Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.0e-125 451.1 218 100.0
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 4.7e-91 338.2 161 99.4
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 5.1e-61 238.4 177 67.2
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 4.3e-60 235.3 167 70.7
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 7.4e-60 234.6 165 67.3
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 8.1e-59 231.1 170 67.6
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.3e-56 223.8 167 67.7
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 8.4e-56 221.1 167 65.9
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 4.6e-54 215.3 167 64.1
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 6.0e-54 214.9 165 62.4
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 7.9e-54 214.5 165 61.8
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.0e-53 214.2 179 60.9
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 1.0e-53 214.2 168 61.3
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.8e-53 213.4 168 61.3
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 3.9e-53 212.2 181 56.9
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 3.9e-53 212.2 178 61.2
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 8.7e-53 211.1 175 61.7
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 1.9e-52 209.9 165 62.4
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 1.9e-52 209.9 171 58.5
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.9e-52 209.9 178 60.7
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.5e-52 209.5 181 57.5
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 3.3e-52 209.1 175 61.1
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 1.6e-51 206.8 165 60.0
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 2.1e-51 206.5 189 55.6
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 6.2e-51 204.9 162 63.6
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.8e-50 203.4 165 58.8
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 3.1e-50 202.6 169 59.8
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 3.1e-50 202.6 175 59.4
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 5.3e-50 201.8 181 55.8
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 6.9e-50 201.4 175 59.4
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 9.0e-50 201.1 175 60.0
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.2e-49 200.7 163 61.3
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.2e-49 200.7 165 59.4
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 1.5e-49 200.3 175 60.0
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 4.5e-49 198.7 167 62.9
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 4.5e-49 198.7 181 58.0
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 5.8e-49 198.4 167 57.5
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 7.6e-49 198.0 175 56.6
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 7.6e-49 198.0 165 58.8
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 7.6e-49 198.0 175 55.4
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.0e-48 197.6 164 59.8
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-48 197.2 163 59.5
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 1.3e-48 197.2 171 58.5
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 1.7e-48 196.8 163 59.5
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 2.2e-48 196.4 191 51.8
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 2.2e-48 196.4 165 57.6
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 2.9e-48 196.1 161 62.1
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 2.9e-48 196.1 161 62.7
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 3.8e-48 195.7 175 57.7
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.9e-48 195.3 163 59.5
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 6.5e-48 194.9 163 58.9
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 1.1e-47 194.1 161 58.4
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 2.5e-47 193.0 177 55.4
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 3.2e-47 192.6 175 56.6
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.2e-47 192.6 163 60.1
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 5.5e-47 191.8 171 53.8
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 5.5e-47 191.8 171 53.8
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.5e-47 191.8 163 60.1
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.2e-46 190.7 165 60.6
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.2e-46 190.7 167 60.5
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 3.5e-46 189.1 161 59.6
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 7.9e-46 188.0 168 53.6
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 3.0e-45 186.0 178 53.4
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 3.9e-45 185.7 171 53.8
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 8.7e-45 184.5 172 57.0
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 1.5e-44 183.7 177 53.1
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 3.3e-44 182.6 168 56.5
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 5.7e-44 181.8 165 58.8
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 7.4e-44 181.4 172 57.0
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 9.6e-44 181.0 113 76.1
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 4.8e-43 178.7 182 52.2
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 8.2e-43 177.9 163 58.3
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.4e-42 176.4 164 56.7
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 3.1e-42 176.0 165 53.9
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 4.1e-42 175.6 131 61.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.6e-41 172.9 128 66.4
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 4.5e-41 172.2 205 49.3
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 7.6e-41 171.4 163 54.0
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 1.3e-40 170.6 121 69.4
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 2.2e-40 169.9 161 55.3
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.4e-39 167.2 183 48.1
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 2.5e-39 166.4 174 50.6
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.6e-38 163.7 174 46.0
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 4.6e-38 162.2 159 47.8
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.3e-37 159.8 161 52.8
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 2.3e-37 159.8 161 54.0
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 5.1e-37 158.7 130 60.0
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 1.5e-36 157.1 182 47.8
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 1.9e-36 156.8 252 39.3
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 4.3e-36 155.6 171 49.7
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 4.3e-36 155.6 171 49.7
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 5.7e-36 155.2 167 52.1
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 4.5e-33 145.6 174 46.6
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 3.2e-31 139.4 127 53.5
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 7.7e-25 118.2 181 40.9
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 1.7e-24 117.1 234 34.6
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 5.0e-24 115.5 178 34.8
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 4.2e-23 112.5 171 35.7
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 3.7e-19 99.4 204 29.4
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 7.7e-17 91.7 100 43.0
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 3.6e-14 82.8 120 42.5
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 1.1e-10 71.2 108 32.4
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 2.4e-10 70.1 181 26.5
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 2.2e-08 63.5 43 62.8
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 2.9e-08 63.2 49 59.2
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 8.5e-08 61.6 43 60.5
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 4.2e-07 59.3 43 60.5
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 5.5e-07 58.9 35 68.6
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 2.1e-06 57.0 46 54.3
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 2.7e-06 56.6 43 58.1


User provided reference genes

Program Settings