Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0064F.1_g034930 Hydrangea macrophylla HOM05D006431 ORTHO05D007918 2.5e-86 322.0 158 100.0
Hma1.2p1_1131F.1_g260030 Hydrangea macrophylla HOM05D006431 ORTHO05D007918 2.1e-85 318.9 158 98.7
Dinv31736 Davidia involucrata HOM05D006431 ORTHO05D007918 3.0e-31 139.0 87 79.3
CSS0044043 Camellia sinensis var. sinensis HOM05D006431 ORTHO05D007918 9.8e-30 134.0 87 74.7
Nitab4.5_0006555g0050 Nicotiana tabacum HOM05D006431 ORTHO05D007918 7.0e-28 127.9 95 68.4
Actinidia03906 Actinidia chinensis HOM05D006431 ORTHO05D007918 2.0e-27 126.3 87 74.7
Actinidia04011 Actinidia chinensis HOM05D006431 ORTHO05D007918 2.0e-27 126.3 87 74.7
Nitab4.5_0001801g0020 Nicotiana tabacum HOM05D006431 ORTHO05D007918 2.0e-27 126.3 95 67.4
Peaxi162Scf01662g00115 Petunia axillaris HOM05D006431 ORTHO05D007918 2.0e-27 126.3 95 67.4
vmacro07456 Vaccinium macrocarpon HOM05D006431 ORTHO05D007918 2.7e-27 125.9 87 71.3
CAN.G841.8 Capsicum annuum HOM05D006431 ORTHO05D007918 3.5e-27 125.6 95 67.4
Cfa016661 Carpinus fangiana HOM05D006431 ORTHO05D007918 3.5e-27 125.6 87 71.3
GSVIVG01033921001 Vitis vinifera HOM05D006431 ORTHO05D007918 5.9e-27 124.8 95 66.3
ClCG10G018580 Citrullus lanatus HOM05D006431 ORTHO05D007918 7.8e-27 124.4 95 67.4
Atru.chr8.1414 Acer truncatum HOM05D006431 ORTHO05D007918 1.0e-26 124.0 95 62.1
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 1.0e-26 124.0 87 71.3
Aqoxy2G01023 Aquilegia oxysepala HOM05D006431 ORTHO05D007918 1.7e-26 123.2 87 69.0
Haze_19670 Corylus avellana HOM05D006431 ORTHO05D007918 1.7e-26 123.2 87 70.1
MD14G1033800 Malus domestica HOM05D006431 ORTHO05D007918 1.7e-26 123.2 88 73.9
Solyc10g083160.2 Solanum lycopersicum HOM05D006431 ORTHO05D007918 2.3e-26 122.9 95 67.4
MSTRG.26617 Avicennia marina HOM05D006431 ORTHO05D007918 3.0e-26 122.5 87 71.3
QL07p037629 Quercus lobata HOM05D006431 ORTHO05D007918 3.0e-26 122.5 87 69.0
RcHm_v2.0_Chr3g0475131 Rosa chinensis HOM05D006431 ORTHO05D007918 3.0e-26 122.5 88 71.6
FvH4_6g19780 Fragaria vesca HOM05D006431 ORTHO05D007918 3.9e-26 122.1 88 71.6
FAN14G3124 Fragaria x ananassa HOM05D006431 ORTHO05D007918 3.9e-26 122.1 88 71.6
MELO3C009510.2 Cucumis melo HOM05D006431 ORTHO05D007918 8.6e-26 120.9 95 65.3
FAN09G4399 Fragaria x ananassa HOM05D006431 ORTHO05D007918 8.6e-26 120.9 88 71.6
Rhsim03G0067800 Rhododendron simsii HOM05D006431 ORTHO05D007918 8.6e-26 120.9 87 69.0
SalBow5G2287 Salvia bowleyana HOM05D006431 ORTHO05D007918 1.1e-25 120.6 87 69.0
Ah.15g090560 Amaranthus hybridus HOM05D006431 ORTHO05D007918 1.5e-25 120.2 87 67.8
Prupe.7G099200 Prunus persica HOM05D006431 ORTHO05D007918 1.5e-25 120.2 89 74.2
Sopen10g032630 Solanum pennellii HOM05D006431 ORTHO05D007918 1.5e-25 120.2 95 65.3
AUR62006262 Chenopodium quinoa HOM05D006431 ORTHO05D007918 2.5e-25 119.4 87 69.0
FAN02G3461 Fragaria x ananassa HOM05D006431 ORTHO05D007918 2.5e-25 119.4 88 71.6
Cc00_g18360 Coffea canephora HOM05D006431 ORTHO05D007918 3.3e-25 119.0 92 68.5
Migut.L01812 Erythranthe guttata HOM05D006431 ORTHO05D007918 3.3e-25 119.0 95 63.2
PSO801G0231 Papaver somniferum HOM05D006431 ORTHO05D007918 3.3e-25 119.0 87 69.0
DCAR_013426 Daucus carota HOM05D006431 ORTHO05D007918 4.3e-25 118.6 87 66.7
AUR62028512 Chenopodium quinoa HOM05D006431 ORTHO05D007918 5.6e-25 118.2 87 67.8
FAN05G2067 Fragaria x ananassa HOM05D006431 ORTHO05D007918 7.3e-25 117.9 88 70.5
Lsat_1_v5_gn_1_57580 Lactuca sativa HOM05D006431 ORTHO05D007918 7.3e-25 117.9 87 71.3
arahy.Tifrunner.gnm1.ann1.262DHG Arachis hypogaea HOM05D006431 ORTHO05D007918 9.5e-25 117.5 89 66.3
BcaC06g32355 Brassica carinata HOM05D006431 ORTHO05D007918 9.5e-25 117.5 87 67.8
unitig_899.g15199 Utricularia gibba HOM05D006431 ORTHO05D007918 9.5e-25 117.5 87 67.8
BraA10t45060Z Brassica rapa HOM05D006431 ORTHO05D007918 1.2e-24 117.1 87 67.8
FAN05G1952 Fragaria x ananassa HOM05D006431 ORTHO05D007918 1.2e-24 117.1 88 70.5
Manes.08G030500 Manihot esculenta HOM05D006431 ORTHO05D007918 1.2e-24 117.1 87 69.0
CsaV3_3G037660 Cucumis sativus L. HOM05D006431 ORTHO05D007918 1.6e-24 116.7 95 63.2
PSO801G0006 Papaver somniferum HOM05D006431 ORTHO05D007918 1.6e-24 116.7 87 67.8
Gorai.006G151400 Gossypium raimondii HOM05D006431 ORTHO05D007918 2.1e-24 116.3 87 69.0
BcaC06g32336 Brassica carinata HOM05D006431 ORTHO05D007918 2.8e-24 115.9 87 66.7
BolC9t59819H Brassica oleracea HOM05D006431 ORTHO05D007918 2.8e-24 115.9 87 66.7
CiPaw.10G014500 Carya illinoinensis HOM05D006431 ORTHO05D007918 2.8e-24 115.9 87 67.8
A10p30220 Brassica napus HOM05D006431 ORTHO05D007918 4.7e-24 115.2 87 66.7
C09p70630 Brassica napus HOM05D006431 ORTHO05D007918 4.7e-24 115.2 87 66.7
PSO339G1068 Papaver somniferum HOM05D006431 ORTHO05D007918 4.7e-24 115.2 87 69.0
Gohir.A09G137300 Gossypium hirsutum HOM05D006431 ORTHO05D007918 6.2e-24 114.8 87 67.8
Thecc.05G099600 Theobroma cacao HOM05D006431 ORTHO05D007918 6.2e-24 114.8 95 62.1
Carub.0006s0514 Capsella rubella HOM05D006431 ORTHO05D007918 8.0e-24 114.4 87 64.4
SGA_v2.0_scaffold35G14028 Striga asiatica HOM05D006431 ORTHO05D007918 8.0e-24 114.4 95 61.1
Sabra06G0159100 Salix brachista HOM05D006431 ORTHO05D007918 1.4e-23 113.6 87 65.5
Sp6g36610 Schrenkiella parvula HOM05D006431 ORTHO05D007918 1.4e-23 113.6 87 66.7
THA.LOC104826813 Tarenaya hassleriana HOM05D006431 ORTHO05D007918 1.8e-23 113.2 87 66.7
arahy.Tifrunner.gnm1.ann1.P24J4F Arachis hypogaea HOM05D006431 ORTHO05D007918 2.3e-23 112.8 89 64.0
HanXRQChr01g0025171 Helianthus annuus HOM05D006431 ORTHO05D007918 3.1e-23 112.5 87 66.7
TPR.G23342 Trifolium pratense HOM05D006431 ORTHO05D007918 3.1e-23 112.5 87 63.2
Cpa.g.sc104.72 Carica papaya HOM05D006431 ORTHO05D007918 6.8e-23 111.3 95 58.9
Potri.006G206200 Populus trichocarpa HOM05D006431 ORTHO05D007918 8.9e-23 110.9 87 63.2
ECA248G2099 Erigeron canadensis HOM05D006431 ORTHO05D007918 1.2e-22 110.5 88 64.8
CARHR206960 Cardamine hirsuta HOM05D006431 ORTHO05D007918 1.5e-22 110.2 87 63.2
Sed0017910 Sechium edule HOM05D006431 ORTHO05D007918 2.0e-22 109.8 95 61.1
VMungo1383G3444 Vigna mungo HOM05D006431 ORTHO05D007918 2.0e-22 109.8 88 63.6
Ciclev10011702m.g Citrus clementina HOM05D006431 ORTHO05D007918 2.6e-22 109.4 70 74.3
Glyma.03G199700 Glycine max HOM05D006431 ORTHO05D007918 2.6e-22 109.4 88 63.6
Glyma.19G197300 Glycine max HOM05D006431 ORTHO05D007918 2.6e-22 109.4 88 64.8
Lj1g0021923 Lotus japonicus HOM05D006431 ORTHO05D007918 2.6e-22 109.4 87 62.1
Medtr7g105640 Medicago truncatula HOM05D006431 ORTHO05D007918 2.6e-22 109.4 87 62.1
TWI74G1016 Tripterygium wilfordii HOM05D006431 ORTHO05D007918 2.6e-22 109.4 87 62.1
Eucgr.A02614 Eucalyptus grandis HOM05D006431 ORTHO05D007918 3.4e-22 109.0 89 66.3
Thhalv10013633m.g Eutrema salsugineum HOM05D006431 ORTHO05D007918 3.4e-22 109.0 87 64.4
Psat3g030600 Pisum sativum HOM05D006431 ORTHO05D007918 3.4e-22 109.0 87 60.9
Hund03878 Selenicereus undatus HOM05D006431 ORTHO05D007918 4.4e-22 108.6 87 62.1
CDE12G0869 Ceratophyllum demersum HOM05D006431 ORTHO05D007918 5.8e-22 108.2 87 60.9
AT5G06260 Arabidopsis thaliana HOM05D006431 ORTHO05D007918 7.5e-22 107.8 87 60.9
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 7.5e-22 107.8 88 62.5
CANSAT64G0076 Cannabis sativa HOM05D006431 ORTHO05D007918 6.4e-21 104.8 89 61.8
PGR004G1888 Punica granatum HOM05D006431 ORTHO05D007918 8.3e-21 104.4 87 62.1
Aa31sc52G40 Aethionema arabicum HOM05D006431 ORTHO05D007918 1.1e-20 104.0 91 58.2
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 1.1e-20 104.0 87 62.1
AT2G45380 Arabidopsis thaliana HOM05D002260 ORTHO05D000476 1.1e-20 104.0 111 49.5
Lalb_Chr20g0111521 Lupinus albus HOM05D006431 ORTHO05D007918 3.2e-20 102.4 87 57.5
AL6G16280 Arabidopsis lyrata HOM05D006431 ORTHO05D007918 1.6e-19 100.1 88 60.2
HPP92_023016 Vanilla planifolia HOM05D006431 ORTHO05D007918 1.6e-19 100.1 87 59.8
AT4G34070 Arabidopsis thaliana HOM05D006431 ORTHO05D007918 2.0e-19 99.8 86 59.3
AagrBONN_evm.TU.Sc2ySwM_368.1429 Anthoceros agrestis HOM05D006431 ORTHO05D007918 2.3e-18 96.3 93 58.1
TAR623G0798 Trochodendron aralioides HOM05D006431 ORTHO05D007918 5.0e-18 95.1 69 69.6
Pp3c10_6920 Physcomitrium patens HOM05D006431 ORTHO05D007918 1.6e-16 90.1 116 49.1
SMO358G0080 Selaginella moellendorffii HOM05D006431 ORTHO05D007918 2.8e-16 89.4 88 47.7
Mapoly0002s0288 Marchantia polymorpha HOM05D006431 ORTHO05D007918 1.4e-15 87.0 92 52.2
Os12g0157200 Oryza sativa ssp. japonica HOM05D006431 ORTHO05D007918 1.8e-15 86.7 91 51.6
Nn2g14247 Nelumbo nucifera HOM05D006431 ORTHO05D007918 3.7e-13 79.0 87 52.9
Zm00001eb407020 Zea mays HOM05D006431 ORTHO05D007918 1.2e-11 73.9 91 47.3
Duzib093G0136 Durio zibethinus HOM05D006431 ORTHO05D007918 3.3e-09 65.9 86 50.0


User provided reference genes

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