ORTHO05D001482 5.0e-31 138.7 192 42.7
Ciclev10003473m.g Citrus clementina HOM05D000207 ORTHO05D001482 1.1e-30 137.5 220 40.9
Gohir.D05G198600 Gossypium hirsutum HOM05D000207 ORTHO05D001482 1.9e-30 136.7 196 43.4
Atru.chr13.514 Acer truncatum HOM05D000207 ORTHO05D001482 2.5e-30 136.3 202 43.6
Atru.chr8.2602 Acer truncatum HOM05D000207 ORTHO05D001482 2.5e-30 136.3 202 43.6
Gorai.009G203700 Gossypium raimondii HOM05D000207 ORTHO05D001482 4.2e-30 135.6 196 42.9
Thecc.08G024300 Theobroma cacao HOM05D000207 ORTHO05D001482 1.2e-29 134.0 191 44.0
QL02p007910 Quercus lobata HOM05D000207 ORTHO05D001482 1.4e-28 130.6 192 43.2
CiPaw.16G055500 Carya illinoinensis HOM05D000207 ORTHO05D001482 1.8e-28 130.2 192 41.7
COL.COLO4_26341 Corchorus olitorius HOM05D000207 ORTHO05D001482 3.0e-28 129.4 184 44.0
MBI16_g17454_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D001482 8.8e-28 127.9 187 43.3
Duzib093G1568 Durio zibethinus HOM05D000207 ORTHO05D001482 4.3e-27 125.6 191 41.9
Rhsim06G0034900 Rhododendron simsii HOM05D000207 ORTHO05D001482 5.7e-27 125.2 187 42.8
Cc10_g03070 Coffea canephora HOM05D000207 ORTHO05D001482 9.7e-27 124.4 198 39.9
Cfa018136 Carpinus fangiana HOM05D000207 ORTHO05D001482 1.8e-25 120.2 203 38.4
Nn5g29541 Nelumbo nucifera HOM05D000207 ORTHO05D001482 2.4e-25 119.8 193 40.9
Actinidia15314 Actinidia chinensis HOM05D000207 ORTHO05D001482 4.1e-25 119.0 184 41.3
GSVIVG01009685001 Vitis vinifera HOM05D000207 ORTHO05D001482 1.5e-24 117.1 150 46.7
Manes.05G161800 Manihot esculenta HOM05D000207 ORTHO05D001482 2.6e-24 116.3 185 41.1
Potri.002G263000 Populus trichocarpa HOM05D000207 ORTHO05D001482 4.5e-24 115.5 252 34.9
Haze_17988 Corylus avellana HOM05D000207 ORTHO05D001482 7.7e-24 114.8 203 37.9
CSS0007211 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D001482 2.9e-23 112.8 186 40.3
Aqoxy5G01676 Aquilegia oxysepala HOM05D000207 ORTHO05D001482 6.5e-23 111.7 193 37.3
Aqoxy5G01677 Aquilegia oxysepala HOM05D000207 ORTHO05D001482 6.5e-23 111.7 193 37.3
DCAR_012745 Daucus carota HOM05D000207 ORTHO05D001482 5.5e-22 108.6 187 38.0
CAN.G1126.41 Capsicum annuum HOM05D000207 ORTHO05D001482 6.7e-20 101.7 150 42.7
ECA246G1008 Erigeron canadensis HOM05D000207 ORTHO05D001482 8.8e-20 101.3 179 40.2
Nitab4.5_0000110g0390 Nicotiana tabacum HOM05D000207 ORTHO05D001482 1.5e-19 100.5 172 39.0
Nitab4.5_0003783g0080 Nicotiana tabacum HOM05D000207 ORTHO05D001482 1.5e-19 100.5 172 39.5
Sc15g0006870 Simmondsia chinensis HOM05D000207 ORTHO05D001482 1.5e-19 100.5 202 35.6
Solyc04g080170.3 Solanum lycopersicum HOM05D000207 ORTHO05D001482 2.6e-19 99.8 195 34.9
Sopen04g033760 Solanum pennellii HOM05D000207 ORTHO05D001482 2.6e-19 99.8 195 34.9
Peaxi162Scf00690g00014 Petunia axillaris HOM05D000207 ORTHO05D001482 4.4e-19 99.0 177 39.5
PGSC0003DMG400005145 Solanum tuberosum HOM05D000207 ORTHO05D001482 5.7e-19 98.6 195 34.9
PSO700G0304 Papaver somniferum HOM05D000207 ORTHO05D001482 7.4e-19 98.2 186 34.4
PSO170G6036 Papaver somniferum HOM05D000207 ORTHO05D001482 1.3e-18 97.4 186 34.4
Lsat_1_v5_gn_5_28981 Lactuca sativa HOM05D000207 ORTHO05D001482 2.2e-18 96.7 167 40.1
CDE01G0611 Ceratophyllum demersum HOM05D000207 ORTHO05D001482 1.1e-17 94.4 187 35.3
Migut.C00707 Erythranthe guttata HOM05D000207 ORTHO05D001482 3.1e-17 92.8 184 34.2
SGA_v2.0_scaffold24G10237 Striga asiatica HOM05D000207 ORTHO05D001482 4.1e-17 92.4 182 34.1
MSTRG.1287 Avicennia marina HOM05D000207 ORTHO05D001482 7.0e-17 91.7 183 35.0
SGA_v2.0_scaffold48G18071 Striga asiatica HOM05D000207 ORTHO05D001482 1.5e-16 90.5 183 33.9
THA.LOC104814158 Tarenaya hassleriana HOM05D000207 ORTHO05D001482 1.7e-15 87.0 187 35.8
HanXRQChr05g0151841 Helianthus annuus HOM05D000207 ORTHO05D001482 1.5e-14 84.0 169 35.5
SEGI_12756 Sequoiadendron giganteum HOM05D000207 ORTHO05D001482 1.5e-14 84.0 209 29.7
Carub.0001s3558 Capsella rubella HOM05D000207 ORTHO05D001482 9.4e-14 81.3 194 35.6
Aa31sc145G40 Aethionema arabicum HOM05D000207 ORTHO05D001482 2.7e-13 79.7 171 35.7
Aa31LG5G17200 Aethionema arabicum HOM05D000207 ORTHO05D001482 3.6e-13 79.3 171 35.7
BcaC07g37270 Brassica carinata HOM05D000207 ORTHO05D001482 3.6e-13 79.3 199 34.2
C08p06980 Brassica napus HOM05D000207 ORTHO05D001482 3.6e-13 79.3 199 34.2
BolC8t47540H Brassica oleracea HOM05D000207 ORTHO05D001482 3.6e-13 79.3 199 34.2
ATR0733G050 Amborella trichopoda HOM05D000207 ORTHO05D001482 4.7e-13 79.0 176 32.4
Thhalv10011200m.g Eutrema salsugineum HOM05D000207 ORTHO05D001482 4.7e-13 79.0 172 35.5
Sp1g33960 Schrenkiella parvula HOM05D000207 ORTHO05D001482 4.7e-13 79.0 173 35.3
BraA08t32619Z Brassica rapa HOM05D000207 ORTHO05D001482 6.1e-13 78.6 197 33.5
A08p06190 Brassica napus HOM05D000207 ORTHO05D001482 1.0e-12 77.8 196 34.2
vmacro21628 Vaccinium macrocarpon HOM05D000207 ORTHO05D001482 1.0e-12 77.8 152 36.8
BcaB04g17575 Brassica carinata HOM05D000207 ORTHO05D001482 3.9e-12 75.9 170 35.3
AL1G52800 Arabidopsis lyrata HOM05D000207 ORTHO05D001482 5.2e-12 75.5 170 35.9
CARHR036250 Cardamine hirsuta HOM05D000207 ORTHO05D001482 2.0e-11 73.6 170 33.5
Cpa.g.sc1843.2 Carica papaya HOM05D000207 ORTHO05D001482 2.2e-10 70.1 67 56.7
AT1G45160 Arabidopsis thaliana HOM05D000207 ORTHO05D001482 4.8e-10 68.9 170 34.1
Cpa.g.sc1843.1 Carica papaya HOM05D000207 ORTHO05D001482 5.0e-07 58.9 48 56.2


User provided reference genes

Program Settings