Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 6.3e-160 567.4 286 100.0
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 2.7e-134 482.3 288 86.1
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 1.6e-131 473.0 287 82.9
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 6.6e-125 451.1 287 80.1
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 5.6e-124 448.0 287 80.5
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 6.6e-117 424.5 287 74.2
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 2.5e-116 422.5 287 74.6
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 3.3e-116 422.2 286 75.2
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 9.5e-116 420.6 288 74.3
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 2.1e-115 419.5 288 74.0
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 4.7e-115 418.3 286 74.1
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 4.7e-115 418.3 286 74.5
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 5.2e-114 414.8 287 73.9
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 1.7e-112 409.8 289 72.3
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 2.9e-112 409.1 287 72.8
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 3.7e-112 408.7 291 72.5
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 3.7e-112 408.7 289 72.3
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.4e-111 406.8 288 73.3
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 2.4e-111 406.0 296 71.6
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 2.4e-111 406.0 291 71.8
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 3.2e-111 405.6 286 73.1
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 4.1e-111 405.2 289 72.3
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 3.5e-110 402.1 289 73.0
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 7.8e-110 401.0 287 71.1
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 1.3e-109 400.2 292 71.2
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 1.3e-109 400.2 287 73.5
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 6.6e-109 397.9 256 78.9
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 1.9e-108 396.4 289 71.3
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 2.5e-108 396.0 297 68.7
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 3.3e-108 395.6 256 78.1
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 7.3e-108 394.4 286 71.0
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 9.5e-108 394.0 287 70.7
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 9.5e-108 394.0 253 75.9
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 1.6e-107 393.3 289 68.5
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 2.1e-107 392.9 287 69.3
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 4.0e-106 388.7 256 76.6
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 6.8e-106 387.9 249 77.1
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 1.2e-105 387.1 287 68.6
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 2.0e-105 386.3 287 68.6
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 7.5e-105 384.4 291 69.1
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 1.3e-104 383.6 287 68.3
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 2.2e-104 382.9 286 67.8
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 3.7e-104 382.1 276 68.8
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 4.9e-104 381.7 289 68.9
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 6.4e-104 381.3 298 66.4
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 8.3e-104 380.9 276 68.8
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 1.4e-103 380.2 279 68.5
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 1.9e-103 379.8 254 72.8
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.9e-103 379.8 287 67.2
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 7.1e-103 377.9 293 67.2
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 2.7e-102 375.9 279 69.2
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 3.5e-102 375.6 252 72.2
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 1.0e-101 374.0 287 66.9
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 1.0e-101 374.0 287 67.9
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.3e-101 372.9 286 66.4
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 3.9e-101 372.1 266 69.9
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 3.9e-101 372.1 240 73.8
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 8.6e-101 370.9 274 69.7
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 1.5e-100 370.2 287 65.9
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 6.2e-99 364.8 255 74.1
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.2e-99 364.8 285 65.6
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 6.2e-99 364.8 237 76.4
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 8.1e-99 364.4 287 65.2
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 5.2e-98 361.7 258 70.2
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.8e-98 361.3 285 65.3
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 6.8e-98 361.3 285 67.0
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 4.4e-97 358.6 259 68.7
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 4.4e-97 358.6 259 68.3
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 2.9e-96 355.9 290 64.5
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 3.7e-96 355.5 232 75.0
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 4.1e-95 352.1 286 62.6
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 7.1e-95 351.3 291 63.2
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 1.6e-94 350.1 287 63.4
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 4.6e-94 348.6 287 62.7
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 1.0e-93 347.4 231 73.2
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 1.7e-93 346.7 290 61.7
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.1e-92 344.0 265 66.4
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 3.3e-92 342.4 288 61.5
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 7.3e-92 341.3 287 63.4
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 9.6e-92 340.9 293 60.1
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 3.6e-91 339.0 291 60.5
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 3.6e-91 339.0 291 60.5
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 4.7e-91 338.6 268 65.7
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 1.1e-90 337.4 243 69.1
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 1.4e-90 337.0 266 65.4
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.8e-90 336.7 289 61.6
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 4.0e-90 335.5 248 67.3
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 5.2e-90 335.1 288 62.2
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 2.0e-89 333.2 288 62.5
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 1.3e-88 330.5 310 60.3
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 2.9e-88 329.3 285 63.5
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.9e-87 326.6 291 61.2
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 6.0e-86 321.6 295 60.7
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 1.9e-84 316.6 262 59.9
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 5.6e-84 315.1 272 60.3
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 4.8e-83 312.0 274 62.4
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 1.4e-82 310.5 247 65.6
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.9e-82 308.1 244 66.0
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 4.9e-80 302.0 244 68.0
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.2e-78 297.4 183 78.1
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 1.3e-75 287.3 231 59.7
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.1e-74 284.3 225 60.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 2.6e-73 279.6 175 76.6
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 4.5e-73 278.9 301 52.5
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 3.2e-71 272.7 232 56.9
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 1.3e-69 267.3 254 55.5
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 7.4e-68 261.5 170 72.9
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 4.0e-66 255.8 234 53.4
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 1.5e-60 237.3 240 49.2
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.3e-59 234.2 247 50.2
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 2.1e-59 233.4 272 47.8
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 2.8e-59 233.0 224 53.6
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.7e-59 232.6 265 50.6
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 7.9e-54 214.9 168 67.9
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-53 213.4 237 52.3
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.2e-51 206.8 227 52.9
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.0e-48 198.0 112 84.8
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 9.4e-39 164.9 130 66.2
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 1.1e-36 157.9 223 40.8
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 1.1e-31 141.4 133 54.1
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 1.5e-31 141.0 112 59.8
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 3.0e-29 133.3 188 41.0
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 8.8e-29 131.7 74 83.8
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 2.2e-27 127.1 81 70.4
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 2.2e-27 127.1 81 69.1
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 1.8e-26 124.0 81 69.1
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 1.7e-24 117.5 82 68.3
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 3.5e-17 93.2 168 33.9
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 5.9e-17 92.4 80 61.2
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 1.5e-15 87.8 197 30.5
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 4.2e-15 86.3 105 46.7
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 7.2e-15 85.5 102 50.0
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 7.2e-15 85.5 102 50.0
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 7.2e-15 85.5 102 50.0
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.8e-14 83.6 102 49.0
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.6e-14 83.2 102 49.0
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 4.7e-14 82.8 72 56.9
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 8.0e-14 82.0 65 67.7
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 3.0e-13 80.1 131 42.7
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 2.6e-12 77.0 52 71.2
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 2.8e-11 73.6 58 62.1
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 2.9e-08 63.5 209 28.2


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