Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 3.6e-191 671.4 335 100.0
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 1.6e-135 486.5 333 73.9
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 6.7e-129 464.5 338 68.6
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 2.7e-122 442.6 323 70.3
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 2.2e-119 433.0 327 67.9
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 8.2e-119 431.0 340 65.6
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 1.1e-118 430.6 334 64.1
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 6.5e-116 421.4 340 63.8
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 9.4e-115 417.5 340 63.8
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 8.0e-114 414.5 323 65.0
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 5.2e-113 411.8 335 63.3
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 1.5e-112 410.2 338 63.0
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 4.4e-112 408.7 335 63.0
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 3.7e-111 405.6 334 63.2
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 4.8e-111 405.2 338 60.4
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 4.1e-110 402.1 331 61.0
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 5.3e-110 401.7 337 62.6
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 1.2e-106 390.6 357 58.8
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 1.2e-104 384.0 323 62.5
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 2.0e-104 383.3 326 60.4
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 3.4e-104 382.5 335 57.6
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 3.4e-104 382.5 381 54.1
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 4.4e-104 382.1 330 58.8
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 1.2e-101 374.0 333 57.7
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 1.6e-101 373.6 302 63.9
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 4.5e-101 372.1 327 60.2
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.3e-100 369.8 325 58.5
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 1.5e-99 367.1 341 58.9
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 3.2e-99 365.9 341 55.4
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 9.5e-99 364.4 337 56.7
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 5.2e-97 358.6 341 54.8
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 6.8e-97 358.2 342 57.0
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 5.7e-96 355.1 335 58.2
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 7.5e-96 354.8 339 54.9
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 9.8e-96 354.4 337 53.7
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.3e-95 354.0 338 56.5
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 1.3e-95 354.0 338 56.8
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 2.2e-95 353.2 334 56.0
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 4.9e-95 352.1 283 66.1
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.4e-94 350.5 293 59.7
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 1.8e-94 350.1 339 55.2
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 7.0e-94 348.2 323 57.9
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 9.2e-94 347.8 337 55.5
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 1.2e-93 347.4 275 66.9
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 2.7e-93 346.3 336 53.9
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 4.5e-93 345.5 336 53.6
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 2.3e-92 343.2 330 54.5
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 2.9e-92 342.8 331 55.3
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 3.8e-92 342.4 340 55.0
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 6.6e-92 341.7 340 54.1
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 8.6e-92 341.3 344 53.5
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 8.6e-92 341.3 336 55.7
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 8.6e-92 341.3 335 55.8
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 1.2e-90 337.4 334 53.9
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 1.6e-90 337.0 335 54.6
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 3.6e-90 335.9 330 55.8
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 4.7e-90 335.5 327 53.5
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 6.1e-90 335.1 328 53.7
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 6.1e-90 335.1 330 56.1
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 8.0e-90 334.7 345 53.0
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 3.4e-88 329.3 408 47.3
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 5.7e-88 328.6 330 50.9
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 3.7e-87 325.9 338 55.0
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 1.1e-86 324.3 344 50.9
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 9.2e-86 321.2 330 53.6
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 9.2e-86 321.2 280 63.2
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 1.3e-84 317.4 324 53.4
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 3.9e-84 315.8 329 52.6
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 6.8e-81 305.1 258 62.8
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 2.6e-80 303.1 333 49.2
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 6.0e-77 292.0 280 54.6
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 1.9e-75 287.0 326 50.9
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 6.2e-74 282.0 325 48.9
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 3.4e-72 276.2 336 46.7
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 1.4e-70 270.8 331 43.8
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 4.6e-69 265.8 249 57.0
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 3.3e-67 259.6 222 59.0
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 2.1e-66 256.9 328 45.4
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 7.6e-64 248.4 219 60.3
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 3.3e-59 233.0 199 59.3
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 3.8e-55 219.5 336 39.6
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 2.6e-48 196.8 345 38.6
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 9.9e-48 194.9 337 38.6
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 2.8e-42 176.8 111 76.6
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.4e-38 164.5 105 74.3
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 1.9e-38 164.1 107 73.8
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 2.7e-37 160.2 105 72.4
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 3.5e-37 159.8 160 51.2
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 6.0e-37 159.1 110 71.8
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 7.9e-37 158.7 338 32.8
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 1.1e-33 148.3 98 69.4
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 2.2e-31 140.6 144 52.8
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 4.3e-19 99.8 158 36.1
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.8e-17 94.4 74 63.5
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 1.3e-15 88.2 377 24.7
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 8.5e-15 85.5 59 71.2
PRCOL_00006630 Prasinoderma coloniale HOM05D007524 ORTHO05D009475 2.0e-08 64.3 207 25.6


User provided reference genes

Program Settings