Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0073F.1_g038460 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 6.4e-26 119.8 53 100.0
Hma1.2p1_0073F.1_g038450 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 9.3e-25 115.9 51 100.0
Dinv06652 Davidia involucrata HOM05D000189 ORTHO05D007859 6.9e-20 99.8 51 86.3
CSS0023610 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007859 7.6e-19 96.3 51 82.4
Oeu042314.1 Olea europaea HOM05D000189 ORTHO05D007859 2.2e-18 94.7 54 79.6
Phvul.009G151700 Phaseolus vulgaris HOM05D000189 ORTHO05D007859 2.9e-18 94.4 51 80.4
Actinidia06600 Actinidia chinensis HOM05D000189 ORTHO05D007859 4.9e-18 93.6 51 80.4
CiPaw.04G179600 Carya illinoinensis HOM05D000189 ORTHO05D007859 4.9e-18 93.6 53 77.4
Medtr3g097060 Medicago truncatula HOM05D000189 ORTHO05D007859 8.4e-18 92.8 51 76.5
Nn5g28246 Nelumbo nucifera HOM05D000189 ORTHO05D007859 8.4e-18 92.8 53 79.2
Psat5g058320 Pisum sativum HOM05D000189 ORTHO05D007859 8.4e-18 92.8 51 78.4
TPR.G7871 Trifolium pratense HOM05D000189 ORTHO05D007859 8.4e-18 92.8 51 76.5
TAR628G1698 Trochodendron aralioides HOM05D000189 ORTHO05D007859 8.4e-18 92.8 51 82.4
Atru.chr4.1118 Acer truncatum HOM05D000189 ORTHO05D007859 1.4e-17 92.0 51 80.4
Rhsim10G0130500 Rhododendron simsii HOM05D000189 ORTHO05D007859 1.4e-17 92.0 51 78.4
GSVIVG01022385001 Vitis vinifera HOM05D000189 ORTHO05D007859 1.4e-17 92.0 53 77.4
Glyma.04G206900 Glycine max HOM05D000189 ORTHO05D007859 1.9e-17 91.7 51 78.4
Cpa.g.sc37.52 Carica papaya HOM05D000189 ORTHO05D007859 4.2e-17 90.5 55 76.4
AUR62000563 Chenopodium quinoa HOM05D000189 ORTHO05D007859 4.2e-17 90.5 53 73.6
Sc09g0002050 Simmondsia chinensis HOM05D000189 ORTHO05D007859 4.2e-17 90.5 53 77.4
arahy.Tifrunner.gnm1.ann1.50NT7J Arachis hypogaea HOM05D000189 ORTHO05D007859 5.4e-17 90.1 51 76.5
arahy.Tifrunner.gnm1.ann1.682KPN Arachis hypogaea HOM05D000189 ORTHO05D007859 5.4e-17 90.1 51 76.5
Aqoxy5G02356 Aquilegia oxysepala HOM05D000189 ORTHO05D007859 7.1e-17 89.7 51 78.4
Ca_17006_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007859 7.1e-17 89.7 51 76.5
Prupe.4G282400 Prunus persica HOM05D000189 ORTHO05D007859 7.1e-17 89.7 55 76.4
Thecc.01G143200 Theobroma cacao HOM05D000189 ORTHO05D007859 7.1e-17 89.7 55 72.7
AUR62006916 Chenopodium quinoa HOM05D000189 ORTHO05D007859 9.3e-17 89.4 53 71.7
Haze_25388 Corylus avellana HOM05D000189 ORTHO05D007859 9.3e-17 89.4 50 78.0
DCAR_019974 Daucus carota HOM05D000189 ORTHO05D007859 9.3e-17 89.4 53 73.6
Lalb_Chr08g0237931 Lupinus albus HOM05D000189 ORTHO05D007859 9.3e-17 89.4 50 78.0
ClCG04G001170 Citrullus lanatus HOM05D000189 ORTHO05D007859 1.2e-16 89.0 53 75.5
COL.COLO4_12122 Corchorus olitorius HOM05D000189 ORTHO05D007859 1.2e-16 89.0 53 75.5
Gohir.A11G224808 Gossypium hirsutum HOM05D000189 ORTHO05D007859 1.2e-16 89.0 53 73.6
Gohir.D11G229200 Gossypium hirsutum HOM05D000189 ORTHO05D007859 1.2e-16 89.0 53 73.6
Gorai.003G068400 Gossypium raimondii HOM05D000189 ORTHO05D007859 1.2e-16 89.0 53 73.6
VMungo1309G2054 Vigna mungo HOM05D014460 ORTHO05D007859 1.2e-16 89.0 51 74.5
ECA248G3490 Erigeron canadensis HOM05D000552 ORTHO05D007859 1.6e-16 88.6 51 72.5
TWI79G0061 Tripterygium wilfordii HOM05D000189 ORTHO05D007859 1.6e-16 88.6 48 81.2
Lj1g0005687 Lotus japonicus HOM05D000189 ORTHO05D007859 2.1e-16 88.2 51 78.4
EL10Ac4g09653 Beta vulgaris HOM05D000189 ORTHO05D007859 2.7e-16 87.8 53 71.7
Cc00_g14750 Coffea canephora HOM05D000189 ORTHO05D007859 2.7e-16 87.8 53 75.5
HanXRQChr01g0019121 Helianthus annuus HOM05D000189 ORTHO05D007859 2.7e-16 87.8 53 71.7
MD00G1127500 Malus domestica HOM05D000189 ORTHO05D007859 2.7e-16 87.8 55 76.4
Ah.02g117830 Amaranthus hybridus HOM05D000189 ORTHO05D007859 3.5e-16 87.4 53 71.7
Lsat_1_v5_gn_1_80940 Lactuca sativa HOM05D000189 ORTHO05D007859 3.5e-16 87.4 53 71.7
Peaxi162Scf00925g00013 Petunia axillaris HOM05D000189 ORTHO05D007859 3.5e-16 87.4 53 73.6
Sed0009877 Sechium edule HOM05D000189 ORTHO05D007859 3.5e-16 87.4 53 71.7
FvH4_1g25640 Fragaria vesca HOM05D000189 ORTHO05D007859 6.0e-16 86.7 53 77.4
FAN19G0214 Fragaria x ananassa HOM05D000189 ORTHO05D007859 6.0e-16 86.7 53 77.4
FAN28G0421 Fragaria x ananassa HOM05D000189 ORTHO05D007859 6.0e-16 86.7 53 77.4
QL10p039723 Quercus lobata HOM05D000189 ORTHO05D007859 6.0e-16 86.7 52 75.0
SalBow7G4190 Salvia bowleyana HOM05D000189 ORTHO05D007859 6.0e-16 86.7 53 73.6
Manes.17G018825 Manihot esculenta HOM05D000189 ORTHO05D007859 1.0e-15 85.9 53 77.4
RcHm_v2.0_Chr2g0123961 Rosa chinensis HOM05D000189 ORTHO05D007859 1.0e-15 85.9 53 75.5
Sopen05g034990 Solanum pennellii HOM05D000189 ORTHO05D007859 1.3e-15 85.5 53 73.6
unitig_60.g25691 Utricularia gibba HOM05D000189 ORTHO05D007859 1.3e-15 85.5 53 73.6
Migut.L00266 Erythranthe guttata HOM05D000189 ORTHO05D007859 1.8e-15 85.1 55 69.1
Migut.L00584 Erythranthe guttata HOM05D000189 ORTHO05D007859 1.8e-15 85.1 55 69.1
Sp6g34160 Schrenkiella parvula HOM05D000189 ORTHO05D007859 1.8e-15 85.1 51 70.6
AT5G08710 Arabidopsis thaliana HOM05D000189 ORTHO05D007859 2.3e-15 84.7 51 70.6
SGA_v2.0_scaffold244G44343 Striga asiatica HOM05D000189 ORTHO05D007859 2.3e-15 84.7 53 67.9
Carub.0006s0768 Capsella rubella HOM05D000189 ORTHO05D007859 3.0e-15 84.3 51 70.6
AL6G19440 Arabidopsis lyrata HOM05D000189 ORTHO05D007859 5.1e-15 83.6 51 70.6
BraA02t04966Z Brassica rapa HOM05D000189 ORTHO05D007859 5.1e-15 83.6 51 68.6
Potri.005G071000 Populus trichocarpa HOM05D000189 ORTHO05D007859 5.1e-15 83.6 53 69.8
Sabra05G0058100 Salix brachista HOM05D000189 ORTHO05D007859 5.1e-15 83.6 53 69.8
CARHR204300 Cardamine hirsuta HOM05D000189 ORTHO05D007859 6.7e-15 83.2 51 70.6
Aa31LG3G17850 Aethionema arabicum HOM05D000189 ORTHO05D007859 8.7e-15 82.8 52 63.5
FAN26G1447 Fragaria x ananassa HOM05D000189 ORTHO05D007859 1.1e-14 82.4 53 73.6
Thhalv10013591m.g Eutrema salsugineum HOM05D000189 ORTHO05D007859 1.5e-14 82.0 51 68.6
BcaB05g21570 Brassica carinata HOM05D000189 ORTHO05D007859 3.3e-14 80.9 51 64.7
Eucgr.I00040 Eucalyptus grandis HOM05D000189 ORTHO05D007859 5.6e-14 80.1 54 70.4
CAN.G1464.5 Capsicum annuum HOM05D000189 ORTHO05D007859 7.4e-14 79.7 51 72.5
BcaC03g13240 Brassica carinata HOM05D000189 ORTHO05D007859 1.6e-13 78.6 52 67.3
C02p03720 Brassica napus HOM05D000189 ORTHO05D007859 1.6e-13 78.6 52 67.3
BolC2t06332H Brassica oleracea HOM05D000189 ORTHO05D007859 1.6e-13 78.6 52 67.3
PSO210G6791 Papaver somniferum HOM05D000189 ORTHO05D007859 1.6e-13 78.6 55 65.5
THA.LOC104800276 Tarenaya hassleriana HOM05D000189 ORTHO05D007859 2.1e-13 78.2 51 64.7
ATR0709G034 Amborella trichopoda HOM05D000189 ORTHO05D007859 2.8e-13 77.8 50 70.0
MBI03_g11131_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007859 3.1e-12 74.3 53 66.0
PGR119G1265 Punica granatum HOM05D000189 ORTHO05D007859 2.6e-11 71.2 64 59.4
SEGI_34887 Sequoiadendron giganteum HOM05D000189 ORTHO05D007859 5.8e-11 70.1 51 62.7
Zm00001eb197640 Zea mays HOM05D000189 ORTHO05D007859 7.6e-11 69.7 54 59.3
Os11g0545800 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007859 2.2e-10 68.2 61 52.5
BraA05t20873Z Brassica rapa HOM05D000189 ORTHO05D007859 3.2e-09 64.3 46 58.7
SMO144G0111 Selaginella moellendorffii HOM05D000189 ORTHO05D007859 7.1e-09 63.2 51 52.9
Pp3c14_25730 Physcomitrium patens HOM05D000189 ORTHO05D007859 2.1e-08 61.6 50 52.0
A05p19680 Brassica napus HOM05D000189 ORTHO05D007859 2.7e-08 61.2 46 56.5
AagrBONN_evm.TU.Sc2ySwM_344.533 Anthoceros agrestis HOM05D000189 ORTHO05D007859 4.6e-08 60.5 50 56.0
Mapoly0001s0080 Marchantia polymorpha HOM05D000189 ORTHO05D007859 8.7e-07 56.2 56 46.4
Migut.L00875 Erythranthe guttata HOM05D000189 ORTHO05D007859 9.6e-06 52.8 39 61.5


User provided reference genes

Program Settings