Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 3.7e-103 378.3 198 100.0
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 4.6e-85 318.2 198 82.8
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 4.6e-85 318.2 198 82.8
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.8e-81 306.2 198 80.3
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 6.9e-81 304.3 198 81.3
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 1.5e-80 303.1 196 81.6
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 4.4e-80 301.6 197 79.7
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.3e-79 300.1 199 80.4
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 1.7e-79 299.7 199 79.9
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 2.9e-79 298.9 198 80.3
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 2.9e-79 298.9 199 80.9
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 9.3e-78 293.9 199 77.9
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 1.6e-77 293.1 197 77.2
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 2.7e-77 292.4 197 78.2
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 7.9e-77 290.8 197 78.7
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 1.3e-76 290.0 199 78.4
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.7e-76 289.7 197 77.2
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.7e-76 289.7 200 78.0
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 3.9e-76 288.5 201 76.1
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 3.9e-76 288.5 191 78.5
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.5e-75 286.6 196 78.6
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 1.5e-75 286.6 194 79.4
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 1.9e-75 286.2 197 77.7
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 4.3e-75 285.0 196 78.1
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 5.6e-75 284.6 192 76.0
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 5.6e-75 284.6 199 75.9
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 5.6e-75 284.6 191 76.4
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 9.6e-75 283.9 191 77.0
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.6e-74 283.1 198 74.2
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.6e-74 283.1 196 77.6
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 1.6e-74 283.1 196 78.1
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 2.1e-74 282.7 200 76.5
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 2.8e-74 282.3 199 75.9
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 2.8e-74 282.3 199 74.9
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 3.6e-74 282.0 199 76.4
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 3.6e-74 282.0 197 75.6
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 4.8e-74 281.6 198 74.7
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 4.8e-74 281.6 198 74.7
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 4.8e-74 281.6 198 74.7
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 4.8e-74 281.6 198 74.7
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 4.8e-74 281.6 199 76.9
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 4.8e-74 281.6 198 76.8
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 6.2e-74 281.2 197 74.6
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 8.1e-74 280.8 198 74.7
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.1e-73 280.4 198 74.7
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.4e-73 280.0 197 74.1
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 1.8e-73 279.6 197 74.6
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.8e-73 279.6 198 74.2
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 1.8e-73 279.6 199 75.9
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 2.4e-73 279.3 198 74.2
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 2.4e-73 279.3 198 74.2
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.4e-73 279.3 198 74.7
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 3.1e-73 278.9 198 74.2
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.1e-73 278.9 198 74.2
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 3.1e-73 278.9 198 73.7
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 4.0e-73 278.5 198 75.3
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 4.0e-73 278.5 199 75.9
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 5.3e-73 278.1 198 73.2
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 6.9e-73 277.7 198 73.7
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 9.0e-73 277.3 197 74.1
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 2.0e-72 276.2 197 73.1
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 2.0e-72 276.2 198 73.2
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.4e-72 275.4 198 74.2
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 4.5e-72 275.0 198 73.7
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 4.5e-72 275.0 215 70.7
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 5.8e-72 274.6 198 71.2
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 7.6e-72 274.2 197 73.1
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 7.6e-72 274.2 200 71.0
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.3e-71 273.5 197 73.1
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 1.3e-71 273.5 198 71.2
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 3.8e-71 271.9 191 77.0
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 4.9e-71 271.6 159 88.7
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 8.4e-71 270.8 198 73.7
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.4e-70 270.0 198 70.2
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 3.2e-70 268.9 198 71.7
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 5.5e-70 268.1 198 73.2
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-69 266.9 198 73.2
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 6.0e-69 264.6 207 71.5
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 1.3e-68 263.5 199 71.9
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 2.3e-68 262.7 199 70.4
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 3.0e-68 262.3 159 85.5
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 5.1e-68 261.5 200 70.0
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 5.1e-68 261.5 198 71.7
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.1e-67 260.4 200 69.5
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 1.1e-67 260.4 198 72.7
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 3.3e-67 258.8 201 68.7
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 1.3e-66 256.9 148 87.8
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 2.8e-66 255.8 197 68.0
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 2.4e-65 252.7 199 67.8
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 3.1e-65 252.3 198 68.7
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 6.9e-65 251.1 180 71.1
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 9.0e-65 250.8 194 68.6
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 2.0e-64 249.6 198 69.7
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 7.6e-64 247.7 149 88.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 7.6e-64 247.7 198 70.2
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 5.5e-62 241.5 192 68.8
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 2.7e-61 239.2 194 64.4
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 2.1e-58 229.6 196 61.2
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 1.2e-48 197.2 166 58.4
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 1.1e-46 190.7 157 57.3
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 2.0e-43 179.9 141 66.0
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 4.3e-43 178.7 105 85.7
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 3.1e-41 172.6 156 53.2
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.7e-39 166.8 94 92.6
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.8e-39 165.6 180 48.3
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.8e-39 165.6 180 48.3
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.4e-38 163.7 168 48.8
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.4e-38 163.7 168 48.8
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 5.5e-38 161.8 103 79.6
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 3.0e-36 156.0 161 48.4
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 2.0e-35 153.3 103 76.7
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.0e-35 153.3 102 76.5
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 9.1e-33 144.4 114 69.3
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 9.4e-30 134.4 92 76.1
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 5.2e-28 128.6 94 74.5
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 4.4e-27 125.6 86 70.9
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 1.0e-23 114.4 71 80.3
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 2.9e-23 112.8 95 66.3
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 1.0e-20 104.4 157 35.0
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 4.0e-20 102.4 161 34.2
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-18 96.7 88 60.2
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 8.3e-18 94.7 164 31.7
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 5.5e-14 82.0 86 50.0
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 2.0e-11 73.6 156 30.8
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 3.4e-11 72.8 120 42.5
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.8e-09 67.0 44 65.9
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 3.8e-07 59.3 93 37.6
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 6.6e-07 58.5 48 64.6


User provided reference genes

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