Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 9.7e-266 919.5 425 100.0
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 1.4e-107 394.0 199 88.9
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 1.9e-99 367.1 199 82.4
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 1.9e-96 357.1 199 78.4
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 3.3e-96 356.3 197 77.2
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 3.3e-96 356.3 198 77.8
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 9.5e-96 354.8 196 79.1
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 9.5e-96 354.8 197 76.1
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 1.2e-95 354.4 196 79.1
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 2.8e-95 353.2 199 75.9
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 3.6e-95 352.8 199 75.9
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 6.2e-95 352.1 195 77.4
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 6.8e-94 348.6 194 75.8
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 8.9e-94 348.2 196 77.0
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 3.4e-93 346.3 199 77.4
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 4.9e-92 342.4 200 74.5
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 8.3e-92 341.7 197 75.1
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 3.2e-91 339.7 199 73.4
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 4.1e-91 339.3 199 72.4
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 4.1e-91 339.3 196 73.5
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 2.7e-90 336.7 198 71.7
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 4.6e-90 335.9 188 75.5
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 6.0e-90 335.5 197 72.1
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 1.7e-89 334.0 199 71.4
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 8.6e-89 331.6 196 71.4
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 1.5e-88 330.9 199 70.4
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 5.6e-88 328.9 199 70.9
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 1.6e-87 327.4 197 73.6
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 2.8e-87 326.6 199 74.4
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 6.2e-87 325.5 207 69.6
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 1.8e-86 323.9 197 68.5
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 4.0e-86 322.8 196 73.5
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 5.2e-86 322.4 199 68.8
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 8.9e-86 321.6 199 70.4
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 1.5e-85 320.9 194 71.6
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 1.5e-85 320.9 194 71.6
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 2.0e-85 320.5 201 70.1
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 4.4e-85 319.3 197 69.5
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 5.8e-85 318.9 199 68.3
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 5.8e-85 318.9 199 69.8
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 9.9e-85 318.2 195 69.2
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 1.3e-84 317.8 199 70.4
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 2.2e-84 317.0 199 71.4
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 1.9e-83 313.9 199 70.4
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 4.1e-83 312.8 201 68.2
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 7.1e-83 312.0 197 67.5
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 7.1e-83 312.0 197 66.0
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 1.2e-82 311.2 197 68.0
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 2.1e-82 310.5 197 66.0
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.1e-82 310.5 200 68.0
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 2.7e-82 310.1 197 66.0
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 6.0e-82 308.9 199 69.8
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 7.8e-82 308.5 197 66.5
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 7.8e-82 308.5 205 64.9
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 1.0e-81 308.1 197 66.0
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 5.1e-81 305.8 198 66.2
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 5.1e-81 305.8 198 66.2
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 5.1e-81 305.8 201 66.2
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 1.1e-80 304.7 196 67.9
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 1.5e-80 304.3 196 68.4
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.5e-80 304.3 196 69.9
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 5.6e-80 302.4 197 65.5
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 5.6e-80 302.4 198 63.6
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 6.2e-79 298.9 198 64.6
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 6.2e-79 298.9 198 64.6
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 3.1e-78 296.6 196 64.8
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 1.5e-77 294.3 170 75.3
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.6e-77 293.5 190 67.4
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 5.8e-77 292.4 204 62.7
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 7.3e-72 275.4 196 58.2
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 9.6e-72 275.0 196 58.2
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 1.2e-71 274.6 199 64.3
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 6.2e-71 272.3 226 55.8
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 1.1e-70 271.6 189 62.4
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 1.4e-70 271.2 200 61.0
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 2.6e-69 266.9 155 74.8
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 7.6e-69 265.4 192 60.4
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 3.8e-68 263.1 160 74.4
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 8.4e-68 261.9 201 58.2
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 3.2e-67 260.0 160 73.8
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 1.7e-65 254.2 184 60.3
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 1.5e-64 251.1 198 56.1
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 3.3e-64 250.0 150 74.0
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 9.6e-64 248.4 169 64.5
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 4.0e-62 243.0 154 68.2
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 1.2e-61 241.5 199 56.3
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 1.4e-59 234.6 242 48.8
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 1.2e-58 231.5 139 71.9
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 3.5e-58 229.9 133 76.7
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 1.9e-48 197.6 113 77.0
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 7.4e-48 195.7 130 64.6
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 4.8e-47 193.0 154 51.9
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 3.5e-42 176.8 245 38.8
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 6.1e-42 176.0 114 70.2
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 7.9e-42 175.6 245 38.8
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 6.7e-41 172.6 134 54.5
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 6.7e-41 172.6 113 64.6
Duzib264G1273 Durio zibethinus HOM05D006254 ORTHO05D007409 4.1e-38 163.3 82 85.4
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 1.2e-37 161.8 98 71.4
RcHm_v2.0_Chr2g0157061 Rosa chinensis HOM05D006254 ORTHO05D007409 1.6e-34 151.4 92 71.7
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 2.0e-32 144.4 207 35.7
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 4.8e-31 139.8 142 44.4
Mapoly0003s0196 Marchantia polymorpha HOM05D006254 ORTHO05D007409 9.1e-30 135.6 201 35.8
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 2.6e-29 134.0 87 66.7
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 1.7e-28 131.3 80 68.8
MD11G1077800 Malus domestica HOM05D006254 ORTHO05D007409 4.7e-26 123.2 68 75.0
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 2.0e-24 117.9 63 76.2
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 4.1e-22 110.2 84 56.0
CBR_g38543 Chara braunii HOM05D006254 ORTHO05D007409 1.7e-20 104.8 199 30.7
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 3.2e-19 100.5 57 68.4
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis HOM05D006254 ORTHO05D007409 3.7e-15 87.0 158 31.0
Actinidia38918 Actinidia chinensis HOM05D006254 ORTHO05D007409 1.3e-12 78.6 42 76.2
arahy.Tifrunner.gnm1.ann1.SX6F5A Arachis hypogaea HOM05D006254 ORTHO05D007409 2.9e-12 77.4 87 48.3
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 5.0e-12 76.6 44 70.5
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 1.9e-11 74.7 37 81.1
BolC4t22791H Brassica oleracea HOM05D006254 ORTHO05D007409 4.7e-10 70.1 54 51.9


User provided reference genes

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