Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 4.9e-137 491.1 243 100.0
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 3.3e-133 478.4 265 91.7
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 9.9e-98 360.5 268 72.0
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 9.9e-98 360.5 257 73.5
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 2.7e-95 352.4 248 71.4
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 3.5e-95 352.1 269 70.6
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.3e-94 350.1 274 69.0
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.3e-94 350.1 269 69.9
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.7e-94 349.7 274 68.6
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 7.3e-93 344.4 288 67.4
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 3.1e-91 339.0 253 69.2
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 4.0e-91 338.6 286 65.4
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 3.4e-90 335.5 251 70.1
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 9.9e-90 334.0 255 68.6
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.8e-89 332.0 272 65.8
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.1e-88 330.5 262 69.1
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 5.4e-88 328.2 266 65.4
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 9.3e-88 327.4 217 76.5
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 2.1e-87 326.2 303 59.4
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 5.1e-86 321.6 263 68.4
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.1e-85 320.5 282 62.4
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.9e-85 319.7 276 64.1
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 2.5e-85 319.3 277 63.2
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 3.3e-85 318.9 271 63.5
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.3e-85 318.9 274 63.9
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 7.4e-85 317.8 302 58.3
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 1.6e-84 316.6 322 57.1
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.6e-84 316.6 357 54.6
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 8.1e-84 314.3 275 61.8
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 8.1e-84 314.3 274 60.9
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.1e-83 313.9 282 60.6
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 3.1e-83 312.4 280 62.9
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 4.0e-83 312.0 274 62.0
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 5.3e-83 311.6 272 62.5
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 2.0e-82 309.7 271 60.1
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 2.6e-82 309.3 271 62.4
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 3.4e-82 308.9 275 60.7
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 4.5e-82 308.5 271 61.3
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 4.5e-82 308.5 273 62.6
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 7.6e-82 307.8 298 58.7
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 9.9e-82 307.4 276 59.8
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 9.9e-82 307.4 272 61.8
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 1.7e-81 306.6 271 63.1
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 2.9e-81 305.8 276 60.5
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 3.8e-81 305.4 298 58.4
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 3.8e-81 305.4 284 61.6
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 8.4e-81 304.3 263 62.0
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 1.1e-80 303.9 226 68.6
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 1.4e-80 303.5 273 59.3
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.5e-80 302.8 276 58.7
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 3.2e-80 302.4 279 61.6
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 9.3e-80 300.8 279 61.6
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 9.3e-80 300.8 273 58.2
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.6e-79 300.1 316 56.3
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 2.7e-79 299.3 274 59.1
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.5e-79 298.9 276 58.7
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.0e-78 297.4 265 58.9
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.0e-78 297.4 265 58.9
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 1.0e-78 297.4 274 58.4
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.3e-78 297.0 265 58.9
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 2.3e-78 296.2 259 62.5
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 5.1e-78 295.0 274 58.8
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 8.7e-78 294.3 252 61.1
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 8.7e-78 294.3 267 59.6
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.1e-77 293.9 180 77.8
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 1.9e-77 293.1 198 74.7
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 1.9e-77 293.1 223 68.6
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 3.3e-77 292.4 273 57.5
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 7.4e-77 291.2 275 58.2
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 9.6e-77 290.8 275 58.5
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.7e-76 288.9 217 66.4
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 4.8e-76 288.5 238 63.9
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 4.8e-76 288.5 186 76.3
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.4e-75 287.0 335 51.9
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.4e-75 286.2 188 75.0
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.3e-75 285.0 272 57.4
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 6.9e-75 284.6 272 57.7
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 1.2e-74 283.9 264 58.3
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 4.5e-74 282.0 233 61.4
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 1.3e-73 280.4 267 56.6
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 1.7e-73 280.0 278 56.1
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.1e-72 277.3 194 73.7
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.1e-72 277.3 265 56.6
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 7.1e-72 274.6 274 56.9
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 2.7e-71 272.7 184 68.5
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 6.7e-70 268.1 232 58.6
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 3.3e-69 265.8 225 62.7
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.1e-67 260.8 269 58.0
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 5.3e-67 258.5 191 66.0
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 5.9e-66 255.0 225 59.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.0e-62 244.2 192 66.7
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 2.3e-62 243.0 255 52.5
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 2.0e-61 240.0 192 65.6
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 7.4e-61 238.0 194 63.9
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.1e-59 234.2 136 77.9
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.5e-58 230.3 261 52.5
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 8.5e-57 224.6 179 57.5
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.9e-56 223.4 186 57.0
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.5e-56 223.0 238 52.5
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 4.5e-50 202.2 192 51.0
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 1.7e-49 200.3 170 65.3
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 7.4e-45 184.9 190 56.8
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 4.8e-44 182.2 139 68.3
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 3.1e-43 179.5 153 49.7
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 5.9e-42 175.3 138 57.2
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.7e-41 173.7 168 47.6
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.9e-40 170.2 137 58.4
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 2.7e-31 139.8 186 39.2
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.4e-27 127.5 220 40.0
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.5e-26 122.5 110 60.9
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 2.0e-21 107.1 56 82.1
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.1e-19 101.3 59 72.9
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 7.0e-19 98.6 90 55.6
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 2.0e-18 97.1 59 74.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 3.5e-18 96.3 87 55.2
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 3.6e-15 86.3 249 34.1
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.2e-12 77.0 79 55.7
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 2.9e-12 76.6 82 46.3


User provided reference genes

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