Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-92 342.8 204 100.0
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-92 342.8 204 100.0
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.3e-79 299.3 235 67.2
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.6e-79 297.4 235 66.8
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.6e-79 297.4 235 66.8
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.4e-67 258.5 233 58.4
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.3e-62 242.3 211 60.7
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.7e-58 229.9 234 55.6
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.2e-57 225.3 234 52.6
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.5e-57 224.9 231 53.7
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.5e-56 222.2 209 60.8
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-54 217.2 208 55.8
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-54 217.2 227 53.3
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.5e-54 216.1 227 53.3
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.2e-53 211.5 232 50.0
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 4.0e-52 208.8 230 50.0
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.9e-52 208.0 229 51.5
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 1.5e-51 206.8 231 51.1
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 3.4e-51 205.7 232 49.6
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 3.9e-47 192.2 218 46.8
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 5.1e-47 191.8 225 45.3
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 4.3e-46 188.7 198 49.5
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 7.4e-46 188.0 134 70.1
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 9.6e-46 187.6 226 46.0
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.1e-44 182.6 227 44.5
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 3.1e-44 182.6 226 45.6
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 9.0e-44 181.0 224 43.3
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-43 179.9 225 43.6
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 5.9e-43 178.3 226 44.7
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 7.6e-43 177.9 226 44.2
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.0e-42 177.6 226 45.1
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.0e-42 177.6 226 45.1
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-42 177.2 228 42.5
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-42 177.2 228 42.5
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-42 177.2 228 42.5
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.9e-42 176.0 229 41.9
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 2.9e-42 176.0 225 43.6
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 2.9e-42 176.0 225 43.6
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 6.5e-42 174.9 230 43.5
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-41 172.6 225 42.7
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 4.2e-41 172.2 225 42.7
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-40 169.5 227 44.1
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-40 169.5 224 42.0
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 6.1e-40 168.3 240 42.9
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-39 167.5 227 41.9
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-39 166.8 225 41.8
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.9e-39 165.6 227 41.0
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.7e-39 164.9 229 39.7
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-39 164.9 224 41.5
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.7e-39 164.5 231 39.8
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-38 162.9 224 40.6
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 5.7e-38 161.8 229 40.6
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 5.7e-38 161.8 223 42.2
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.4e-38 161.4 216 41.7
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 9.7e-38 161.0 237 40.5
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 2.8e-37 159.5 235 42.1
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 3.7e-37 159.1 123 64.2
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 6.3e-37 158.3 222 40.5
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-36 157.5 236 39.0
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-36 157.1 224 40.2
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.4e-36 156.4 229 39.3
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 3.1e-36 156.0 223 41.7
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.1e-36 155.6 224 40.6
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.3e-36 155.2 224 38.8
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.5e-35 153.7 274 34.7
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 5.9e-35 151.8 129 61.2
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-34 149.1 189 43.9
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-34 149.1 189 43.9
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.5e-34 148.3 133 54.9
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-33 147.5 224 39.7
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-33 147.1 223 37.2
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 5.5e-33 145.2 154 50.6
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-33 145.2 221 38.0
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.6e-32 142.1 241 39.8
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.6e-32 142.1 220 39.1
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.9e-31 139.0 169 49.1
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.3e-30 135.6 226 35.4
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.2e-29 133.3 228 35.5
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.8e-29 132.9 239 34.3
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 2.8e-29 132.9 203 40.4
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 6.3e-29 131.7 228 34.2
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.4e-28 130.6 225 37.8
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 7.7e-27 124.8 161 49.1
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-26 124.0 203 36.5
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-25 120.9 233 35.2
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-25 119.0 237 35.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 5.5e-25 118.6 223 34.5
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.4e-25 117.9 123 48.8
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-24 116.7 224 33.5
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-24 116.7 114 50.0
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-24 115.9 211 37.0
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.3e-23 113.2 217 34.1
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 8.8e-23 111.3 233 32.2
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 8.8e-23 111.3 224 32.6
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-22 109.4 230 32.2
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.7e-21 107.1 123 52.8
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-21 106.7 221 32.6
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-20 104.0 225 30.7
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 4.1e-20 102.4 207 34.3
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.5e-19 99.4 176 39.2
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 5.9e-19 98.6 166 34.3
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-18 97.8 225 30.7
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-18 97.8 222 32.0
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-18 97.4 171 36.3
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-18 97.4 171 36.3
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-18 97.4 226 32.3
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 8.5e-18 94.7 159 39.0
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-17 94.4 218 31.7
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.2e-17 92.4 200 33.0
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 4.2e-17 92.4 222 31.1
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 7.2e-17 91.7 126 38.9
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 8.0e-16 88.2 208 31.7
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.4e-15 87.4 239 29.7
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-15 86.3 193 31.6
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.0e-15 85.9 126 40.5
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.0e-15 85.9 126 45.2
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 6.7e-15 85.1 126 34.9
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-14 84.0 171 33.3
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-14 83.6 168 33.3
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-13 80.9 112 42.0
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 2.8e-13 79.7 217 29.5
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 4.8e-13 79.0 132 37.1
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 4.8e-13 79.0 217 27.6
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 9.1e-12 74.7 93 44.1
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-11 73.6 207 30.4
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 2.0e-11 73.6 170 30.6
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-09 65.5 156 30.8
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 1.4e-07 60.8 108 34.3
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 2.3e-07 60.1 59 49.2
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 3.4e-06 56.2 73 47.9
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 5.7e-06 55.5 64 45.3


User provided reference genes

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