Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.5e-53 212.6 109 100.0
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 2.0e-45 185.7 109 83.5
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 2.6e-45 185.3 109 86.2
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.6e-45 185.3 109 86.2
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.6e-45 185.3 109 86.2
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 2.6e-45 185.3 109 86.2
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.3e-45 184.9 109 84.4
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 3.3e-45 184.9 109 86.2
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 4.4e-45 184.5 109 84.4
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.3e-44 183.0 109 84.4
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 3.7e-44 181.4 109 83.5
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 6.3e-44 180.6 109 81.7
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 5.3e-43 177.6 104 85.6
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 5.3e-43 177.6 109 80.7
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.2e-42 176.4 109 81.7
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.6e-42 176.0 101 85.1
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.0e-42 175.6 101 84.2
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.6e-42 175.3 101 82.2
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.5e-42 174.9 109 82.6
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.5e-42 174.9 109 82.6
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 1.0e-41 173.3 107 79.4
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.3e-41 172.9 109 81.7
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.3e-41 172.9 98 84.7
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.3e-41 172.9 108 80.6
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.9e-41 171.8 109 80.7
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.9e-41 171.8 107 76.6
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 3.8e-41 171.4 99 83.8
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 5.0e-41 171.0 109 78.0
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 6.5e-41 170.6 107 77.6
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 8.5e-41 170.2 101 82.2
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.1e-40 169.9 107 75.7
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.1e-40 169.9 107 76.6
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.5e-40 169.5 107 76.6
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.9e-40 169.1 99 81.8
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.2e-40 168.3 102 79.4
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.2e-40 167.9 109 76.1
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 5.5e-40 167.5 107 74.8
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 5.5e-40 167.5 101 79.2
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 5.5e-40 167.5 98 80.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 7.2e-40 167.2 107 76.6
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 7.2e-40 167.2 105 79.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.4e-40 166.8 109 76.1
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.6e-39 166.0 97 80.4
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.6e-39 166.0 101 77.2
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.6e-39 166.0 101 77.2
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-39 165.6 102 76.5
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.1e-39 165.6 102 76.5
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 2.1e-39 165.6 107 75.7
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.1e-39 165.6 102 76.5
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 2.1e-39 165.6 98 82.7
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 2.1e-39 165.6 101 78.2
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 2.1e-39 165.6 109 76.1
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 2.1e-39 165.6 111 76.6
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.7e-39 165.2 101 78.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 2.7e-39 165.2 97 80.4
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.6e-39 164.9 98 81.6
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 4.7e-39 164.5 102 76.5
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 6.1e-39 164.1 98 81.6
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.4e-38 162.9 101 78.2
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.4e-38 162.9 99 77.8
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.3e-38 162.2 100 80.0
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.3e-38 162.2 109 74.3
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 3.0e-38 161.8 107 73.8
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 3.0e-38 161.8 99 78.8
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 8.8e-38 160.2 101 74.3
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 8.8e-38 160.2 97 78.4
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.3e-37 158.3 153 58.2
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.3e-37 158.3 98 75.5
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 7.5e-37 157.1 101 72.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 9.7e-37 156.8 101 76.2
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.7e-36 156.0 106 72.6
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.2e-36 155.6 92 80.4
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 2.2e-36 155.6 102 74.5
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.2e-36 155.6 99 79.8
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.2e-36 155.6 99 79.8
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 2.8e-36 155.2 92 84.8
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.7e-36 154.8 102 74.5
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.4e-35 152.9 92 82.6
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.4e-35 152.9 92 82.6
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 3.1e-35 151.8 102 74.5
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 9.1e-35 150.2 101 73.3
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 9.1e-35 150.2 92 81.5
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.0e-34 149.1 137 59.9
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.7e-34 148.7 92 76.1
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 7.7e-34 147.1 88 83.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 2.2e-33 145.6 95 76.8
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 5.0e-33 144.4 95 77.9
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 6.5e-33 144.1 92 76.1
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 8.5e-33 143.7 111 69.4
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 1.1e-32 143.3 92 77.2
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.9e-32 142.5 95 75.8
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.1e-31 139.0 88 79.5
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 4.7e-31 137.9 88 79.5
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 4.0e-30 134.8 89 78.7
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 2.0e-29 132.5 80 80.0
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 9.8e-29 130.2 103 65.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 2.2e-28 129.0 81 77.8
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 2.2e-28 129.0 91 65.9
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 4.1e-27 124.8 89 67.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 5.4e-27 124.4 81 76.5
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.4e-27 124.4 90 65.6
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 9.5e-24 113.6 89 68.5
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.6e-23 112.8 82 72.0
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.1e-23 110.9 78 75.6
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.0e-22 110.2 99 55.6
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.0e-21 105.9 70 75.7
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.0e-21 105.9 89 57.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 2.6e-21 105.5 80 63.8
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 4.4e-21 104.8 56 89.3
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.7e-20 102.8 58 84.5
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-18 96.7 55 83.6
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.6e-18 96.3 98 53.1
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 8.0e-15 84.0 58 70.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 7.5e-13 77.4 54 75.9
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 7.8e-10 67.4 54 61.1
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.8e-10 67.4 53 67.9


User provided reference genes

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