Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 4.2e-84 314.7 164 100.0
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 5.0e-45 184.9 171 64.9
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 3.0e-42 175.6 159 63.5
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 6.8e-42 174.5 171 59.6
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 2.2e-40 169.5 124 73.4
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 1.4e-39 166.8 121 74.4
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 7.0e-39 164.5 173 60.1
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 1.2e-38 163.7 102 83.3
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 1.2e-38 163.7 177 58.8
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 4.6e-38 161.8 158 60.1
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 7.8e-38 161.0 173 57.8
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 7.8e-38 161.0 102 81.4
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 7.8e-38 161.0 129 69.8
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 7.8e-38 161.0 101 82.2
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.3e-37 160.2 121 72.7
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 1.3e-37 160.2 121 72.7
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 1.7e-37 159.8 158 57.6
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 2.3e-37 159.5 166 57.8
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 2.3e-37 159.5 159 59.7
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 3.0e-37 159.1 158 58.9
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 6.6e-37 157.9 99 81.8
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 6.6e-37 157.9 158 58.2
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 6.6e-37 157.9 167 58.7
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.5e-36 156.8 166 56.0
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 1.5e-36 156.8 99 81.8
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 2.5e-36 156.0 121 70.2
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 2.5e-36 156.0 167 58.7
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 4.3e-36 155.2 105 78.1
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 4.3e-36 155.2 100 79.0
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 5.6e-36 154.8 99 81.8
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 7.3e-36 154.5 175 56.6
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 7.3e-36 154.5 99 78.8
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 9.5e-36 154.1 158 56.3
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 1.6e-35 153.3 158 58.9
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 2.8e-35 152.5 167 56.9
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 6.2e-35 151.4 98 80.6
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 6.2e-35 151.4 103 75.7
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 8.0e-35 151.0 159 56.6
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 8.0e-35 151.0 98 79.6
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.1e-34 150.6 172 56.4
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 1.1e-34 150.6 98 80.6
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 1.4e-34 150.2 168 55.4
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 1.4e-34 150.2 163 56.4
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 2.3e-34 149.4 101 76.2
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 4.0e-34 148.7 179 56.4
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 5.2e-34 148.3 100 78.0
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 6.8e-34 147.9 87 83.9
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 6.8e-34 147.9 161 52.2
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 1.2e-33 147.1 96 78.1
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 1.2e-33 147.1 113 67.3
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 1.2e-33 147.1 101 74.3
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.5e-33 146.7 101 76.2
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.5e-33 146.7 101 76.2
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 2.0e-33 146.4 97 78.4
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 2.0e-33 146.4 179 50.3
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 2.0e-33 146.4 104 73.1
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 2.6e-33 146.0 162 56.2
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 2.6e-33 146.0 101 76.2
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 4.4e-33 145.2 100 76.0
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 4.4e-33 145.2 96 77.1
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 5.8e-33 144.8 100 76.0
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 9.8e-33 144.1 97 76.3
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 9.8e-33 144.1 97 76.3
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 1.3e-32 143.7 96 77.1
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.3e-32 143.7 96 77.1
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 1.3e-32 143.7 96 77.1
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 1.3e-32 143.7 89 79.8
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 1.3e-32 143.7 96 77.1
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.3e-32 143.7 96 77.1
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 1.3e-32 143.7 96 77.1
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 2.2e-32 142.9 96 76.0
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 2.2e-32 142.9 164 53.7
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 2.2e-32 142.9 159 56.0
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 2.2e-32 142.9 185 51.4
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 2.9e-32 142.5 89 79.8
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 2.9e-32 142.5 165 54.5
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 2.9e-32 142.5 166 53.6
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 3.7e-32 142.1 96 76.0
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 3.7e-32 142.1 160 53.8
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 4.9e-32 141.7 89 78.7
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 4.9e-32 141.7 176 52.8
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 4.9e-32 141.7 96 75.0
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 6.4e-32 141.4 165 55.2
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 6.4e-32 141.4 89 78.7
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 8.3e-32 141.0 98 74.5
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 2.4e-31 139.4 96 75.0
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 2.4e-31 139.4 168 54.2
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 4.1e-31 138.7 163 50.9
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 4.1e-31 138.7 164 50.6
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 5.4e-31 138.3 93 76.3
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 7.0e-31 137.9 92 76.1
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.2e-30 137.1 78 88.5
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 6.0e-30 134.8 87 77.0
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 5.0e-29 131.7 177 51.4
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 8.6e-29 131.0 155 52.9
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 1.5e-28 130.2 77 84.4
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 3.3e-28 129.0 103 66.0
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 4.3e-28 128.6 99 67.7
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 4.7e-27 125.2 124 56.5
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 4.7e-27 125.2 86 73.3
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.1e-26 124.0 80 80.0
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.1e-26 124.0 97 68.0
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 5.2e-26 121.7 74 82.4
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 4.4e-25 118.6 86 72.1
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 2.4e-23 112.8 85 65.9
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 5.4e-23 111.7 102 63.7
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 7.8e-22 107.8 117 59.0
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 5.1e-21 105.1 83 65.1
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 4.7e-19 98.6 82 56.1
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 7.6e-17 91.3 105 48.6
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 2.9e-16 89.4 83 48.2
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 7.1e-15 84.7 49 81.6
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.2e-14 84.0 179 35.8
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.2e-14 84.0 179 35.8
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 1.2e-14 84.0 48 85.4
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 5.1e-13 78.6 118 42.4
CSS0047871 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 2.6e-09 66.2 107 50.5
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 3.4e-09 65.9 50 70.0
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.3e-08 63.9 44 75.0
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 4.2e-07 58.9 43 65.1
Actinidia24513 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.1e-06 56.6 93 44.1
MELO3C002161.2 Cucumis melo HOM05D002854 ORTHO05D003051 6.0e-06 55.1 76 42.1
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 7.8e-06 54.7 38 73.7
Migut.D02063 Erythranthe guttata HOM05D002854 ORTHO05D003051 7.8e-06 54.7 67 41.8
Pp3c5_25080 Physcomitrium patens HOM05D002854 ORTHO05D003051 7.8e-06 54.7 100 37.0


User provided reference genes

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