Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 5.7e-200 700.7 341 100.0
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 4.4e-168 594.7 340 85.0
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 4.9e-159 564.7 317 84.2
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.9e-155 552.7 344 79.7
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.6e-154 549.7 339 77.0
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 4.7e-154 548.1 340 77.1
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 5.7e-152 541.2 334 76.6
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 5.7e-152 541.2 299 84.6
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.7e-151 539.7 337 77.7
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 2.2e-151 539.3 341 77.1
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.9e-151 538.9 337 78.3
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 4.9e-151 538.1 306 84.3
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 8.3e-151 537.3 323 78.0
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 8.3e-151 537.3 301 83.4
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 5.4e-150 534.6 315 81.6
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.0e-149 532.7 315 81.3
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 4.6e-149 531.6 315 81.0
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 5.9e-149 531.2 316 80.1
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.7e-148 529.6 310 81.3
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.0e-148 528.9 315 81.0
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 1.1e-147 526.9 305 82.0
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 3.1e-145 518.8 343 73.2
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.0e-145 518.5 339 74.3
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 4.0e-145 518.5 343 73.8
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 1.2e-144 516.9 312 78.8
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 7.5e-144 514.2 343 73.2
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.2e-143 512.7 307 78.2
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 8.3e-143 510.8 307 77.2
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.6e-141 506.5 303 79.5
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.6e-141 506.5 338 73.1
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 2.0e-141 506.1 307 76.9
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.7e-140 503.1 286 79.7
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.7e-140 503.1 313 74.1
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 3.0e-140 502.3 305 80.0
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 3.9e-140 501.9 284 80.6
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 3.9e-140 501.9 302 78.1
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 5.0e-140 501.5 285 81.1
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 6.6e-140 501.1 312 74.4
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 2.5e-139 499.2 283 81.6
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 4.3e-139 498.4 304 77.6
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 5.6e-139 498.0 329 73.9
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 7.3e-139 497.7 284 82.0
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 9.5e-139 497.3 313 76.4
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.6e-138 496.5 306 75.5
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.8e-138 495.7 315 72.7
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 2.8e-138 495.7 286 80.8
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 3.6e-138 495.4 334 72.5
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 8.1e-138 494.2 283 81.6
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 1.1e-137 493.8 298 77.5
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 1.8e-137 493.0 284 81.3
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 3.1e-137 492.3 368 69.8
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 4.0e-137 491.9 297 78.1
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 2.0e-136 489.6 305 75.7
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 2.6e-136 489.2 311 73.3
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 5.8e-136 488.0 286 76.2
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 1.7e-135 486.5 286 77.3
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.7e-135 486.5 305 75.4
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 2.9e-135 485.7 287 76.7
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 4.1e-134 481.9 332 69.0
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 4.1e-134 481.9 332 69.0
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.6e-133 479.9 287 77.7
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 1.7e-132 476.5 341 68.6
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 3.9e-132 475.3 295 71.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 6.6e-132 474.6 271 80.4
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 4.3e-131 471.9 304 74.3
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 7.3e-131 471.1 323 70.9
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 2.8e-130 469.2 285 76.1
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 3.6e-130 468.8 305 73.4
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 3.6e-130 468.8 303 72.6
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 6.2e-130 468.0 311 71.4
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 8.1e-130 467.6 304 73.4
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.1e-129 467.2 304 72.4
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.1e-129 467.2 304 72.7
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 3.1e-129 465.7 305 73.1
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 4.4e-128 461.8 305 72.5
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.7e-127 459.9 354 64.7
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.2e-127 459.5 304 71.7
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 3.7e-127 458.8 305 71.8
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 4.1e-126 455.3 323 70.9
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.2e-125 453.8 289 73.4
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 6.6e-124 448.0 284 72.2
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 8.1e-122 441.0 296 69.3
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 7.6e-120 434.5 248 81.5
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 2.9e-119 432.6 312 64.4
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.4e-118 428.3 287 70.0
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 7.3e-115 417.9 245 78.8
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 3.1e-113 412.5 244 78.3
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 1.5e-112 410.2 304 61.5
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 3.4e-112 409.1 304 65.8
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 9.9e-112 407.5 246 75.6
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 1.0e-108 397.5 301 62.5
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 2.8e-106 389.4 306 61.1
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 2.4e-105 386.3 314 61.5
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.9e-103 379.4 284 59.9
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 3.7e-98 362.5 227 75.8
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 4.5e-96 355.5 282 57.8
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.1e-86 324.3 195 74.9
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.1e-85 320.1 153 100.0
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 2.6e-72 276.6 297 48.1
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 5.0e-71 272.3 192 69.8
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 1.0e-60 238.0 144 77.8
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.0e-51 207.2 109 83.5
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 8.3e-50 201.8 114 76.3
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.1e-45 187.2 105 83.8
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.2e-40 171.4 283 36.4
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.5e-40 169.9 111 72.1
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 4.3e-38 162.9 155 57.4
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 6.1e-37 159.1 157 58.0
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 1.9e-30 137.5 85 76.5
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 5.0e-23 112.8 128 50.0
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 3.9e-15 86.7 55 67.3
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 3.3e-14 83.6 69 59.4
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.4e-12 78.2 49 73.5
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 9.9e-11 72.0 39 79.5
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.9e-10 70.5 42 73.8


User provided reference genes

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