Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0067F.1_g037110 Hydrangea macrophylla HOM05D032709 ORTHO05D228055 3.9e-50 201.1 95 100.0
Hma1.2p1_1137F.1_g260755 Hydrangea macrophylla HOM05D032709 ORTHO05D228397 3.9e-50 201.1 95 100.0
Hma1.2p1_0187F.1_g082220 Hydrangea macrophylla HOM05D032709 ORTHO05D228644 5.1e-42 174.1 95 88.4
Hma1.2p1_0430F.1_g151220 Hydrangea macrophylla HOM05D000566 ORTHO05D004798 1.4e-23 112.8 75 74.7
Hma1.2p1_1621F.1_g294040 Hydrangea macrophylla HOM05D000566 ORTHO05D004798 1.3e-13 79.7 85 55.3
Dinv30423 Davidia involucrata HOM05D000566 ORTHO05D004798 2.9e-13 78.6 84 51.2
CSS0004558 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D004798 5.5e-12 74.3 79 46.8
CSS0045532 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D004798 5.5e-12 74.3 79 46.8
ClCG09G000280 Citrullus lanatus HOM05D000566 ORTHO05D004798 2.3e-10 68.9 82 46.3
MELO3C024431.2 Cucumis melo HOM05D000566 ORTHO05D004798 4.0e-10 68.2 80 45.0
Dinv37962 Davidia involucrata HOM05D000566 ORTHO05D004798 8.8e-10 67.0 81 44.4
Cfa003628 Carpinus fangiana HOM05D000566 ORTHO05D004798 4.4e-09 64.7 84 42.9
Actinidia21725 Actinidia chinensis HOM05D000566 ORTHO05D004798 9.8e-09 63.5 64 48.4
Potri.003G047200 Populus trichocarpa HOM05D000566 ORTHO05D004798 1.3e-08 63.2 84 41.7
Sabra03G0019300 Salix brachista HOM05D000566 ORTHO05D004798 1.3e-08 63.2 60 55.0
QL02p056177 Quercus lobata HOM05D000566 ORTHO05D004798 2.2e-08 62.4 57 52.6
QL05p018774 Quercus lobata HOM05D000566 ORTHO05D004798 2.2e-08 62.4 57 52.6
Sed0020325 Sechium edule HOM05D000566 ORTHO05D004798 1.1e-07 60.1 77 41.6
Haze_15875 Corylus avellana HOM05D000566 ORTHO05D004798 1.8e-07 59.3 62 48.4
CsaV3_7G035220 Cucumis sativus L. HOM05D000566 ORTHO05D004798 1.8e-07 59.3 80 41.2
COL.COLO4_30537 Corchorus olitorius HOM05D000428 ORTHO05D004798 2.4e-07 58.9 56 50.0
Rhsim08G0228800 Rhododendron simsii HOM05D000566 ORTHO05D004798 2.4e-07 58.9 61 47.5
RcHm_v2.0_Chr2g0141111 Rosa chinensis HOM05D000566 ORTHO05D004798 2.4e-07 58.9 72 43.1
Actinidia32114 Actinidia chinensis HOM05D000566 ORTHO05D004798 3.1e-07 58.5 60 48.3
Cfa003630 Carpinus fangiana HOM05D000566 ORTHO05D004798 3.1e-07 58.5 80 41.2
vmacro18840 Vaccinium macrocarpon HOM05D000566 ORTHO05D004798 3.1e-07 58.5 65 44.6
Sed0017098 Sechium edule HOM05D000566 ORTHO05D004798 5.4e-07 57.8 55 47.3
Thecc.06G102300 Theobroma cacao HOM05D000566 ORTHO05D004798 7.0e-07 57.4 56 48.2
MD09G1199900 Malus domestica HOM05D000566 ORTHO05D004798 1.6e-06 56.2 58 48.3
PGR102G0482 Punica granatum HOM05D000566 ORTHO05D004798 1.6e-06 56.2 60 43.3
Haze_15871 Corylus avellana HOM05D000566 ORTHO05D004798 2.0e-06 55.8 60 48.3
CANSAT56G2153 Cannabis sativa HOM05D000566 ORTHO05D004798 3.5e-06 55.1 72 37.5
Manes.11G031400 Manihot esculenta HOM05D000566 ORTHO05D004798 4.5e-06 54.7 58 50.0


User provided reference genes

Program Settings