Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.3e-42 176.0 90 100.0
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 8.6e-39 163.3 90 90.0
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 4.3e-38 161.0 88 88.6
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 2.1e-37 158.7 90 83.3
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 2.8e-37 158.3 87 88.5
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 3.6e-37 157.9 90 83.3
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 4.7e-37 157.5 90 85.6
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 6.2e-37 157.1 90 82.2
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 6.2e-37 157.1 90 86.7
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 6.2e-37 157.1 90 86.7
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 8.0e-37 156.8 90 82.2
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 8.0e-37 156.8 90 86.7
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.1e-36 156.4 90 82.2
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 1.4e-36 156.0 90 82.2
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.4e-36 156.0 90 86.7
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.4e-36 156.0 87 86.2
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 1.8e-36 155.6 90 81.1
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 1.8e-36 155.6 90 81.1
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 1.8e-36 155.6 90 81.1
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 1.8e-36 155.6 87 85.1
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 2.3e-36 155.2 90 82.2
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 3.1e-36 154.8 90 80.0
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 4.0e-36 154.5 90 84.4
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 5.2e-36 154.1 90 82.2
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 5.2e-36 154.1 90 82.2
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 6.8e-36 153.7 90 80.0
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 6.8e-36 153.7 90 82.2
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 8.9e-36 153.3 90 80.0
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 8.9e-36 153.3 90 83.3
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.2e-35 152.9 90 78.9
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.2e-35 152.9 90 80.0
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 1.2e-35 152.9 86 84.9
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.2e-35 152.9 90 83.3
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.5e-35 152.5 90 83.3
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 2.0e-35 152.1 87 81.6
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.0e-35 152.1 87 81.6
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 2.0e-35 152.1 90 81.1
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.6e-35 151.8 90 77.8
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 3.4e-35 151.4 87 85.1
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.4e-35 151.4 90 82.2
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 3.4e-35 151.4 90 82.2
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 4.4e-35 151.0 90 77.8
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 4.4e-35 151.0 87 80.5
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 5.8e-35 150.6 90 78.9
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 76.7
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 78.9
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 1.3e-34 149.4 90 80.0
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 1.3e-34 149.4 90 76.7
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 1.7e-34 149.1 90 80.0
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 2.2e-34 148.7 90 80.0
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 3.7e-34 147.9 90 76.7
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 3.7e-34 147.9 90 77.8
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 3.7e-34 147.9 88 80.7
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.9e-34 147.5 97 73.2
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 4.9e-34 147.5 90 78.9
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 4.9e-34 147.5 90 80.0
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 4.9e-34 147.5 90 76.7
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 8.3e-34 146.7 84 84.5
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.1e-33 146.4 91 76.9
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.1e-33 146.4 91 76.9
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 78.9
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.4e-33 146.0 89 76.4
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.4e-33 146.0 89 80.9
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 75.6
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.9e-33 145.6 88 76.1
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 73.3
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 77.8
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.4e-33 145.2 86 77.9
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 78.9
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 3.2e-33 144.8 90 75.6
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.2e-33 144.8 90 75.6
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 3.2e-33 144.8 89 78.7
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 74.4
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 9.2e-33 143.3 87 78.2
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 9.2e-33 143.3 87 78.2
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 75.6
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.2e-32 142.9 91 75.8
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.2e-32 142.9 88 75.0
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.2e-32 142.9 88 72.7
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 73.3
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 73.3
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.1e-32 142.1 100 70.0
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 73.3
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 4.6e-32 141.0 88 72.7
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 4.6e-32 141.0 87 77.0
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 75.6
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 6.0e-32 140.6 88 72.7
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 74.4
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 68.9
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 2.3e-31 138.7 88 68.2
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 3.0e-31 138.3 94 71.3
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 89 76.4
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 6.6e-31 137.1 86 74.4
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 5.6e-30 134.0 124 58.1
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 7.3e-30 133.7 88 69.3
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 6.2e-29 130.6 84 75.0
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.4e-28 129.4 97 70.1
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 4.0e-28 127.9 90 68.9
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 1.2e-27 126.3 87 69.0
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 2.0e-27 125.6 72 80.6
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.9e-26 121.7 86 69.8
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 3.7e-26 121.3 86 69.8
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 6.4e-26 120.6 70 78.6
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.4e-25 119.4 70 80.0
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.4e-25 118.6 69 81.2
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 3.2e-25 118.2 70 82.9
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 4.1e-25 117.9 71 84.5
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.6e-24 115.9 68 79.4
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 6.0e-24 114.0 66 80.3
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 5.1e-23 110.9 63 81.0
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 1.5e-22 109.4 68 76.5
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 8.1e-21 103.6 60 81.7
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 2.4e-20 102.1 69 68.1
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 3.1e-20 101.7 57 82.5
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 1.5e-19 99.4 72 63.9
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 3.4e-19 98.2 77 68.8
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 4.4e-19 97.8 71 73.2
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 6.4e-18 94.0 89 53.9
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 7.1e-17 90.5 51 86.3
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 1.2e-13 79.7 93 45.2
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 4.0e-12 74.7 89 44.9
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 2.0e-11 72.4 53 67.9
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 6.4e-10 67.4 47 68.1
AUR62016546 Chenopodium quinoa HOM05D006090 ORTHO05D007600 3.9e-07 58.2 51 58.8
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 4.3e-06 54.7 41 65.9


User provided reference genes

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