Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.3e-90 336.3 163 100.0
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.3e-85 319.7 153 100.0
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 3.9e-66 255.0 156 80.1
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 2.4e-55 219.2 131 80.2
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 5.3e-55 218.0 154 71.4
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.2e-54 216.9 153 68.6
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 2.0e-54 216.1 156 72.4
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 2.0e-54 216.1 154 68.8
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 2.0e-54 216.1 153 68.0
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 7.7e-54 214.2 137 72.3
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.7e-53 213.0 151 70.9
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 2.2e-53 212.6 120 85.8
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 2.9e-53 212.2 148 68.2
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 4.2e-52 208.4 126 80.2
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 5.5e-52 208.0 113 83.2
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.7e-51 205.7 153 66.7
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 6.1e-51 204.5 156 66.0
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 8.0e-51 204.1 149 70.5
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 8.0e-51 204.1 157 65.0
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 8.0e-51 204.1 117 82.9
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 2.3e-50 202.6 127 78.7
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.0e-50 202.2 127 78.0
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.9e-50 201.8 127 78.0
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 5.2e-50 201.4 157 64.3
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 1.1e-49 200.3 113 80.5
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.5e-49 199.9 120 78.3
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 2.0e-49 199.5 120 77.5
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.6e-49 199.1 127 78.0
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 7.4e-49 197.6 119 79.0
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 2.2e-48 196.1 119 77.3
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 4.8e-48 194.9 127 70.9
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 6.3e-48 194.5 123 74.8
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.1e-47 193.7 124 75.0
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 1.8e-47 193.0 153 64.7
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.8e-47 193.0 118 78.0
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 1.8e-47 193.0 130 71.5
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 4.1e-47 191.8 99 85.9
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 5.3e-47 191.4 128 70.3
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 7.0e-47 191.0 99 85.9
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 7.0e-47 191.0 99 84.8
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 7.0e-47 191.0 127 73.2
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 7.0e-47 191.0 119 72.3
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 7.0e-47 191.0 142 68.3
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.2e-46 190.3 122 74.6
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.2e-46 190.3 99 86.9
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.2e-46 190.3 128 73.4
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 2.0e-46 189.5 127 66.9
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 2.0e-46 189.5 115 76.5
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 7.7e-46 187.6 128 71.9
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.0e-45 187.2 124 72.6
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 1.0e-45 187.2 138 69.6
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 1.3e-45 186.8 99 84.8
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.9e-45 185.7 99 81.8
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 2.9e-45 185.7 114 74.6
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 3.8e-45 185.3 99 84.8
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 5.0e-45 184.9 148 63.5
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 5.0e-45 184.9 108 77.8
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 5.0e-45 184.9 121 71.9
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 8.5e-45 184.1 99 83.8
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.1e-44 183.7 153 62.7
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.1e-44 183.7 99 82.8
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.1e-44 183.7 99 81.8
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.5e-44 183.3 113 76.1
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.9e-44 183.0 151 58.9
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.9e-44 183.0 151 58.9
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 3.2e-44 182.2 99 79.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 2.1e-43 179.5 155 60.6
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 3.6e-43 178.7 107 76.6
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 6.1e-43 177.9 99 80.8
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 8.0e-43 177.6 118 72.9
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 8.0e-43 177.6 118 72.9
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 2.3e-42 176.0 118 73.7
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 3.0e-42 175.6 118 72.0
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 3.0e-42 175.6 118 73.7
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 5.2e-42 174.9 118 72.9
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 8.8e-42 174.1 118 72.0
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 8.8e-42 174.1 113 69.9
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.2e-41 173.7 118 70.3
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.5e-41 173.3 99 80.8
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 3.4e-41 172.2 118 72.0
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.7e-40 169.9 124 62.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 2.2e-40 169.5 85 89.4
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 2.8e-40 169.1 167 55.1
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.8e-40 169.1 118 69.5
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.8e-39 166.4 165 57.6
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.8e-39 166.4 126 65.9
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 5.9e-38 161.4 99 73.7
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 5.0e-37 158.3 116 62.9
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 2.5e-36 156.0 111 67.6
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 2.5e-36 156.0 180 53.3
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.3e-32 143.7 97 64.9
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 2.9e-29 132.5 127 56.7
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 2.5e-28 129.4 103 57.3
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.5e-28 128.3 99 63.6
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 6.1e-27 124.8 95 55.8
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 5.2e-26 121.7 63 87.3
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.3e-24 117.1 120 52.5
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.1e-23 114.0 129 50.4
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.8e-23 113.2 59 86.4
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 3.2e-23 112.5 59 86.4
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.7e-22 109.4 64 82.8
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 3.5e-22 109.0 104 52.9
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 8.6e-21 104.4 59 78.0
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 1.6e-14 83.6 69 59.4
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 4.7e-11 72.0 39 79.5
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 2.6e-09 66.2 38 71.1
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.4e-09 65.9 33 90.9
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 5.4e-07 58.5 99 34.3


User provided reference genes

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